| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116872649
Identifier: 116872649
GI number: 116872649
Start: 1233187
End: 1233363
Strand: Direct
Name: 116872649
Synonym: lwe1233
Alternate gene names: NA
Gene position: 1233187-1233363 (Clockwise)
Preceding gene: 116872648
Following gene: 116872650
Centisome position: 43.82
GC content: 37.29
Gene sequence:
>177_bases TTGACAGCTGAGGCGTTTTTATATATTTGCAAACAAACTGGATTGACTATGGACGACTTGGACATGATGACATTGGGTTC TTGTTTGGACTACTTTGCAGAATATGAAGAAGCTCAAAATCCAGACAAAAAGAAAAAAGTCAGAAGAGCATCACAAGCTG ATTTTGATGCGTTTTAG
Upstream 100 bases:
>100_bases CAATTATGGAAATCATGCCAGAAATTGAGGATCTTCTTGCTTCTAGTATTCAGACGAAAAAAAAGTAACTGACACGTCTC AAAATGCCAGCGATGAACCG
Downstream 100 bases:
>100_bases GAGGTGTAATAAAAATGGCTAAAGGTAGAATTCAAGGTATCACAATTGAAGTTGATGGCGATACAAAAGGGTTGAATTCA GCTTTAAAAAGTGTTAACAC
Product: phage-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MTAEAFLYICKQTGLTMDDLDMMTLGSCLDYFAEYEEAQNPDKKKKVRRASQADFDAF
Sequences:
>Translated_58_residues MTAEAFLYICKQTGLTMDDLDMMTLGSCLDYFAEYEEAQNPDKKKKVRRASQADFDAF >Mature_57_residues TAEAFLYICKQTGLTMDDLDMMTLGSCLDYFAEYEEAQNPDKKKKVRRASQADFDAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6667; Mature: 6535
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEAFLYICKQTGLTMDDLDMMTLGSCLDYFAEYEEAQNPDKKKKVRRASQADFDAF CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TAEAFLYICKQTGLTMDDLDMMTLGSCLDYFAEYEEAQNPDKKKKVRRASQADFDAF CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA