Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872643

Identifier: 116872643

GI number: 116872643

Start: 1230912

End: 1231199

Strand: Direct

Name: 116872643

Synonym: lwe1227

Alternate gene names: NA

Gene position: 1230912-1231199 (Clockwise)

Preceding gene: 116872642

Following gene: 116872644

Centisome position: 43.74

GC content: 34.38

Gene sequence:

>288_bases
ATGAGTACAGATACTATTTTAGAACTGGTAAAAGCAAGGGAAGGTATTTCTAGCAATGTTAGAGATACCTATTTGCTTGC
AATTATTGATGGGGTTATTCAAGAACTAGAAAATGAAAAAAGTATTGCCTTGGATGAAAAAGACGCTAATCATTTAATGT
TCGTAGTTGATTACACTTCGTGGAGATATAACAATCGTGATTCTGATGATATGCCACGACATTTACGGTATCGTTTGCAT
AATCTCATTATTCAATATCGAGAGGTGCCTGTTGATGAATTGGAATGA

Upstream 100 bases:

>100_bases
CCCGTCAAGGTAAAGCAAAAAAATCGCGTATTGATGAATTATCTTCTACAAGTAACAAGTTAGGCGAACCACTTATCATT
GAGTTAGAAAGTGATAAGTA

Downstream 100 bases:

>100_bases
TGAAGTGACTTTAGTATCAGAAAAACTTGTTACTGACGAGATAGGAAATCAAATACCAGAGTCAATTGAAACTACAATTC
TATGTGAGAAGAAAAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Related Protein; Phage-Related Protein

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSTDTILELVKAREGISSNVRDTYLLAIIDGVIQELENEKSIALDEKDANHLMFVVDYTSWRYNNRDSDDMPRHLRYRLH
NLIIQYREVPVDELE

Sequences:

>Translated_95_residues
MSTDTILELVKAREGISSNVRDTYLLAIIDGVIQELENEKSIALDEKDANHLMFVVDYTSWRYNNRDSDDMPRHLRYRLH
NLIIQYREVPVDELE
>Mature_94_residues
STDTILELVKAREGISSNVRDTYLLAIIDGVIQELENEKSIALDEKDANHLMFVVDYTSWRYNNRDSDDMPRHLRYRLHN
LIIQYREVPVDELE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11224; Mature: 11093

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTILELVKAREGISSNVRDTYLLAIIDGVIQELENEKSIALDEKDANHLMFVVDYTS
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCC
WRYNNRDSDDMPRHLRYRLHNLIIQYREVPVDELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STDTILELVKAREGISSNVRDTYLLAIIDGVIQELENEKSIALDEKDANHLMFVVDYTS
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCC
WRYNNRDSDDMPRHLRYRLHNLIIQYREVPVDELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA