Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116872631

Identifier: 116872631

GI number: 116872631

Start: 1220291

End: 1220776

Strand: Direct

Name: 116872631

Synonym: lwe1215

Alternate gene names: NA

Gene position: 1220291-1220776 (Clockwise)

Preceding gene: 116872630

Following gene: 116872632

Centisome position: 43.36

GC content: 32.51

Gene sequence:

>486_bases
ATGTTTAAAGTAGATCATAATGATGTTTTCACAAATGGAGTAGAAAATGGTACGTATGAGGTTGTTTTATATAATGCAAA
TGAAGACGCAACAAAAAGTGGTGCTGAGTTCATTAATATTGACTTAATTATTCGCAACGATGTAAATCAAAAATTTCAAA
ATGCACATATCTTTCACAGAGTGTGGAAAGCAAAAGCAACAAATGAATATAGTCAAACGGCATTAAATACAATTGCGAAA
GCTATCCAACTCCCAAATGGAAAAGACTATAACACAGTAAACGAACTGCTACAAGACTTGTTGACTAAAACCTGCCAAGT
TACGGTGAAAAACGAAGAATCTGAATATAATGGACAAGTTTATAAAAATCTAAATGTAAAGGCATGGGCTGAAAGCAAAA
TTACTGGACCTCTACAACATGTGTTTAAAAAGAAAGAAAACGAACCAACACAAGTAGAAATAAGTGAAAACGATTTACCG
TTCTAA

Upstream 100 bases:

>100_bases
TGAATATGCAAAAGAACACAATTATAAAAATGGATGGGCATTCCATCAAGGAAAAGCACGAGGATTTATCAAATAAAAAA
ACGAAAGAAGGAATTTAAAA

Downstream 100 bases:

>100_bases
ACAATGAAAGGAGCGCACAAACGTGTATGAACAAATTCCAGACGAATTAAAAAAATTAAAGCAATGGTGCGCTTTTCAAC
TGGTTTGGGATGAAGAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MFKVDHNDVFTNGVENGTYEVVLYNANEDATKSGAEFINIDLIIRNDVNQKFQNAHIFHRVWKAKATNEYSQTALNTIAK
AIQLPNGKDYNTVNELLQDLLTKTCQVTVKNEESEYNGQVYKNLNVKAWAESKITGPLQHVFKKKENEPTQVEISENDLP
F

Sequences:

>Translated_161_residues
MFKVDHNDVFTNGVENGTYEVVLYNANEDATKSGAEFINIDLIIRNDVNQKFQNAHIFHRVWKAKATNEYSQTALNTIAK
AIQLPNGKDYNTVNELLQDLLTKTCQVTVKNEESEYNGQVYKNLNVKAWAESKITGPLQHVFKKKENEPTQVEISENDLP
F
>Mature_161_residues
MFKVDHNDVFTNGVENGTYEVVLYNANEDATKSGAEFINIDLIIRNDVNQKFQNAHIFHRVWKAKATNEYSQTALNTIAK
AIQLPNGKDYNTVNELLQDLLTKTCQVTVKNEESEYNGQVYKNLNVKAWAESKITGPLQHVFKKKENEPTQVEISENDLP
F

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18394; Mature: 18394

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVDHNDVFTNGVENGTYEVVLYNANEDATKSGAEFINIDLIIRNDVNQKFQNAHIFHR
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHH
VWKAKATNEYSQTALNTIAKAIQLPNGKDYNTVNELLQDLLTKTCQVTVKNEESEYNGQV
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEE
YKNLNVKAWAESKITGPLQHVFKKKENEPTQVEISENDLPF
EECCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MFKVDHNDVFTNGVENGTYEVVLYNANEDATKSGAEFINIDLIIRNDVNQKFQNAHIFHR
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHH
VWKAKATNEYSQTALNTIAKAIQLPNGKDYNTVNELLQDLLTKTCQVTVKNEESEYNGQV
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEE
YKNLNVKAWAESKITGPLQHVFKKKENEPTQVEISENDLPF
EECCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA