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The map label for this gene is ywnA [H]

Identifier: 116872585

GI number: 116872585

Start: 1175463

End: 1175888

Strand: Direct

Name: ywnA [H]

Synonym: lwe1169

Alternate gene names: 116872585

Gene position: 1175463-1175888 (Clockwise)

Preceding gene: 116872582

Following gene: 116872586

Centisome position: 41.77

GC content: 31.46

Gene sequence:

>426_bases
ATGGCCATTTCAACACGTTTTAGCGTTGCCGTTCATATTTTAACATTAATAGATATGAATAAGGAACGTTCAATTACTTC
AGATACAATTGCTGCAAGTGTAAATACAAATCCAGTCGTAATAAGAAGAATCATGAGTAAACTTAAAAAAGCAGGTTTGA
TTCAATCAAGTCCTGGTATTTCAGGTACTTATTTACTAAAAAATGCTACAGAAATTACTTTATACGACATTTATCAAGCA
GTAGAAGTAACCGACAATCTTTTTGATATTCACAAAAATCCTAATCCTAATTGTGAAGTAGGGGCGAATATTCAAGAAAC
ATTAGATACTGTATTTATTCATGCCCAGCAAAAAATGGAAGCAGATTTGAAACGCACTACACTAAGTCAAATTACAGCTG
ATATCAAACAAAAAGCAATCAATTAA

Upstream 100 bases:

>100_bases
TTAGAGAATGCACGTATCAAATAATTAGATAGAAATTATAATAAGAAGTACTTGACAATAAAAACAAATGTAACTATAAT
AGTTACAAAGAGGTGAGGAA

Downstream 100 bases:

>100_bases
CGGGACAATTAAATCCCGTTAATTTCAACCTTTAAATGTAACTGATATGGTTACTAATTAAACTAGGAGGGAAATATTAT
GAAAATAGCAATTATTGGAG

Product: transcriptional regulator Rrf2 family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAISTRFSVAVHILTLIDMNKERSITSDTIAASVNTNPVVIRRIMSKLKKAGLIQSSPGISGTYLLKNATEITLYDIYQA
VEVTDNLFDIHKNPNPNCEVGANIQETLDTVFIHAQQKMEADLKRTTLSQITADIKQKAIN

Sequences:

>Translated_141_residues
MAISTRFSVAVHILTLIDMNKERSITSDTIAASVNTNPVVIRRIMSKLKKAGLIQSSPGISGTYLLKNATEITLYDIYQA
VEVTDNLFDIHKNPNPNCEVGANIQETLDTVFIHAQQKMEADLKRTTLSQITADIKQKAIN
>Mature_140_residues
AISTRFSVAVHILTLIDMNKERSITSDTIAASVNTNPVVIRRIMSKLKKAGLIQSSPGISGTYLLKNATEITLYDIYQAV
EVTDNLFDIHKNPNPNCEVGANIQETLDTVFIHAQQKMEADLKRTTLSQITADIKQKAIN

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15601; Mature: 15470

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISTRFSVAVHILTLIDMNKERSITSDTIAASVNTNPVVIRRIMSKLKKAGLIQSSPGI
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
SGTYLLKNATEITLYDIYQAVEVTDNLFDIHKNPNPNCEVGANIQETLDTVFIHAQQKME
CEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
ADLKRTTLSQITADIKQKAIN
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AISTRFSVAVHILTLIDMNKERSITSDTIAASVNTNPVVIRRIMSKLKKAGLIQSSPGI
CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
SGTYLLKNATEITLYDIYQAVEVTDNLFDIHKNPNPNCEVGANIQETLDTVFIHAQQKME
CEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
ADLKRTTLSQITADIKQKAIN
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]