| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872498
Identifier: 116872498
GI number: 116872498
Start: 1102631
End: 1103164
Strand: Direct
Name: 116872498
Synonym: lwe1082
Alternate gene names: NA
Gene position: 1102631-1103164 (Clockwise)
Preceding gene: 116872497
Following gene: 116872499
Centisome position: 39.18
GC content: 30.52
Gene sequence:
>534_bases ATGTTGATTCCATCATATTTAAAAAACACTGCAAAAGAAATAGGTGTCAATGATTTTCTTAATTTAGAAATTTCAACTGC AAGTAGTGAGGAAACATTTGATATTTTTTATTGCGGAACACTGGAAGTAATTGAGGGAGACCAACTAATTACAGCTACGG ATTTTAAGGTTCCAATAAAGGTTATTGCTAAAAATAATTTAACAAAGGAAGAAATATTACTTTATGATGGCGCCTATTAT GGATATGATAGTATGTTTTGCGATGAATACGATAAGACTGTGATTGAAAATAGAGAACTTAAAAGATTTCCGGTGAATCA TGTTTCTAAAATTAATTTGTCTGTTGGAATCGGAATTGATTATGAAAGTGAAAAAGAGGATTATGAAGTTGATGATAAAG GAAATGTACTACTAATTGATGGCAGACATATACCTTGGGAACAAGTTAAAACGGATGGTTTCGACTACTTAGAAATCAGT GTAAAAGATGAAACGGAAAAATCTCAATTAATTTTGATGGAAGAATTGTCTTAG
Upstream 100 bases:
>100_bases TAATAACAATTCTTGGTTATTTTAAAGAATTTGTTCTAAGTGAATGAATGTGGTAAGCTATAATCTGCACATAATAAAAT TTATATTACTAGGAGGAAAA
Downstream 100 bases:
>100_bases AATTGGAGTCAGCTTGAGATTTATATGACGGCTGTGGCTGGAGAAAATAAGAAATATTTAAATGGTGTGAAAAATTATCG GATTCATTTTGATAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLIPSYLKNTAKEIGVNDFLNLEISTASSEETFDIFYCGTLEVIEGDQLITATDFKVPIKVIAKNNLTKEEILLYDGAYY GYDSMFCDEYDKTVIENRELKRFPVNHVSKINLSVGIGIDYESEKEDYEVDDKGNVLLIDGRHIPWEQVKTDGFDYLEIS VKDETEKSQLILMEELS
Sequences:
>Translated_177_residues MLIPSYLKNTAKEIGVNDFLNLEISTASSEETFDIFYCGTLEVIEGDQLITATDFKVPIKVIAKNNLTKEEILLYDGAYY GYDSMFCDEYDKTVIENRELKRFPVNHVSKINLSVGIGIDYESEKEDYEVDDKGNVLLIDGRHIPWEQVKTDGFDYLEIS VKDETEKSQLILMEELS >Mature_177_residues MLIPSYLKNTAKEIGVNDFLNLEISTASSEETFDIFYCGTLEVIEGDQLITATDFKVPIKVIAKNNLTKEEILLYDGAYY GYDSMFCDEYDKTVIENRELKRFPVNHVSKINLSVGIGIDYESEKEDYEVDDKGNVLLIDGRHIPWEQVKTDGFDYLEIS VKDETEKSQLILMEELS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20288; Mature: 20288
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPSYLKNTAKEIGVNDFLNLEISTASSEETFDIFYCGTLEVIEGDQLITATDFKVPIK CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECEEEEEECCEEEEEECCCCEEE VIAKNNLTKEEILLYDGAYYGYDSMFCDEYDKTVIENRELKRFPVNHVSKINLSVGIGID EEECCCCCHHHEEEECCCEECCCCEECCCHHHHHHCCCCCEECCCCCEEEEEEEEEEECC YESEKEDYEVDDKGNVLLIDGRHIPWEQVKTDGFDYLEISVKDETEKSQLILMEELS CCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MLIPSYLKNTAKEIGVNDFLNLEISTASSEETFDIFYCGTLEVIEGDQLITATDFKVPIK CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECEEEEEECCEEEEEECCCCEEE VIAKNNLTKEEILLYDGAYYGYDSMFCDEYDKTVIENRELKRFPVNHVSKINLSVGIGID EEECCCCCHHHEEEECCCEECCCCEECCCHHHHHHCCCCCEECCCCCEEEEEEEEEEECC YESEKEDYEVDDKGNVLLIDGRHIPWEQVKTDGFDYLEISVKDETEKSQLILMEELS CCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA