| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872490
Identifier: 116872490
GI number: 116872490
Start: 1095718
End: 1097601
Strand: Direct
Name: 116872490
Synonym: lwe1074
Alternate gene names: NA
Gene position: 1095718-1097601 (Clockwise)
Preceding gene: 116872489
Following gene: 116872491
Centisome position: 38.94
GC content: 26.96
Gene sequence:
>1884_bases ATGAAACTTTTTTTAAAGACATTTAGAATGATTGGCATAGAAAAAAATTATGGTTTCAACTTTAAAAAAGGATTGAATTT TATTTCTGGTCCTACATCTACAGGAAAAACAACAATTTTTGAATTAATAGATTATGCACTTGGAGCCAAACAACATAAAT CTTACATAGAAGTTGGTCAAAAGTGCACAGATATAGAATTAGAAATAATTTTAGATAATACAACTTATAAAATAAAAAGA CGATTGTTTGATTATAAACTTCCTGTACTTATAGAAATTTTTGACGAAGCGAATCAAAAATTCTTAGAATATGGTATATT TGATGTAGAAAATTCAGATAATGAGAAATCTTTGTCAAGTTTTTTGTTATCTAAATTAGGGTTGGGTGGTGTTAAAATAG CAAATCAAAATTTAAGTTTTAGAGATTTATTTAAGTACTCGTATTTAAAACAAATAGAAATTGACAATGAAGATATTTTA TCATCTGAGAGTAATCCTATGCTTAACAATAAACGTAAATCAACATTTGAGATTATTTTTAATTTTTATGATCAATTATT GGGTGAGTTAAAATCTAAATTGAAAGAGTCTCAAGAAGAATTAAAAAATGAAACTTTACGTTATGAAGGAATTGAGACAT TTTTAAAAACGTCTAATATCGAAAATTTTGAATCTGTTAAACTTAGAAGAAATGAGATAAATCAACAAATTATAGAATTG AAAGCATTGTTAGGAGATAAAAGCAATCATAAAAGTGAGGGGATTTCAAATCCAAAAGTCCAAGAACTAAATGCAACTGT ACGTTTAAAGAAAATTAATTTAAAGAAACACTATGATGAATTAAATGATAAGGAGGAGTATATTGGTAAATTACGTTTAC TTTCCAATCAATATGAAAGTGATATAGCAAAGTTAGATGCAACCATCATGGGAATAAAAGGAGTTAATAAATACGAATTT TTAATTTGTCCTAATTGTATGAAGCCTTTAGAAAAGCATCAAAATAAAGCAAACTGCCATTTATGCGGTGATAATATGGA TGAAATTGTAGAGAACACTCTAATCTTAAAAACCGAAAAAAAGAATACTGTAAAGAAAAGAAATGAGCTTGAAAAACATA TTTCATATGAAGTAACAGAAAAAATCAATCTACAAAAAGTGATTAAAAAACTCAATGATAATCTTAACTCGGATGAGCGA ACCTTAGAAGAATTGACAGAAGAATATGTAAATCCTTTTATCGAAGAAATAAGTTTAATAAATATGATATTAGGTAAATA CTACAAAGAGTTAGATGGTTTGGAAAATAGTTTGCGTTTTATCAAAGAACTAAATCGGTTGACCCTATTACTTTCAGATA AGGAAAAGGAAGTTGATAGGTTAAAAAAACAAATAAAAGGAAAAGCAAATTTAAATGATAAAGTGAGCACTTTCAATTTG TTAAGTACCAGATTTTCCAAAATTTTAAAAGAATTTCAATTTCCTAAACTGGAGAAAGCGTATGTTAATCCTAAGGATTA TTTACCATATGTTAGAGAAAGAAAATATAATAGCTTAGGTAGCTTAGGTGCAGTGACATTGATTACAATGGCTTATTATC TGTCAATATTTGTTGAAACAGAAGACGATACGTACAATCATTTGAATTTATTAATGATTGATACTCCAAGAAAAAATCTT GGAACTTCATCCCAAAATGAAGAATTCCAAGATGAAGAAATATATAATTCGGTCATAAAATATTTTATTTCTTTAGATAA AACATCATCAGAGGAGATGCAGCTCCTTATAATAAATAATGGCTATCCTGATTTCTTACCAAAGAAAGATTTAATTGTTG AATTTTCCTCTGACGGACGAGTTGGGCTAATTGATGATATATAA
Upstream 100 bases:
>100_bases TTGTCAGTGAGTATATTAATAAAAAAATTTGTAAATTATCTAATAAAGCTATTACAGAAGACATAGAGAAAATACTTTTG AAAAAGAGAGGATATAGATA
Downstream 100 bases:
>100_bases ATAGTGTTGATTTTGTAAATAAAAAAGAAGTAATAACCAAATCAATTAAACTGGTCATTACTTCTTTTTACAAATTAGAT AGAAACATTTTGTTATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MKLFLKTFRMIGIEKNYGFNFKKGLNFISGPTSTGKTTIFELIDYALGAKQHKSYIEVGQKCTDIELEIILDNTTYKIKR RLFDYKLPVLIEIFDEANQKFLEYGIFDVENSDNEKSLSSFLLSKLGLGGVKIANQNLSFRDLFKYSYLKQIEIDNEDIL SSESNPMLNNKRKSTFEIIFNFYDQLLGELKSKLKESQEELKNETLRYEGIETFLKTSNIENFESVKLRRNEINQQIIEL KALLGDKSNHKSEGISNPKVQELNATVRLKKINLKKHYDELNDKEEYIGKLRLLSNQYESDIAKLDATIMGIKGVNKYEF LICPNCMKPLEKHQNKANCHLCGDNMDEIVENTLILKTEKKNTVKKRNELEKHISYEVTEKINLQKVIKKLNDNLNSDER TLEELTEEYVNPFIEEISLINMILGKYYKELDGLENSLRFIKELNRLTLLLSDKEKEVDRLKKQIKGKANLNDKVSTFNL LSTRFSKILKEFQFPKLEKAYVNPKDYLPYVRERKYNSLGSLGAVTLITMAYYLSIFVETEDDTYNHLNLLMIDTPRKNL GTSSQNEEFQDEEIYNSVIKYFISLDKTSSEEMQLLIINNGYPDFLPKKDLIVEFSSDGRVGLIDDI
Sequences:
>Translated_627_residues MKLFLKTFRMIGIEKNYGFNFKKGLNFISGPTSTGKTTIFELIDYALGAKQHKSYIEVGQKCTDIELEIILDNTTYKIKR RLFDYKLPVLIEIFDEANQKFLEYGIFDVENSDNEKSLSSFLLSKLGLGGVKIANQNLSFRDLFKYSYLKQIEIDNEDIL SSESNPMLNNKRKSTFEIIFNFYDQLLGELKSKLKESQEELKNETLRYEGIETFLKTSNIENFESVKLRRNEINQQIIEL KALLGDKSNHKSEGISNPKVQELNATVRLKKINLKKHYDELNDKEEYIGKLRLLSNQYESDIAKLDATIMGIKGVNKYEF LICPNCMKPLEKHQNKANCHLCGDNMDEIVENTLILKTEKKNTVKKRNELEKHISYEVTEKINLQKVIKKLNDNLNSDER TLEELTEEYVNPFIEEISLINMILGKYYKELDGLENSLRFIKELNRLTLLLSDKEKEVDRLKKQIKGKANLNDKVSTFNL LSTRFSKILKEFQFPKLEKAYVNPKDYLPYVRERKYNSLGSLGAVTLITMAYYLSIFVETEDDTYNHLNLLMIDTPRKNL GTSSQNEEFQDEEIYNSVIKYFISLDKTSSEEMQLLIINNGYPDFLPKKDLIVEFSSDGRVGLIDDI >Mature_627_residues MKLFLKTFRMIGIEKNYGFNFKKGLNFISGPTSTGKTTIFELIDYALGAKQHKSYIEVGQKCTDIELEIILDNTTYKIKR RLFDYKLPVLIEIFDEANQKFLEYGIFDVENSDNEKSLSSFLLSKLGLGGVKIANQNLSFRDLFKYSYLKQIEIDNEDIL SSESNPMLNNKRKSTFEIIFNFYDQLLGELKSKLKESQEELKNETLRYEGIETFLKTSNIENFESVKLRRNEINQQIIEL KALLGDKSNHKSEGISNPKVQELNATVRLKKINLKKHYDELNDKEEYIGKLRLLSNQYESDIAKLDATIMGIKGVNKYEF LICPNCMKPLEKHQNKANCHLCGDNMDEIVENTLILKTEKKNTVKKRNELEKHISYEVTEKINLQKVIKKLNDNLNSDER TLEELTEEYVNPFIEEISLINMILGKYYKELDGLENSLRFIKELNRLTLLLSDKEKEVDRLKKQIKGKANLNDKVSTFNL LSTRFSKILKEFQFPKLEKAYVNPKDYLPYVRERKYNSLGSLGAVTLITMAYYLSIFVETEDDTYNHLNLLMIDTPRKNL GTSSQNEEFQDEEIYNSVIKYFISLDKTSSEEMQLLIINNGYPDFLPKKDLIVEFSSDGRVGLIDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72962; Mature: 72962
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFLKTFRMIGIEKNYGFNFKKGLNFISGPTSTGKTTIFELIDYALGAKQHKSYIEVGQ CHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC KCTDIELEIILDNTTYKIKRRLFDYKLPVLIEIFDEANQKFLEYGIFDVENSDNEKSLSS CCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHH FLLSKLGLGGVKIANQNLSFRDLFKYSYLKQIEIDNEDILSSESNPMLNNKRKSTFEIIF HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHH NFYDQLLGELKSKLKESQEELKNETLRYEGIETFLKTSNIENFESVKLRRNEINQQIIEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KALLGDKSNHKSEGISNPKVQELNATVRLKKINLKKHYDELNDKEEYIGKLRLLSNQYES HHHHCCCCCCCCCCCCCCCHHHCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHH DIAKLDATIMGIKGVNKYEFLICPNCMKPLEKHQNKANCHLCGDNMDEIVENTLILKTEK HHHHHHHHHEECCCCCCEEEEECCHHHHHHHHCCCCCCEEECCCCHHHHHCCCEEEEECC KNTVKKRNELEKHISYEVTEKINLQKVIKKLNDNLNSDERTLEELTEEYVNPFIEEISLI HHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NMILGKYYKELDGLENSLRFIKELNRLTLLLSDKEKEVDRLKKQIKGKANLNDKVSTFNL HHHHHHHHHHHHCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHH LSTRFSKILKEFQFPKLEKAYVNPKDYLPYVRERKYNSLGSLGAVTLITMAYYLSIFVET HHHHHHHHHHHHCCCCCHHHCCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEC EDDTYNHLNLLMIDTPRKNLGTSSQNEEFQDEEIYNSVIKYFISLDKTSSEEMQLLIINN CCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC GYPDFLPKKDLIVEFSSDGRVGLIDDI CCCCCCCCCCEEEEECCCCCEECCCCC >Mature Secondary Structure MKLFLKTFRMIGIEKNYGFNFKKGLNFISGPTSTGKTTIFELIDYALGAKQHKSYIEVGQ CHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC KCTDIELEIILDNTTYKIKRRLFDYKLPVLIEIFDEANQKFLEYGIFDVENSDNEKSLSS CCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHH FLLSKLGLGGVKIANQNLSFRDLFKYSYLKQIEIDNEDILSSESNPMLNNKRKSTFEIIF HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHH NFYDQLLGELKSKLKESQEELKNETLRYEGIETFLKTSNIENFESVKLRRNEINQQIIEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KALLGDKSNHKSEGISNPKVQELNATVRLKKINLKKHYDELNDKEEYIGKLRLLSNQYES HHHHCCCCCCCCCCCCCCCHHHCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHH DIAKLDATIMGIKGVNKYEFLICPNCMKPLEKHQNKANCHLCGDNMDEIVENTLILKTEK HHHHHHHHHEECCCCCCEEEEECCHHHHHHHHCCCCCCEEECCCCHHHHHCCCEEEEECC KNTVKKRNELEKHISYEVTEKINLQKVIKKLNDNLNSDERTLEELTEEYVNPFIEEISLI HHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NMILGKYYKELDGLENSLRFIKELNRLTLLLSDKEKEVDRLKKQIKGKANLNDKVSTFNL HHHHHHHHHHHHCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHH LSTRFSKILKEFQFPKLEKAYVNPKDYLPYVRERKYNSLGSLGAVTLITMAYYLSIFVET HHHHHHHHHHHHCCCCCHHHCCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEC EDDTYNHLNLLMIDTPRKNLGTSSQNEEFQDEEIYNSVIKYFISLDKTSSEEMQLLIINN CCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC GYPDFLPKKDLIVEFSSDGRVGLIDDI CCCCCCCCCCEEEEECCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA