| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872454
Identifier: 116872454
GI number: 116872454
Start: 1051415
End: 1051945
Strand: Direct
Name: 116872454
Synonym: lwe1036
Alternate gene names: NA
Gene position: 1051415-1051945 (Clockwise)
Preceding gene: 116872453
Following gene: 116872455
Centisome position: 37.36
GC content: 35.59
Gene sequence:
>531_bases ATGGATATTAGTCAAATTAAAGCAGAAACAGTAACACCAGAAGTGGGAATACATGTAGGAGATAGCGCGGCTCCGGTTAA AGTAATGTCATTTGTTAATCTACGTTGTCCTTTCTGTCGTGAATGGAACGAAAAATCACAAGACGTGCTGACGGAATTTA TTCAAGCAGGAAAAATAGAATTAATTATTAAACCTTTTGATAAAGAAAAAGAATCTTTGCAACGCGGGAATGTAACGCAC CGTTACTTAGATTATTCTAAACCAGAAGAAACTCGTGAAAATATCAATAAAATTTATAGTACGCAAGATGAATGGGGCAG CCTTTCTCTTACCGAAGTAGCTGCTTATATGGAATCCGAGTTAGGATTAACAGAACAAGGCAACAAAGCTGTTTCAGAAA AAATTATTGCAGAAGCAAATACTGCAAATATTGTCTTTGTACCCACTGTTATTGTAGGTAAACACATTTTCGATGAGCAT ATTAGTCCCGAAGAATTACGCACATTATTGAACGAAGAACTTGCTAAATAA
Upstream 100 bases:
>100_bases AAGCAAGTGGCTATTCCGCTTATAAAGTGATGCAACTCGTAAAAAACGCAACTACAAGCAAAATAAAAATGCAACCATAA TTAAGAGGAGGAATTTTTTC
Downstream 100 bases:
>100_bases TAAATAAGAAGAATCATGTAGATGAAATCAAATGTAGCCATTTTGTTTCATTCGCATGATTCTTTTTTTGTAGAAAATGA AAAACTTCATGCAAACTCCA
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDISQIKAETVTPEVGIHVGDSAAPVKVMSFVNLRCPFCREWNEKSQDVLTEFIQAGKIELIIKPFDKEKESLQRGNVTH RYLDYSKPEETRENINKIYSTQDEWGSLSLTEVAAYMESELGLTEQGNKAVSEKIIAEANTANIVFVPTVIVGKHIFDEH ISPEELRTLLNEELAK
Sequences:
>Translated_176_residues MDISQIKAETVTPEVGIHVGDSAAPVKVMSFVNLRCPFCREWNEKSQDVLTEFIQAGKIELIIKPFDKEKESLQRGNVTH RYLDYSKPEETRENINKIYSTQDEWGSLSLTEVAAYMESELGLTEQGNKAVSEKIIAEANTANIVFVPTVIVGKHIFDEH ISPEELRTLLNEELAK >Mature_176_residues MDISQIKAETVTPEVGIHVGDSAAPVKVMSFVNLRCPFCREWNEKSQDVLTEFIQAGKIELIIKPFDKEKESLQRGNVTH RYLDYSKPEETRENINKIYSTQDEWGSLSLTEVAAYMESELGLTEQGNKAVSEKIIAEANTANIVFVPTVIVGKHIFDEH ISPEELRTLLNEELAK
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19881; Mature: 19881
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISQIKAETVTPEVGIHVGDSAAPVKVMSFVNLRCPFCREWNEKSQDVLTEFIQAGKIE CCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCEE LIIKPFDKEKESLQRGNVTHRYLDYSKPEETRENINKIYSTQDEWGSLSLTEVAAYMESE EEEECCCCHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LGLTEQGNKAVSEKIIAEANTANIVFVPTVIVGKHIFDEHISPEELRTLLNEELAK CCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDISQIKAETVTPEVGIHVGDSAAPVKVMSFVNLRCPFCREWNEKSQDVLTEFIQAGKIE CCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCEE LIIKPFDKEKESLQRGNVTHRYLDYSKPEETRENINKIYSTQDEWGSLSLTEVAAYMESE EEEECCCCHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LGLTEQGNKAVSEKIIAEANTANIVFVPTVIVGKHIFDEHISPEELRTLLNEELAK CCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA