Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116872175

Identifier: 116872175

GI number: 116872175

Start: 781500

End: 781961

Strand: Direct

Name: 116872175

Synonym: lwe0755

Alternate gene names: NA

Gene position: 781500-781961 (Clockwise)

Preceding gene: 116872170

Following gene: 116872178

Centisome position: 27.77

GC content: 30.95

Gene sequence:

>462_bases
ATGGTAGGAATTAATACACATACAGAAAATATTAGTGAATTATTAAAAACATATTGGTCCATACAGCGGATTTCAGCGGG
ATATGCTGATCAAAATGCGGCTAGTTTAGGTTTAACTATTCAACAACTTGCTATGATAAATGTGATTTATAGCACCCCAG
GAATTTCAGTGGCAGATTTAACTAAACGATTAATTATTACTGGAAGTTCTGCAGCAGCCAATGTGGATGGGCTAATTAGC
TTAGGTTTAGTGATGAAATTAAATAAAACTATTCCAAATGATAGTATGGATCTTACATTAAAACTTTCAAAAAAAGGAGA
AGACTTATCAAAACGTTCGACTGCAAATGCCTTTATGTATAAAGCAATGATGAAAGTTTTCGAAAATTTATCCGAAAATG
AAATAGAGGACTTAATTCGTTTAAATAAAAAAGTCGAAACATTACTGAAAAAAAGCAAATAA

Upstream 100 bases:

>100_bases
AGCAACTATAAAAACGTATTATAAATATATTTTTTTCGTAAATTTGATTGAGTTTTTTGCATAAAGTGCGTAAAATAGGT
TGTAAGAGGGAGGTTGGATG

Downstream 100 bases:

>100_bases
AAACATCTCCTGTATCATTCAAGTAAAAATGAATGAACAAGAGATGTTTTTTTATTTTTCATCAAATTTGCAGTCTTCCA
GTGGAATGACTTTTGTTTTA

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MVGINTHTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLIS
LGLVMKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLSENEIEDLIRLNKKVETLLKKSK

Sequences:

>Translated_153_residues
MVGINTHTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLIS
LGLVMKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLSENEIEDLIRLNKKVETLLKKSK
>Mature_153_residues
MVGINTHTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLIS
LGLVMKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLSENEIEDLIRLNKKVETLLKKSK

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16824; Mature: 16824

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGINTHTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TKRLIITGSSAAANVDGLISLGLVMKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMY
HHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
KAMMKVFENLSENEIEDLIRLNKKVETLLKKSK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVGINTHTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TKRLIITGSSAAANVDGLISLGLVMKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMY
HHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
KAMMKVFENLSENEIEDLIRLNKKVETLLKKSK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA