| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872169
Identifier: 116872169
GI number: 116872169
Start: 776464
End: 777120
Strand: Direct
Name: 116872169
Synonym: lwe0749
Alternate gene names: NA
Gene position: 776464-777120 (Clockwise)
Preceding gene: 116872167
Following gene: 116872170
Centisome position: 27.59
GC content: 36.07
Gene sequence:
>657_bases ATGAAAAAAGGGTTATTTAGTTTGGTACTTGTTCTTGCAATGGTACTTGTTTTGAGCGCATGTGGTGGCGCTTCAAGAGT AGAACCAAAAGAAGCAGGAGAAATTACAGTTAATTCTGTCGTTTATAACAAAGACACGGACAAAGTAAAAGATGTATATG GTGAAGACGGTAGTAAATTCGAAAAAGAATTTGAAACTAGCTTCAAAGAAAGTTTCATCAATACATTCACCGCTAGCTTT TCAACGGATGTTAACTTAGACAAACAGGTAGACGATTTCTATAATGCACTTCGTAAACAAGTAAATGAAAAGACATCGTA TACTACTAAAGTAACAAATGACGATAAAGAAAGTCCAGAAATTCAGTTTTCCGTTAAAGGCTTAAATATGAAAGGTGTTC AAACAGAGCTAGTAGAAGAATTAACAAAAGCAGCAACCGCTGACCCATCTCTAGCAACTGACAACCAAAAAATGGCTGAA AAAACTATGGAAATCTATACAAAAGCTGTTCAAAATGCAGACGCAGTATCAGAAGCAAAAACTGTCACACTTAAACTAAA AGCAGATCCAGATGATGACTCCTTATGGAAAATGCAAAACGACATGGCATTCATGCAAGAACTAACAACTGCATTCTTCA TGGGCGGCATGAACTAA
Upstream 100 bases:
>100_bases AAATTATGTACAAATTATGACACTTTTTGTAAAATAGTTGGCATTTTAATCTACTTTCTGTACAATTAGAATGAATTCGA AACAAGAAAGGGAGATTAAA
Downstream 100 bases:
>100_bases GATTTTTATAGACACCAGCAACTTTCGGGTTGTTGGTGTTTTTTTGTTTCCAAGAATAAATGTTATAATAACACTAAAAT TTAATAATGGGAGGCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKKGLFSLVLVLAMVLVLSACGGASRVEPKEAGEITVNSVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFINTFTASF STDVNLDKQVDDFYNALRKQVNEKTSYTTKVTNDDKESPEIQFSVKGLNMKGVQTELVEELTKAATADPSLATDNQKMAE KTMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMQNDMAFMQELTTAFFMGGMN
Sequences:
>Translated_218_residues MKKGLFSLVLVLAMVLVLSACGGASRVEPKEAGEITVNSVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFINTFTASF STDVNLDKQVDDFYNALRKQVNEKTSYTTKVTNDDKESPEIQFSVKGLNMKGVQTELVEELTKAATADPSLATDNQKMAE KTMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMQNDMAFMQELTTAFFMGGMN >Mature_218_residues MKKGLFSLVLVLAMVLVLSACGGASRVEPKEAGEITVNSVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFINTFTASF STDVNLDKQVDDFYNALRKQVNEKTSYTTKVTNDDKESPEIQFSVKGLNMKGVQTELVEELTKAATADPSLATDNQKMAE KTMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMQNDMAFMQELTTAFFMGGMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24192; Mature: 24192
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLFSLVLVLAMVLVLSACGGASRVEPKEAGEITVNSVVYNKDTDKVKDVYGEDGSKF CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHH EKEFETSFKESFINTFTASFSTDVNLDKQVDDFYNALRKQVNEKTSYTTKVTNDDKESPE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC IQFSVKGLNMKGVQTELVEELTKAATADPSLATDNQKMAEKTMEIYTKAVQNADAVSEAK EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCE TVTLKLKADPDDDSLWKMQNDMAFMQELTTAFFMGGMN EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKGLFSLVLVLAMVLVLSACGGASRVEPKEAGEITVNSVVYNKDTDKVKDVYGEDGSKF CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHH EKEFETSFKESFINTFTASFSTDVNLDKQVDDFYNALRKQVNEKTSYTTKVTNDDKESPE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC IQFSVKGLNMKGVQTELVEELTKAATADPSLATDNQKMAEKTMEIYTKAVQNADAVSEAK EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCE TVTLKLKADPDDDSLWKMQNDMAFMQELTTAFFMGGMN EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA