Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116872117

Identifier: 116872117

GI number: 116872117

Start: 723756

End: 724154

Strand: Direct

Name: 116872117

Synonym: lwe0697

Alternate gene names: NA

Gene position: 723756-724154 (Clockwise)

Preceding gene: 116872116

Following gene: 116872120

Centisome position: 25.72

GC content: 38.6

Gene sequence:

>399_bases
ATGAATCCAAGAAAATCAGAATTCGTTCTAACATTAATCGCAGGAATCACTGGTATTATTGCTGGAATTACTGGGATTGC
AGGCGGAGGGCTTCTAGCTGCTTTTTCAGGAAGTGAAGAACTATCTAATGCAGCATCTTTAACTACTGCTGATAGCGAAG
CACTTGCTGCTGCAGGTGGTTTAACAGTTGTTTTTTCCGTGATTGCATTAGTTGTTGGTATTGCTTTGATTATTTTCGCT
GTATTAATTAAGCGTAATGCAAAGTTATTTGGAATTTTAACGCTAGTAGCTGGTGTTGGAGGTTTCTTATTGGTAGGCTT
ACTTTGGATCGTTCCTGGTATACTTGCTATTATTGCTGGTATTATGTGCCTTGCAAGAAAAGTTCCAACTTTCGAATAG

Upstream 100 bases:

>100_bases
TAAAGAGAAAATTTTGATAAAACTATGCAAATTGTTTATAGATTCTAGAAAAATTAATGTTATAATATAAATTGACTATT
AAAAAGGGAGGTTTTATATT

Downstream 100 bases:

>100_bases
CCATAATTAGAGAATAGACTGTAACAAGATGAGAAATCATTTTGGTTACAGTCTATTTTTAAACCTACAAATATTAATCT
ATCTAAGCAATAGTCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAAFSGSEELSNAASLTTADSEALAAAGGLTVVFSVIALVVGIALIIFA
VLIKRNAKLFGILTLVAGVGGFLLVGLLWIVPGILAIIAGIMCLARKVPTFE

Sequences:

>Translated_132_residues
MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAAFSGSEELSNAASLTTADSEALAAAGGLTVVFSVIALVVGIALIIFA
VLIKRNAKLFGILTLVAGVGGFLLVGLLWIVPGILAIIAGIMCLARKVPTFE
>Mature_132_residues
MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAAFSGSEELSNAASLTTADSEALAAAGGLTVVFSVIALVVGIALIIFA
VLIKRNAKLFGILTLVAGVGGFLLVGLLWIVPGILAIIAGIMCLARKVPTFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13219; Mature: 13219

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAAFSGSEELSNAASLTTADSEALAAAGG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHCH
LTVVFSVIALVVGIALIIFAVLIKRNAKLFGILTLVAGVGGFLLVGLLWIVPGILAIIAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMCLARKVPTFE
HHHHHHCCCCCC
>Mature Secondary Structure
MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAAFSGSEELSNAASLTTADSEALAAAGG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHCH
LTVVFSVIALVVGIALIIFAVLIKRNAKLFGILTLVAGVGGFLLVGLLWIVPGILAIIAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMCLARKVPTFE
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA