| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is glmS [H]
Identifier: 116872115
GI number: 116872115
Start: 720936
End: 722741
Strand: Direct
Name: glmS [H]
Synonym: lwe0695
Alternate gene names: 116872115
Gene position: 720936-722741 (Clockwise)
Preceding gene: 116872113
Following gene: 116872116
Centisome position: 25.62
GC content: 37.76
Gene sequence:
>1806_bases ATGTGTGGAATTGTTGGATATATTGGAACAAACAATGCAAAAGGTATTTTATTAGAAGGACTTGAAAAATTAGAATATCG TGGTTATGATTCAGCTGGAATCGCCTTACAAAATAAGGACATAGTCACAGTTGTTAAAGAAAAAGGACGGATTGCTGATC TCGCAAGTCTAGTACCAAGTGACGCTTTTGGAACTACTGGAATTGGTCATACTCGCTGGGCAACTCATGGTAAACCAAAT CACGAGAACGCCCACCCGCACCAAAGCAAATCTGGTCGTTTTACTATCGTTCATAATGGCGTAATCGAAAACTATTCCCT TTTAAAAGAAGAATATTTACAAAATCATTCATTTATTAGTGACACAGATACAGAAGTAATCGTACAGCTCATTGAATTAT TTGCAGAAGAACTTTCTACAAAAGAAGCCTTCAAGAAAGCTCTTTCTTTACTTCACGGTTCATACGCAATTTGTTTGATT GACCAAACTGATACAGAAACTTTGTACGCAGCAAAAAACAAAAGTCCATTATTAATCGGAAAAGGCGAAAACTTCAACGT TATCGCAAGTGATGCAATGGCAGTTCTTAAAGAAACTGACCAATTCGTGGAAATCATGGATAAAGAAATTGTTATCGTAA CAAAAGACGGATTCACTTTAGAAACACTAGAAGGGGAAGAAGTTATTCGTGCGAGCTATACTGCAGAATTAGACGCATCT GATATCGAAAAAGGCACTTACCCACACTATATGTTAAAAGAAATCGACGAACAACCAGCTGTTACACGCAAAATCATTCA AGCTTATCAAAACGAGGTTGGTGAAATTAACGTCAATCAAACTATTATTGATGAAATTTTATCTTCTGACCGTATTCATA TTGTAGCTTGTGGTACGAGTTATCATGCTGGACTAGTTGGGAAAAACTTAATCGAAAAAATGGCCAAGATTCCTGTAGAA GTACATGTTTCCAGTGAGTTTGGTTATAATTTACCACTAATGTCTAAAAAACCATTATTCATTTTTATTACACAAAGTGG GGAAACTGCCGACAGCCGTCAATGTCTTGTAAAAGTGAAAGAACTTGGCTACCGCACTTTAACATTAACAAACGTACCAG GTTCCACGCTGGATCGTGAAGCAGATCATTCCATGTATTTATATGCAGGACCAGAAATTGCTGTTGCATCCACAAAAGCT TATACAGCCCAGATTTCTGTTTTGGCAGTACTTGCGGTGTCACTTGGTCGTGAATTGGGTGATGCAGAAGCACTTAATAT TAATTTAGCTGCTGAATTAGGTATAGTTGCAACTGCAATGGAAGCAATGGTTTCTAGCAAAGAAGTTATTGAACATATTG CGGGTGAATATTTAGCCACTTCTCGAAATGCCTTTTTCTTAGGTAGAAATATTGATTACTTTGTTGCAATGGAAGCTGCC TTAAAATTAAAAGAAATTTCTTATATCCAAGCAGAAGGTTTTGCAAGTGGAGAATTGAAACACGGAACTATTGCGTTAAT TGAAGACGGGACACCAGTTTTAACGCTTATCACACAAGAATCTATTAACTGGAATATTCGTGGGAATGTTAATGAAGTAT TAGCACGTGGAGCAAAAACTTGTGTGTTCGCTATGGAAAACGTTGCGCAACCGGGCGACCGCTTTGTCATTCCACAAGTA CATCCTTTGTTAACGCCACTTGCAAGCGTAATTCCTTGCCAGTTACTTGCTTACTATGCCGCGCTTCACCGTGACTGTGA CGTTGATAAACCAAGAAACTTAGCAAAAAGTGTTACTGTAGAATAA
Upstream 100 bases:
>100_bases TAATGAAATATGTGTAAAAACCCTCCAAGGAAACAAAAAAATATAGAGGGCTGGAAATTGGATAAGTCTGCCCTCAAGTT AATTATTGGAGGAATTTATT
Downstream 100 bases:
>100_bases CTTTTTTAAGACCTTTTCGAAAATGGAAAAGGTCTTTTTTTTATGTAATCAATAAATTTGCACGCCTCCTGTGTTATGCT ATAAACTGGAGAAGAATGGG
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDIVTVVKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPN HENAHPHQSKSGRFTIVHNGVIENYSLLKEEYLQNHSFISDTDTEVIVQLIELFAEELSTKEAFKKALSLLHGSYAICLI DQTDTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDQFVEIMDKEIVIVTKDGFTLETLEGEEVIRASYTAELDAS DIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEVGEINVNQTIIDEILSSDRIHIVACGTSYHAGLVGKNLIEKMAKIPVE VHVSSEFGYNLPLMSKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPEIAVASTKA YTAQISVLAVLAVSLGRELGDAEALNINLAAELGIVATAMEAMVSSKEVIEHIAGEYLATSRNAFFLGRNIDYFVAMEAA LKLKEISYIQAEGFASGELKHGTIALIEDGTPVLTLITQESINWNIRGNVNEVLARGAKTCVFAMENVAQPGDRFVIPQV HPLLTPLASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE
Sequences:
>Translated_601_residues MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDIVTVVKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPN HENAHPHQSKSGRFTIVHNGVIENYSLLKEEYLQNHSFISDTDTEVIVQLIELFAEELSTKEAFKKALSLLHGSYAICLI DQTDTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDQFVEIMDKEIVIVTKDGFTLETLEGEEVIRASYTAELDAS DIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEVGEINVNQTIIDEILSSDRIHIVACGTSYHAGLVGKNLIEKMAKIPVE VHVSSEFGYNLPLMSKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPEIAVASTKA YTAQISVLAVLAVSLGRELGDAEALNINLAAELGIVATAMEAMVSSKEVIEHIAGEYLATSRNAFFLGRNIDYFVAMEAA LKLKEISYIQAEGFASGELKHGTIALIEDGTPVLTLITQESINWNIRGNVNEVLARGAKTCVFAMENVAQPGDRFVIPQV HPLLTPLASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE >Mature_601_residues MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDIVTVVKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPN HENAHPHQSKSGRFTIVHNGVIENYSLLKEEYLQNHSFISDTDTEVIVQLIELFAEELSTKEAFKKALSLLHGSYAICLI DQTDTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDQFVEIMDKEIVIVTKDGFTLETLEGEEVIRASYTAELDAS DIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEVGEINVNQTIIDEILSSDRIHIVACGTSYHAGLVGKNLIEKMAKIPVE VHVSSEFGYNLPLMSKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPEIAVASTKA YTAQISVLAVLAVSLGRELGDAEALNINLAAELGIVATAMEAMVSSKEVIEHIAGEYLATSRNAFFLGRNIDYFVAMEAA LKLKEISYIQAEGFASGELKHGTIALIEDGTPVLTLITQESINWNIRGNVNEVLARGAKTCVFAMENVAQPGDRFVIPQV HPLLTPLASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI205277386, Length=685, Percent_Identity=31.8248175182482, Blast_Score=311, Evalue=1e-84, Organism=Homo sapiens, GI4826742, Length=692, Percent_Identity=30.635838150289, Blast_Score=308, Evalue=1e-83, Organism=Escherichia coli, GI1790167, Length=615, Percent_Identity=41.6260162601626, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI87082251, Length=336, Percent_Identity=21.7261904761905, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17539970, Length=430, Percent_Identity=31.3953488372093, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17532897, Length=431, Percent_Identity=31.0904872389791, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17532899, Length=431, Percent_Identity=31.0904872389791, Blast_Score=205, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6322745, Length=433, Percent_Identity=32.5635103926097, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6323731, Length=380, Percent_Identity=26.8421052631579, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6323730, Length=204, Percent_Identity=37.2549019607843, Blast_Score=103, Evalue=6e-23, Organism=Drosophila melanogaster, GI21357745, Length=688, Percent_Identity=30.8139534883721, Blast_Score=312, Evalue=4e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 65753; Mature: 65753
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDIVTVVKEKGRIADLASLVPS CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCHHHHHHHCCC DAFGTTGIGHTRWATHGKPNHENAHPHQSKSGRFTIVHNGVIENYSLLKEEYLQNHSFIS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC DTDTEVIVQLIELFAEELSTKEAFKKALSLLHGSYAICLIDQTDTETLYAAKNKSPLLIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCEEEE KGENFNVIASDAMAVLKETDQFVEIMDKEIVIVTKDGFTLETLEGEEVIRASYTAELDAS CCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCHHHHHHEECCCCHH DIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEVGEINVNQTIIDEILSSDRIHIVACGTS HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEEEECCC YHAGLVGKNLIEKMAKIPVEVHVSSEFGYNLPLMSKKPLFIFITQSGETADSRQCLVKVK CCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH ELGYRTLTLTNVPGSTLDREADHSMYLYAGPEIAVASTKAYTAQISVLAVLAVSLGRELG HCCCEEEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCC DAEALNINLAAELGIVATAMEAMVSSKEVIEHIAGEYLATSRNAFFLGRNIDYFVAMEAA CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHH LKLKEISYIQAEGFASGELKHGTIALIEDGTPVLTLITQESINWNIRGNVNEVLARGAKT HHHHHHHEEEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCHHHHHHCCCHH CVFAMENVAQPGDRFVIPQVHPLLTPLASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTV HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC E C >Mature Secondary Structure MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDIVTVVKEKGRIADLASLVPS CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCHHHHHHHCCC DAFGTTGIGHTRWATHGKPNHENAHPHQSKSGRFTIVHNGVIENYSLLKEEYLQNHSFIS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC DTDTEVIVQLIELFAEELSTKEAFKKALSLLHGSYAICLIDQTDTETLYAAKNKSPLLIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCEEEE KGENFNVIASDAMAVLKETDQFVEIMDKEIVIVTKDGFTLETLEGEEVIRASYTAELDAS CCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCHHHHHHEECCCCHH DIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEVGEINVNQTIIDEILSSDRIHIVACGTS HCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEEEECCC YHAGLVGKNLIEKMAKIPVEVHVSSEFGYNLPLMSKKPLFIFITQSGETADSRQCLVKVK CCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH ELGYRTLTLTNVPGSTLDREADHSMYLYAGPEIAVASTKAYTAQISVLAVLAVSLGRELG HCCCEEEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCC DAEALNINLAAELGIVATAMEAMVSSKEVIEHIAGEYLATSRNAFFLGRNIDYFVAMEAA CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHH LKLKEISYIQAEGFASGELKHGTIALIEDGTPVLTLITQESINWNIRGNVNEVLARGAKT HHHHHHHEEEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCHHHHHHCCCHH CVFAMENVAQPGDRFVIPQVHPLLTPLASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTV HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]