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The map label for this gene is fliF [H]

Identifier: 116872102

GI number: 116872102

Start: 707969

End: 709621

Strand: Direct

Name: fliF [H]

Synonym: lwe0682

Alternate gene names: 116872102

Gene position: 707969-709621 (Clockwise)

Preceding gene: 116872101

Following gene: 116872103

Centisome position: 25.16

GC content: 38.23

Gene sequence:

>1653_bases
ATGGCAAAAATAAAAACAATGTATTCGAAATTGAAGAATTGGCACAAAGGCGCGATTTTTGTCGGCCTTTTTGTCGTAGT
CACGGTGTTATTACTCTACATGAACACGCCCAAAACAGAAGTTACGCTTTATAAAAACTTATCCGAAACAAGCCAACAAC
AAGTCACTGATCAATTAGCTAAAATGGGCGTTGATTATACAGTTGATAAAAGCGGAAATATTTTAGTAGACGAAAAAGTG
GAGACGCTTGTTCGTGATAAGTTCGCTGATTTAGGAATCCCGTACACTGGTCAAGATGGGAATGATATTTTATTAAATAG
CTCGCTAGGAGCAAGTGAAGAAGACAAAAAAATGCAAGAAAAAGTCGGAACAAAAGTCAATTTAGAAAAAGAAATCGTTC
AAAGCTATGGCATAACCGTTGACAGCGCATCCGTTCAGCTAACTTTACCAGAATCAAGTTCGATTTTTGAAGAAGCAAGT
CAAAAAGGAACGGCCGCTGTGACGCTAAAAACTAAAAATAACCAAACATTAACCAAAGAGCAAGTACTTGGTATTCAACG
AACTGTCAGCGCAGCCGTACCAAATGTTGCTAGTGAAGATGTAGCGATTATTGATACGAAAAATGGCGTTATTTCCGAAG
CGGATACCGCAAATGAAGAAGGCAGTTCCGCATATAAAAATGAAGTTGATATTCAAAATGCCATTGGAAAAAATGTGAAA
ACCGATATTGAAGGTACACTTTCAAGCATTTTTGCCTTAGATAACTTCCGAGTAAACACAAATGTTGCCGTTAACTTTGA
TGAAATAAAACAAAATACGGAACGTTACCCAAATGATGGAAAAGTCCGTAGCAACCAAAAAGATACTTCCACAGACACAT
CGAAAGGATCTACCAACACAACAGAATCTGGAACTGCGTCGAACGCTGACGTACCAAACTATACAGAAGAAAATGGTGGA
GATCAAAATACCTATACAAGTGAAAAATCTAGTGAAACAACTAATTATGAATTAGACTCCACTATCCAAGAAATCGAAAA
ACACCCATCCCTCGCAAAAACAAATGTCGTTGTATGGGTTGATCAGCAAACACTAAATAAAAATGGTGTAGACATGGCCG
AATTTACAAAAGCAATTGGTGTTTCGGCAGGACTAACACCTAATATGACAACGGAAGAAGCTGGTGCTGGCGGAGAAGCG
ACTGCTACACCAACTTTTGAAGGGACGTTCCAAAATGGTGATGTTACAATTATGCCAATTCAATTCTTAGATAACCAAAC
ACCTGTAGAAAAAGATCCAGCTAAAACAACTGAACCAGCAAGCAAAGCATGGATTTGGTGGCTAGTAGGCAGTCTACTAT
TTGCAATTATTGCAGCGGGAATTATCGCTTATATTATTTTCCTTAAGCGAAAAGAACAATTAGAAGAAGCTTTAGAAGCA
GAAGAAAAAGATTTTATTCCAGCTGAAGAGGCAATAATTGACCCAGAAGAACACCCAGATTTCCATTTCCAAACAAATGC
ATTTGATTTATCAGAACCAGAATTAAAAGCTCGCAAAGAAAGTTTGAAAAATAAACTCGGTGAAATGGCCAAAGAAGACC
CAGGTCGCGCCGCAGCAGTCATCCAAAAATGGCTCAATGAAAGGCAGGAATAA

Upstream 100 bases:

>100_bases
GCTACAAACAGCTTTTAAATATGCAAGTGTAACGATTTAGACTAGTCGGGGGAGTTTTAGTCAATCGTCCACACGAGAAA
AATGGAGCGAAGTTTTTAAG

Downstream 100 bases:

>100_bases
ACATGGCAGAAACACTCAAAGAAACCTTAGAAGAAACAAATGCTGAATTAGAAACAGTCGAAGTAGAAGCGACAGAAGAA
AAAGCAACTACTTCAGCAGA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MAKIKTMYSKLKNWHKGAIFVGLFVVVTVLLLYMNTPKTEVTLYKNLSETSQQQVTDQLAKMGVDYTVDKSGNILVDEKV
ETLVRDKFADLGIPYTGQDGNDILLNSSLGASEEDKKMQEKVGTKVNLEKEIVQSYGITVDSASVQLTLPESSSIFEEAS
QKGTAAVTLKTKNNQTLTKEQVLGIQRTVSAAVPNVASEDVAIIDTKNGVISEADTANEEGSSAYKNEVDIQNAIGKNVK
TDIEGTLSSIFALDNFRVNTNVAVNFDEIKQNTERYPNDGKVRSNQKDTSTDTSKGSTNTTESGTASNADVPNYTEENGG
DQNTYTSEKSSETTNYELDSTIQEIEKHPSLAKTNVVVWVDQQTLNKNGVDMAEFTKAIGVSAGLTPNMTTEEAGAGGEA
TATPTFEGTFQNGDVTIMPIQFLDNQTPVEKDPAKTTEPASKAWIWWLVGSLLFAIIAAGIIAYIIFLKRKEQLEEALEA
EEKDFIPAEEAIIDPEEHPDFHFQTNAFDLSEPELKARKESLKNKLGEMAKEDPGRAAAVIQKWLNERQE

Sequences:

>Translated_550_residues
MAKIKTMYSKLKNWHKGAIFVGLFVVVTVLLLYMNTPKTEVTLYKNLSETSQQQVTDQLAKMGVDYTVDKSGNILVDEKV
ETLVRDKFADLGIPYTGQDGNDILLNSSLGASEEDKKMQEKVGTKVNLEKEIVQSYGITVDSASVQLTLPESSSIFEEAS
QKGTAAVTLKTKNNQTLTKEQVLGIQRTVSAAVPNVASEDVAIIDTKNGVISEADTANEEGSSAYKNEVDIQNAIGKNVK
TDIEGTLSSIFALDNFRVNTNVAVNFDEIKQNTERYPNDGKVRSNQKDTSTDTSKGSTNTTESGTASNADVPNYTEENGG
DQNTYTSEKSSETTNYELDSTIQEIEKHPSLAKTNVVVWVDQQTLNKNGVDMAEFTKAIGVSAGLTPNMTTEEAGAGGEA
TATPTFEGTFQNGDVTIMPIQFLDNQTPVEKDPAKTTEPASKAWIWWLVGSLLFAIIAAGIIAYIIFLKRKEQLEEALEA
EEKDFIPAEEAIIDPEEHPDFHFQTNAFDLSEPELKARKESLKNKLGEMAKEDPGRAAAVIQKWLNERQE
>Mature_549_residues
AKIKTMYSKLKNWHKGAIFVGLFVVVTVLLLYMNTPKTEVTLYKNLSETSQQQVTDQLAKMGVDYTVDKSGNILVDEKVE
TLVRDKFADLGIPYTGQDGNDILLNSSLGASEEDKKMQEKVGTKVNLEKEIVQSYGITVDSASVQLTLPESSSIFEEASQ
KGTAAVTLKTKNNQTLTKEQVLGIQRTVSAAVPNVASEDVAIIDTKNGVISEADTANEEGSSAYKNEVDIQNAIGKNVKT
DIEGTLSSIFALDNFRVNTNVAVNFDEIKQNTERYPNDGKVRSNQKDTSTDTSKGSTNTTESGTASNADVPNYTEENGGD
QNTYTSEKSSETTNYELDSTIQEIEKHPSLAKTNVVVWVDQQTLNKNGVDMAEFTKAIGVSAGLTPNMTTEEAGAGGEAT
ATPTFEGTFQNGDVTIMPIQFLDNQTPVEKDPAKTTEPASKAWIWWLVGSLLFAIIAAGIIAYIIFLKRKEQLEEALEAE
EKDFIPAEEAIIDPEEHPDFHFQTNAFDLSEPELKARKESLKNKLGEMAKEDPGRAAAVIQKWLNERQE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=366, Percent_Identity=26.2295081967213, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 60273; Mature: 60141

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKTMYSKLKNWHKGAIFVGLFVVVTVLLLYMNTPKTEVTLYKNLSETSQQQVTDQLA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
KMGVDYTVDKSGNILVDEKVETLVRDKFADLGIPYTGQDGNDILLNSSLGASEEDKKMQE
HCCCCEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
KVGTKVNLEKEIVQSYGITVDSASVQLTLPESSSIFEEASQKGTAAVTLKTKNNQTLTKE
HCCCCCCHHHHHHHHHCCEEECCEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCHH
QVLGIQRTVSAAVPNVASEDVAIIDTKNGVISEADTANEEGSSAYKNEVDIQNAIGKNVK
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCC
TDIEGTLSSIFALDNFRVNTNVAVNFDEIKQNTERYPNDGKVRSNQKDTSTDTSKGSTNT
CHHHHHHHHHHHHCCEEECCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
TESGTASNADVPNYTEENGGDQNTYTSEKSSETTNYELDSTIQEIEKHPSLAKTNVVVWV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
DQQTLNKNGVDMAEFTKAIGVSAGLTPNMTTEEAGAGGEATATPTFEGTFQNGDVTIMPI
EHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEE
QFLDNQTPVEKDPAKTTEPASKAWIWWLVGSLLFAIIAAGIIAYIIFLKRKEQLEEALEA
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKDFIPAEEAIIDPEEHPDFHFQTNAFDLSEPELKARKESLKNKLGEMAKEDPGRAAAV
HHHCCCCHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IQKWLNERQE
HHHHHHHCCC
>Mature Secondary Structure 
AKIKTMYSKLKNWHKGAIFVGLFVVVTVLLLYMNTPKTEVTLYKNLSETSQQQVTDQLA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
KMGVDYTVDKSGNILVDEKVETLVRDKFADLGIPYTGQDGNDILLNSSLGASEEDKKMQE
HCCCCEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
KVGTKVNLEKEIVQSYGITVDSASVQLTLPESSSIFEEASQKGTAAVTLKTKNNQTLTKE
HCCCCCCHHHHHHHHHCCEEECCEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCHH
QVLGIQRTVSAAVPNVASEDVAIIDTKNGVISEADTANEEGSSAYKNEVDIQNAIGKNVK
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCC
TDIEGTLSSIFALDNFRVNTNVAVNFDEIKQNTERYPNDGKVRSNQKDTSTDTSKGSTNT
CHHHHHHHHHHHHCCEEECCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
TESGTASNADVPNYTEENGGDQNTYTSEKSSETTNYELDSTIQEIEKHPSLAKTNVVVWV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
DQQTLNKNGVDMAEFTKAIGVSAGLTPNMTTEEAGAGGEATATPTFEGTFQNGDVTIMPI
EHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEE
QFLDNQTPVEKDPAKTTEPASKAWIWWLVGSLLFAIIAAGIIAYIIFLKRKEQLEEALEA
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKDFIPAEEAIIDPEEHPDFHFQTNAFDLSEPELKARKESLKNKLGEMAKEDPGRAAAV
HHHCCCCHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IQKWLNERQE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8002583; 11259647 [H]