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The map label for this gene is flgC [H]

Identifier: 116872100

GI number: 116872100

Start: 707177

End: 707587

Strand: Direct

Name: flgC [H]

Synonym: lwe0680

Alternate gene names: 116872100

Gene position: 707177-707587 (Clockwise)

Preceding gene: 116872099

Following gene: 116872101

Centisome position: 25.13

GC content: 39.9

Gene sequence:

>411_bases
ATGTTTGAAGGAATTAACACAAGTGGCTCTGCGTTAAACGCTGCGAAACAGTGGATGGAAGTGAGCTCTAATAATATTGC
TAATGCAGACTCAAGCGCCGCACCTGGAGAAACTCCTTTCCTTAGAAAACGCGTCGTATTATCTGAAATTACACCCTTTG
AAACAGCATTAACTGGAACAAAAGGCGTTAAAGTAAGTGAAATATCAGCTGATACAGGAAGCGTCAAACGTGTATATGAT
CCAACCCATCCAAATGCAAATGAAGCAGGTTACGTCAACTATGCAAATGTGGACATGACAGCCGAAATGACCAATTTGAT
GGTTGGACAAAAAATGTACGCTGCCAATACTTCGGCCTTACAAGCAAATGAAAAAATGATGGAAAAAGATTTAGAGATAG
GCAAAGTATAA

Upstream 100 bases:

>100_bases
GCCTAACCAAAAATAATCAAATGTACGCGCTCGCTATCAGTGCACTCAACTATAATTCATCTATCAACACAGCAGCTCGT
GGAAAGTAAGGTGAAAAATT

Downstream 100 bases:

>100_bases
AGGAGTGTTTTAAAGAATGGCAATTGAAAGTATTAGTACTGCAAACGTGTTGCCCAAAATTACGCTTGGTGAAACCGCGA
AACCAGAAAGTGCGACAGGT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISADTGSVKRVYD
PTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV

Sequences:

>Translated_136_residues
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISADTGSVKRVYD
PTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV
>Mature_136_residues
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISADTGSVKRVYD
PTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=131, Percent_Identity=38.1679389312977, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14583; Mature: 14583

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
KGVKVSEISADTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSAL
CCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCHHH
QANEKMMEKDLEIGKV
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
KGVKVSEISADTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSAL
CCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCHHH
QANEKMMEKDLEIGKV
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]