| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872092
Identifier: 116872092
GI number: 116872092
Start: 701455
End: 701919
Strand: Direct
Name: 116872092
Synonym: lwe0672
Alternate gene names: NA
Gene position: 701455-701919 (Clockwise)
Preceding gene: 116872091
Following gene: 116872093
Centisome position: 24.93
GC content: 32.9
Gene sequence:
>465_bases ATGAATAATGTTTCAATGAGCCAAATTTCGCAGTCCAAACAGACGAACTTAGTTAGGGGAATGCAAGAAATAAATCAAAC ACAACAGCTTTATTTTGAACAAATGAAGGCGAATGGCAAGAAACTAACTCCTTCCCTGACTGAAATTAACGAACTCATAA CGAACGTAACAGATAAAAAAACACTTGTTGAAATGGATATGACTGTCGATAATGTCTTGAGTTACAAAAAAGCAGTCCAA ACATTTTTGAATTTTTATGTAAATAATGTGATGGATTATGACAATATCGAAAGCAGACATCCAAAATACGGTTTTTCGCA AAAAATGACTATTTTAAAACAAGTAGAACAACAAACCAACGAACTAGATGATGTAATGAATTTAATTGATACAAAAACTG GACATTTAGACATGTTGAATCGTATAGGTGAGATTACGGGCATGATTCTGGATGTCGTATTGTAG
Upstream 100 bases:
>100_bases TATTTTTTGAAAAAATATATACTTTTTCAGGTTGTTTCAGTATAATTAAATAGAAAAATAAGGTTTAGAAAGCGAAAATG AGTTTTTCGGGGGAAAAAGG
Downstream 100 bases:
>100_bases GTGATGGGAATGCAAAACGAATTAATCAATCAATTAGAAATTTTAATCGAAAAAAATGTAAAAGCGACAGATGAATCGAA AATTTTAGGCAAACTATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNNVSMSQISQSKQTNLVRGMQEINQTQQLYFEQMKANGKKLTPSLTEINELITNVTDKKTLVEMDMTVDNVLSYKKAVQ TFLNFYVNNVMDYDNIESRHPKYGFSQKMTILKQVEQQTNELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL
Sequences:
>Translated_154_residues MNNVSMSQISQSKQTNLVRGMQEINQTQQLYFEQMKANGKKLTPSLTEINELITNVTDKKTLVEMDMTVDNVLSYKKAVQ TFLNFYVNNVMDYDNIESRHPKYGFSQKMTILKQVEQQTNELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL >Mature_154_residues MNNVSMSQISQSKQTNLVRGMQEINQTQQLYFEQMKANGKKLTPSLTEINELITNVTDKKTLVEMDMTVDNVLSYKKAVQ TFLNFYVNNVMDYDNIESRHPKYGFSQKMTILKQVEQQTNELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17746; Mature: 17746
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVSMSQISQSKQTNLVRGMQEINQTQQLYFEQMKANGKKLTPSLTEINELITNVTDKK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH TLVEMDMTVDNVLSYKKAVQTFLNFYVNNVMDYDNIESRHPKYGFSQKMTILKQVEQQTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNNVSMSQISQSKQTNLVRGMQEINQTQQLYFEQMKANGKKLTPSLTEINELITNVTDKK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH TLVEMDMTVDNVLSYKKAVQTFLNFYVNNVMDYDNIESRHPKYGFSQKMTILKQVEQQTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA