Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872077

Identifier: 116872077

GI number: 116872077

Start: 686018

End: 687931

Strand: Direct

Name: 116872077

Synonym: lwe0657

Alternate gene names: NA

Gene position: 686018-687931 (Clockwise)

Preceding gene: 116872076

Following gene: 116872078

Centisome position: 24.38

GC content: 35.32

Gene sequence:

>1914_bases
ATGCGGCCGTTAATTTCGATTTGTATGATAGTCAAAAATGAAGCACATATTTTAAGACAAAGTTTAGCGTCTTTTAGAAA
ATTTACAGAAGAAATCATTATTGTAGATACAGGTTCCACTGACGAAACCAAGGAAATAGCAAAAGAATTCACTGATTTTG
TCTATGATTTTGAATGGACAGGCAACTTTTCTGATGCAAGAAACTTTGCGGCTAAACATGCAACGGGAAAATGGATTTTA
GCCATTGATGCAGATGAATGTTTGGAAGAAGAAAGTTACCTTCAATTAAAAAAACAATTGAAAGCCCCTACAGAGCCTAT
TCAGATGGCACAAATTATAAGTTTTACAGGAGAAAAAGGACGAGTAACAACGACGAACCAAATGGCGCGTGTCTATAAGA
ATGATGGAACTATTTGTTTCCGCGGAGTGATCCATGAACAACTGGAAGGAATAGACAAACATGCAGTTGAAACGGGATTT
GCACCTGTGAAAATTTACCATTATGGTTATATGTCGGAAATTGTAGAAAAACAAGGAAAGTCAGACCGCAATTTACGTTT
ATTAGAAAAAGAAGTAAAAAATAATAAAAATAGTGGATTTGTGCACTTTAATATTGGTCAAGAAATGAATCGTCTTGGTG
ATAAAAAAGAAGCATTGAAAGAATTCACTAAAGCATTTCGGTTGCGTGATAATAATCAGTATATTTGGGCTAAATTGAGT
GCCTACCATATTTCCGAACTACTTGAACAAGAAAAACGATATGAGGAAAGTTTGGCAATTATTGAAGAAGCAAAAGTCAT
TTGGCCAAATGTGCCAGAATTCCCACTTAAAAAGGCAAACATTTTATATTTACATCATCAATTAGAAGATGCTAAAGAAA
TTTATCATAGTTTACTTGATAATAAAGTAATCGATTATCAACCCATTGTTTTGTATGAAGCAACAAACTTTATGCCACAT
AAAATGCTTGGAACAATTTATCTAGAGGAAAAAGATTATACTCGAGCAATGACTCATTTTTCCAAAGCTTATGCTGAAAA
TAGTTCTGACTATGGTGTCATGTTCCAAATGATTATGCTACTGAGCAAATTCCATCAACCGAAAGAGATTTTTGCATTTA
TGGAACGCCATAACTTTATTTCTAGTACGGAAACGGGTTTACGTTTACTTTCGATGACAACGCAACAAGGTTATGCTGAA
CTTTCCGAACTCATCGTTCAGTCGCTAACCGATGTGTATCCTCCAGTCGCAGAAGCAACAGAAGTGAAAATCGCTACAAT
TCGTAATGTATTCCCAGTAATTAGCGAATCAGCTATTGTTTTTGGAATCAAAGAGGAATTAATTGATGCGGCCGACTTAT
GTTTATGGCATTACGAAAACCCGCAATTACCAATCGAACGCGTCATGAAAAATAGTGATGTTGGCGATATTTATAATTTT
ATCTTTGAAAATGGTCCAAGAATTAGCAAAAAACGCTATTTGTTCGTATTAGAACGGGCAATTGCACTCGGAAAAGGCGA
GTATGCTGATTACTTATTAGCGCTTCGAAATGTTTATCATGATAGCATTAACAGCCATATTGCTGACCTGTTTTTCCAAT
ATGATTTTGCGGATATAGCGCTTGATTTTTATAATATCGTGGATGCAGACGAAGTGACAAAAGAAGGCTATATCAACCTA
ATCAACTACTTAATGGATGCTGATGTAATGGATGAAGCACTTTCAATTGCGGAGCGTGGCATAGATAATTTTAGTACGGA
TTTCCGTTTTTACCTTTGGACAATCAAAATTGATACTGAAAACCGCGCCAATCGTATTAGCGAAGCAATGGATGAATTTC
CAAATAATCGTTATTTAGCAAAACTGTTAGATGAAGTGAGTGTGTTTCAAGATACTGCTACCAACAATCGATAG

Upstream 100 bases:

>100_bases
ATGATTTATGATTTGCCAAAAGCGAAGAAACATCTATTACATCGAACCAGTAGCGATAAAATAAAATTAGTGAATTAATT
GATAGAAAGAGGGAAGATTC

Downstream 100 bases:

>100_bases
GAGGCCAGTAATATGACAGAAGAAAAAGGAATTTTACTACAAAGTGGGACAAATGAATTAGAAATCGTTACATTTACAGT
TGGCGAAAACTTATTTTGCA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWTGNFSDARNFAAKHATGKWIL
AIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGF
APVKIYHYGYMSEIVEKQGKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS
AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLDNKVIDYQPIVLYEATNFMPH
KMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAE
LSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF
IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKEGYINL
INYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR

Sequences:

>Translated_637_residues
MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWTGNFSDARNFAAKHATGKWIL
AIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGF
APVKIYHYGYMSEIVEKQGKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS
AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLDNKVIDYQPIVLYEATNFMPH
KMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAE
LSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF
IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKEGYINL
INYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR
>Mature_637_residues
MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWTGNFSDARNFAAKHATGKWIL
AIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGF
APVKIYHYGYMSEIVEKQGKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS
AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLDNKVIDYQPIVLYEATNFMPH
KMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAE
LSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF
IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKEGYINL
INYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 73806; Mature: 73806

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWT
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEC
GNFSDARNFAAKHATGKWILAIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKG
CCHHHHHHHHHHCCCCCEEEEECHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
RVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGFAPVKIYHYGYMSEIVEKQGK
CEECHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC
SDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS
CCCCHHHHHHHHCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEHH
AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLD
HHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC
NKVIDYQPIVLYEATNFMPHKMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIML
CCCCCCCCEEEEECCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAELSELIVQSLTDVYPPVAEAT
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF
CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEEECCCCCCCHHHHHCCCCHHHHHHH
IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIA
HHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LDFYNIVDADEVTKEGYINLINYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECC
NRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWT
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEC
GNFSDARNFAAKHATGKWILAIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKG
CCHHHHHHHHHHCCCCCEEEEECHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
RVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGFAPVKIYHYGYMSEIVEKQGK
CEECHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC
SDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS
CCCCHHHHHHHHCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEHH
AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLD
HHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC
NKVIDYQPIVLYEATNFMPHKMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIML
CCCCCCCCEEEEECCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAELSELIVQSLTDVYPPVAEAT
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF
CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEEECCCCCCCHHHHHCCCCHHHHHHH
IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIA
HHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LDFYNIVDADEVTKEGYINLINYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECC
NRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8123787 [H]