| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872077
Identifier: 116872077
GI number: 116872077
Start: 686018
End: 687931
Strand: Direct
Name: 116872077
Synonym: lwe0657
Alternate gene names: NA
Gene position: 686018-687931 (Clockwise)
Preceding gene: 116872076
Following gene: 116872078
Centisome position: 24.38
GC content: 35.32
Gene sequence:
>1914_bases ATGCGGCCGTTAATTTCGATTTGTATGATAGTCAAAAATGAAGCACATATTTTAAGACAAAGTTTAGCGTCTTTTAGAAA ATTTACAGAAGAAATCATTATTGTAGATACAGGTTCCACTGACGAAACCAAGGAAATAGCAAAAGAATTCACTGATTTTG TCTATGATTTTGAATGGACAGGCAACTTTTCTGATGCAAGAAACTTTGCGGCTAAACATGCAACGGGAAAATGGATTTTA GCCATTGATGCAGATGAATGTTTGGAAGAAGAAAGTTACCTTCAATTAAAAAAACAATTGAAAGCCCCTACAGAGCCTAT TCAGATGGCACAAATTATAAGTTTTACAGGAGAAAAAGGACGAGTAACAACGACGAACCAAATGGCGCGTGTCTATAAGA ATGATGGAACTATTTGTTTCCGCGGAGTGATCCATGAACAACTGGAAGGAATAGACAAACATGCAGTTGAAACGGGATTT GCACCTGTGAAAATTTACCATTATGGTTATATGTCGGAAATTGTAGAAAAACAAGGAAAGTCAGACCGCAATTTACGTTT ATTAGAAAAAGAAGTAAAAAATAATAAAAATAGTGGATTTGTGCACTTTAATATTGGTCAAGAAATGAATCGTCTTGGTG ATAAAAAAGAAGCATTGAAAGAATTCACTAAAGCATTTCGGTTGCGTGATAATAATCAGTATATTTGGGCTAAATTGAGT GCCTACCATATTTCCGAACTACTTGAACAAGAAAAACGATATGAGGAAAGTTTGGCAATTATTGAAGAAGCAAAAGTCAT TTGGCCAAATGTGCCAGAATTCCCACTTAAAAAGGCAAACATTTTATATTTACATCATCAATTAGAAGATGCTAAAGAAA TTTATCATAGTTTACTTGATAATAAAGTAATCGATTATCAACCCATTGTTTTGTATGAAGCAACAAACTTTATGCCACAT AAAATGCTTGGAACAATTTATCTAGAGGAAAAAGATTATACTCGAGCAATGACTCATTTTTCCAAAGCTTATGCTGAAAA TAGTTCTGACTATGGTGTCATGTTCCAAATGATTATGCTACTGAGCAAATTCCATCAACCGAAAGAGATTTTTGCATTTA TGGAACGCCATAACTTTATTTCTAGTACGGAAACGGGTTTACGTTTACTTTCGATGACAACGCAACAAGGTTATGCTGAA CTTTCCGAACTCATCGTTCAGTCGCTAACCGATGTGTATCCTCCAGTCGCAGAAGCAACAGAAGTGAAAATCGCTACAAT TCGTAATGTATTCCCAGTAATTAGCGAATCAGCTATTGTTTTTGGAATCAAAGAGGAATTAATTGATGCGGCCGACTTAT GTTTATGGCATTACGAAAACCCGCAATTACCAATCGAACGCGTCATGAAAAATAGTGATGTTGGCGATATTTATAATTTT ATCTTTGAAAATGGTCCAAGAATTAGCAAAAAACGCTATTTGTTCGTATTAGAACGGGCAATTGCACTCGGAAAAGGCGA GTATGCTGATTACTTATTAGCGCTTCGAAATGTTTATCATGATAGCATTAACAGCCATATTGCTGACCTGTTTTTCCAAT ATGATTTTGCGGATATAGCGCTTGATTTTTATAATATCGTGGATGCAGACGAAGTGACAAAAGAAGGCTATATCAACCTA ATCAACTACTTAATGGATGCTGATGTAATGGATGAAGCACTTTCAATTGCGGAGCGTGGCATAGATAATTTTAGTACGGA TTTCCGTTTTTACCTTTGGACAATCAAAATTGATACTGAAAACCGCGCCAATCGTATTAGCGAAGCAATGGATGAATTTC CAAATAATCGTTATTTAGCAAAACTGTTAGATGAAGTGAGTGTGTTTCAAGATACTGCTACCAACAATCGATAG
Upstream 100 bases:
>100_bases ATGATTTATGATTTGCCAAAAGCGAAGAAACATCTATTACATCGAACCAGTAGCGATAAAATAAAATTAGTGAATTAATT GATAGAAAGAGGGAAGATTC
Downstream 100 bases:
>100_bases GAGGCCAGTAATATGACAGAAGAAAAAGGAATTTTACTACAAAGTGGGACAAATGAATTAGAAATCGTTACATTTACAGT TGGCGAAAACTTATTTTGCA
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWTGNFSDARNFAAKHATGKWIL AIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGF APVKIYHYGYMSEIVEKQGKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLDNKVIDYQPIVLYEATNFMPH KMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAE LSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKEGYINL INYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR
Sequences:
>Translated_637_residues MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWTGNFSDARNFAAKHATGKWIL AIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGF APVKIYHYGYMSEIVEKQGKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLDNKVIDYQPIVLYEATNFMPH KMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAE LSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKEGYINL INYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR >Mature_637_residues MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWTGNFSDARNFAAKHATGKWIL AIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGF APVKIYHYGYMSEIVEKQGKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLDNKVIDYQPIVLYEATNFMPH KMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAE LSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKEGYINL INYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 73806; Mature: 73806
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWT CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEC GNFSDARNFAAKHATGKWILAIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKG CCHHHHHHHHHHCCCCCEEEEECHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC RVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGFAPVKIYHYGYMSEIVEKQGK CEECHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC SDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS CCCCHHHHHHHHCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEHH AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLD HHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC NKVIDYQPIVLYEATNFMPHKMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIML CCCCCCCCEEEEECCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAELSELIVQSLTDVYPPVAEAT HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEEECCCCCCCHHHHHCCCCHHHHHHH IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIA HHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LDFYNIVDADEVTKEGYINLINYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECC NRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETKEIAKEFTDFVYDFEWT CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEC GNFSDARNFAAKHATGKWILAIDADECLEEESYLQLKKQLKAPTEPIQMAQIISFTGEKG CCHHHHHHHHHHCCCCCEEEEECHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC RVTTTNQMARVYKNDGTICFRGVIHEQLEGIDKHAVETGFAPVKIYHYGYMSEIVEKQGK CEECHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC SDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGDKKEALKEFTKAFRLRDNNQYIWAKLS CCCCHHHHHHHHCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEHH AYHISELLEQEKRYEESLAIIEEAKVIWPNVPEFPLKKANILYLHHQLEDAKEIYHSLLD HHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC NKVIDYQPIVLYEATNFMPHKMLGTIYLEEKDYTRAMTHFSKAYAENSSDYGVMFQMIML CCCCCCCCEEEEECCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LSKFHQPKEIFAFMERHNFISSTETGLRLLSMTTQQGYAELSELIVQSLTDVYPPVAEAT HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EVKIATIRNVFPVISESAIVFGIKEELIDAADLCLWHYENPQLPIERVMKNSDVGDIYNF CCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEEECCCCCCCHHHHHCCCCHHHHHHH IFENGPRISKKRYLFVLERAIALGKGEYADYLLALRNVYHDSINSHIADLFFQYDFADIA HHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LDFYNIVDADEVTKEGYINLINYLMDADVMDEALSIAERGIDNFSTDFRFYLWTIKIDTE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECC NRANRISEAMDEFPNNRYLAKLLDEVSVFQDTATNNR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8123787 [H]