| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yhaI [H]
Identifier: 116872061
GI number: 116872061
Start: 673330
End: 673752
Strand: Direct
Name: yhaI [H]
Synonym: lwe0641
Alternate gene names: 116872061
Gene position: 673330-673752 (Clockwise)
Preceding gene: 116872060
Following gene: 116872064
Centisome position: 23.93
GC content: 34.75
Gene sequence:
>423_bases ATGGGGTTTTTAGAAGCTTATAAATCATTTTGGAAGAATTACTTTAACTTTGAAGGTCGTGCATCCCGGTCGGCTTACTG GTATGTAGTGCTCTGGAATGGAATGATTTTTGCAGTACTTTACTTTTTATCTTTTATATTGGGTATATCTGGATTTTTTG GAAGTTTGCTTGGAGGAACTGGTCTTGCGAGTAATATTGCGGCGGTAATTGTGCTTGTCTTATTATTTCTTTACATGTTA GCAGTTATAGTGCCAACAATTAGTTTAATGGTTCGACGTTTGCATGACTCTGGCAAAAGTGGTTTTTTCTTTTTCCTAGA TTTTATTCCATTTGTTGGTGGCCTTATTATGTTGATATTTATGTGCCTTGAAAGTGATGGATCAAATCAATACGGAGATA GCTATAGTCAATTTGATATTTAA
Upstream 100 bases:
>100_bases AATGTGTCTATTTTATGAATCTTTGTCTTATGAGCTTGTATATTGTATTGTCCATGTTTATTCTTAGAGTAATATCAAAT TTAATTACATAGGAGGAAAT
Downstream 100 bases:
>100_bases ATTAAAAAATGAGCTAGGAGAAGTTTTCCTAGCTCATTTTTTTAATGGATTCCTTCGCTCACAAGGAACCAATTAACTTG ATTTGTATTAATAAAATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MGFLEAYKSFWKNYFNFEGRASRSAYWYVVLWNGMIFAVLYFLSFILGISGFFGSLLGGTGLASNIAAVIVLVLLFLYML AVIVPTISLMVRRLHDSGKSGFFFFLDFIPFVGGLIMLIFMCLESDGSNQYGDSYSQFDI
Sequences:
>Translated_140_residues MGFLEAYKSFWKNYFNFEGRASRSAYWYVVLWNGMIFAVLYFLSFILGISGFFGSLLGGTGLASNIAAVIVLVLLFLYML AVIVPTISLMVRRLHDSGKSGFFFFLDFIPFVGGLIMLIFMCLESDGSNQYGDSYSQFDI >Mature_139_residues GFLEAYKSFWKNYFNFEGRASRSAYWYVVLWNGMIFAVLYFLSFILGISGFFGSLLGGTGLASNIAAVIVLVLLFLYMLA VIVPTISLMVRRLHDSGKSGFFFFLDFIPFVGGLIMLIFMCLESDGSNQYGDSYSQFDI
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaH [H]
Homologues:
Organism=Escherichia coli, GI1789491, Length=132, Percent_Identity=35.6060606060606, Blast_Score=86, Evalue=7e-19, Organism=Escherichia coli, GI2367196, Length=124, Percent_Identity=33.8709677419355, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008523 [H]
Pfam domain/function: PF05656 DUF805 [H]
EC number: NA
Molecular weight: Translated: 15784; Mature: 15653
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLEAYKSFWKNYFNFEGRASRSAYWYVVLWNGMIFAVLYFLSFILGISGFFGSLLGGT CCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLASNIAAVIVLVLLFLYMLAVIVPTISLMVRRLHDSGKSGFFFFLDFIPFVGGLIMLIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MCLESDGSNQYGDSYSQFDI HHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GFLEAYKSFWKNYFNFEGRASRSAYWYVVLWNGMIFAVLYFLSFILGISGFFGSLLGGT CHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLASNIAAVIVLVLLFLYMLAVIVPTISLMVRRLHDSGKSGFFFFLDFIPFVGGLIMLIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MCLESDGSNQYGDSYSQFDI HHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]