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The map label for this gene is farR [C]

Identifier: 116872038

GI number: 116872038

Start: 657308

End: 657958

Strand: Direct

Name: farR [C]

Synonym: lwe0618

Alternate gene names: 116872038

Gene position: 657308-657958 (Clockwise)

Preceding gene: 116872037

Following gene: 116872039

Centisome position: 23.36

GC content: 31.8

Gene sequence:

>651_bases
ATTATCACAAATAAGTATAAAACCTTAGATAAAATGGTTTATAATTTACTTCTTGAAAAAATTAAACGAGGAGAATTAGT
ACCAAATCAGCATTTGGCGGAAGAAAAACTAGCAACTGAATTTGGTGTTAGTCGCTCACCGCTCCGAAAAGCTATAGCCA
CACTCACTGCGCAAGGTATTGTAAGCTATCATGAAAATAGTGGGACAGTACTTAATGATGTCCTTATTGATTCGGCTCGT
TATGTACAACTTATGGATACGATTGATATTTTTGTGGATGCTGCTATTATCAGAGCTGCTCATTTTGGATATAATATAGA
TGTAGAAAAACTTCATAATCATCTTCAAGAAATGGAGCGTTTTTCTTATTTAATGGATGTTGAAAATTATTTTAATGAGC
ATCACCGTTATATACTTTGTTTGATAAGTTTTGCAGAAAATCCTTATCAGGTAAGTATCGCTAAACATATTTTCTTTCAA
ATTGTGCATTTTTCTGATGGAATTAATATTTTTAAAGCGGTTGAAATAAGAGAATGGACGAACAAAAAAAGCAGTGAAAT
CTATGAATTCCTTATCCAAAATAAAATCGAACTTGCTCGAAAAACGGTCAAATCTATGTTTGCAGAACTAACGATTCAAG
CATATAGATAA

Upstream 100 bases:

>100_bases
AACCACTCGACAAAGTTGTACCGAAATTATCGGAAAAAGCGAAACGAAGCAAGCTGATTCATTAAAAATAGTATATAATT
ATTAGCGAAGAGGGGTGAGC

Downstream 100 bases:

>100_bases
AAAAGTTGGTGCCATAAAGGTACCAACTTTTTTTGTGTTTTACAATAATACTTATGTTTCCTTAGTTAATTCTTTAATAT
TGGGTGATACGATGGTTGAG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator; GntR Family Transcriptional Regulator

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MITNKYKTLDKMVYNLLLEKIKRGELVPNQHLAEEKLATEFGVSRSPLRKAIATLTAQGIVSYHENSGTVLNDVLIDSAR
YVQLMDTIDIFVDAAIIRAAHFGYNIDVEKLHNHLQEMERFSYLMDVENYFNEHHRYILCLISFAENPYQVSIAKHIFFQ
IVHFSDGINIFKAVEIREWTNKKSSEIYEFLIQNKIELARKTVKSMFAELTIQAYR

Sequences:

>Translated_216_residues
MITNKYKTLDKMVYNLLLEKIKRGELVPNQHLAEEKLATEFGVSRSPLRKAIATLTAQGIVSYHENSGTVLNDVLIDSAR
YVQLMDTIDIFVDAAIIRAAHFGYNIDVEKLHNHLQEMERFSYLMDVENYFNEHHRYILCLISFAENPYQVSIAKHIFFQ
IVHFSDGINIFKAVEIREWTNKKSSEIYEFLIQNKIELARKTVKSMFAELTIQAYR
>Mature_216_residues
MITNKYKTLDKMVYNLLLEKIKRGELVPNQHLAEEKLATEFGVSRSPLRKAIATLTAQGIVSYHENSGTVLNDVLIDSAR
YVQLMDTIDIFVDAAIIRAAHFGYNIDVEKLHNHLQEMERFSYLMDVENYFNEHHRYILCLISFAENPYQVSIAKHIFFQ
IVHFSDGINIFKAVEIREWTNKKSSEIYEFLIQNKIELARKTVKSMFAELTIQAYR

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25210; Mature: 25210

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITNKYKTLDKMVYNLLLEKIKRGELVPNQHLAEEKLATEFGVSRSPLRKAIATLTAQGI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VSYHENSGTVLNDVLIDSARYVQLMDTIDIFVDAAIIRAAHFGYNIDVEKLHNHLQEMER
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FSYLMDVENYFNEHHRYILCLISFAENPYQVSIAKHIFFQIVHFSDGINIFKAVEIREWT
HHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
NKKSSEIYEFLIQNKIELARKTVKSMFAELTIQAYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITNKYKTLDKMVYNLLLEKIKRGELVPNQHLAEEKLATEFGVSRSPLRKAIATLTAQGI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VSYHENSGTVLNDVLIDSARYVQLMDTIDIFVDAAIIRAAHFGYNIDVEKLHNHLQEMER
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FSYLMDVENYFNEHHRYILCLISFAENPYQVSIAKHIFFQIVHFSDGINIFKAVEIREWT
HHHHHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
NKKSSEIYEFLIQNKIELARKTVKSMFAELTIQAYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA