| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is fsa [H]
Identifier: 116872030
GI number: 116872030
Start: 647390
End: 648040
Strand: Direct
Name: fsa [H]
Synonym: lwe0610
Alternate gene names: 116872030
Gene position: 647390-648040 (Clockwise)
Preceding gene: 116872029
Following gene: 116872032
Centisome position: 23.0
GC content: 38.86
Gene sequence:
>651_bases ATGTTTTTAGATACGGGGAATTTAGAGGAAATAAAGAGAGCGCTTCAATTTCCGTTTTTTGAAGGTGTAACTACGAATCC AACCATTTTATTAAAAGAAAATCAACCAAGAAAAACACATATTGCTCACATCCAAGCCAAAATGGTATTTGTTCAAGCGG CAGGTTTATCAGAAGAAGAAATCTGGGAAGATGTGTTGCGTATTCAAACAATTGAACCAGCACAAGGAACTGTGGTTGGT TTGAAAATCCCAGCCCACGAAGCAGGCATAAAAGTTATCGCCAAAGTGCGTGCCAAGTTCCCAGAGGCAATCATTTTAGC AACAGCGATTTTCTCATCCGAGCAAGGTTATATTGCGGCACTTTCTGGTGCGGACTATTTAGCACCTTATTACAATCGCA TGGAAGTTAGCGGATTAGATGCAGCTAAAACAATAGCGGAACTTCGATATGTGCTAGATCTTCAAGGACTTCTAAATGTG AAAATTATGGGAGCTAGTTTTAAAAATAGCCGTCAAATCATGCAAGCCTTAGCAAGCGGAGCAGATACAGTGACAATCGG TTACGATTTATTCCTACAAATGATGAACAAACCACTAGCATTAGAAAGTATTGAGAAATTTAATGAACATAACGCTGCAT TACCTAAATGA
Upstream 100 bases:
>100_bases GCACAAAAATGCCAACAACTTTGGGGCCGTGAAATGATTGACTGTGTATTTAAACTTTTTTACACTTAAAATGAGAAGAG AACTATGAAGGAGTGAGGAA
Downstream 100 bases:
>100_bases GTAAAAGAGGAAGTTTCCATCGATTTTGGAAACTTCCTCTTTTTTATTTATCTTCATCACGTAATGGTAGGTTGTTTACA TAGCTATCAGAATACTGTAA
Product: transaldolase, putative
Products: D-erythrose phosphate; D-fructose phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MFLDTGNLEEIKRALQFPFFEGVTTNPTILLKENQPRKTHIAHIQAKMVFVQAAGLSEEEIWEDVLRIQTIEPAQGTVVG LKIPAHEAGIKVIAKVRAKFPEAIILATAIFSSEQGYIAALSGADYLAPYYNRMEVSGLDAAKTIAELRYVLDLQGLLNV KIMGASFKNSRQIMQALASGADTVTIGYDLFLQMMNKPLALESIEKFNEHNAALPK
Sequences:
>Translated_216_residues MFLDTGNLEEIKRALQFPFFEGVTTNPTILLKENQPRKTHIAHIQAKMVFVQAAGLSEEEIWEDVLRIQTIEPAQGTVVG LKIPAHEAGIKVIAKVRAKFPEAIILATAIFSSEQGYIAALSGADYLAPYYNRMEVSGLDAAKTIAELRYVLDLQGLLNV KIMGASFKNSRQIMQALASGADTVTIGYDLFLQMMNKPLALESIEKFNEHNAALPK >Mature_216_residues MFLDTGNLEEIKRALQFPFFEGVTTNPTILLKENQPRKTHIAHIQAKMVFVQAAGLSEEEIWEDVLRIQTIEPAQGTVVG LKIPAHEAGIKVIAKVRAKFPEAIILATAIFSSEQGYIAALSGADYLAPYYNRMEVSGLDAAKTIAELRYVLDLQGLLNV KIMGASFKNSRQIMQALASGADTVTIGYDLFLQMMNKPLALESIEKFNEHNAALPK
Specific function: Interact With The Phosphotransfer Signaling Mediated By The Arcb Sensory Kinase. [C]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3A subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081788, Length=215, Percent_Identity=28.3720930232558, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1790382, Length=217, Percent_Identity=34.1013824884793, Blast_Score=94, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR023001 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: 2.2.1.2 [C]
Molecular weight: Translated: 23820; Mature: 23820
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS01054 TRANSALDOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLDTGNLEEIKRALQFPFFEGVTTNPTILLKENQPRKTHIAHIQAKMVFVQAAGLSEEE CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEEEEEECCCCHHH IWEDVLRIQTIEPAQGTVVGLKIPAHEAGIKVIAKVRAKFPEAIILATAIFSSEQGYIAA HHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEE LSGADYLAPYYNRMEVSGLDAAKTIAELRYVLDLQGLLNVKIMGASFKNSRQIMQALASG ECCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCC ADTVTIGYDLFLQMMNKPLALESIEKFNEHNAALPK CCEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFLDTGNLEEIKRALQFPFFEGVTTNPTILLKENQPRKTHIAHIQAKMVFVQAAGLSEEE CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEEEEEECCCCHHH IWEDVLRIQTIEPAQGTVVGLKIPAHEAGIKVIAKVRAKFPEAIILATAIFSSEQGYIAA HHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEE LSGADYLAPYYNRMEVSGLDAAKTIAELRYVLDLQGLLNVKIMGASFKNSRQIMQALASG ECCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCC ADTVTIGYDLFLQMMNKPLALESIEKFNEHNAALPK CCEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Sedoheptulose phosphate; D-glyceraldehyde phosphate [C]
Specific reaction: Sedoheptulose phosphate + D-glyceraldehyde phosphate = D-erythrose phosphate + D-fructose phosphate [C]
General reaction: Aldehyde residue transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA