Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116871983

Identifier: 116871983

GI number: 116871983

Start: 603171

End: 603698

Strand: Direct

Name: 116871983

Synonym: lwe0563

Alternate gene names: NA

Gene position: 603171-603698 (Clockwise)

Preceding gene: 116871980

Following gene: 116871985

Centisome position: 21.43

GC content: 34.09

Gene sequence:

>528_bases
ATGAAGACTTTTACACGAATTCTTGTTTTACTAGCAGGAATTGCAATGATTGTACTTGGAATTTGGTTCTTATTCCATCC
GGGGATTTCTCTATTAACCTCGACATTAATGATTGGATTCTTATTACTGATTTCTGGTATTTTCCACACAATCTCTTATT
TCTCAGACAGAAAATCACAAAATGTTTCTGGTTGGGTACTAGCTGACGGAATTTTATCCATCTTACTAGGTTTCTTGCTA
TTATTTAATGAATTTGAGGGAACGTTAACACTTGTATTACTTTTTGGTATGTGGGTACTGTTTGCTGGTATTATGCGTAC
AATTGGCGCGTTTACTGCCAAACAAAATAATGTACAAGGTTGGGGTTGGATCCTAACAGTTGGTATTATTGGTATCATTG
TTGGATTTATCGCTCTCTTCAATCCAGTTATATCAGCAATTGGAATAGTACTTATCGTTGCAATTTTCTTTATTGTTCAA
GGTATCGGAGCAATTGCAACATTCTTCTTTATTGGTAAAAATAATTAA

Upstream 100 bases:

>100_bases
GTTTTAATTTTCTTTTTTTAGGTTATTATAGTTAAGACTAATAATATTTCATCAAAAGTGGGGTTGAATTAGGACAAACA
AAAGGGAGTTGAAATAATAA

Downstream 100 bases:

>100_bases
GAAAAAAAAGCGAAATCAGCGGTTGATGGCTGGTTTCGCTTTTTTAAAAAATTAATTCAATTGATTTACTGGTTAAAAAT
TCTAGCCATTCTTTGGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKTFTRILVLLAGIAMIVLGIWFLFHPGISLLTSTLMIGFLLLISGIFHTISYFSDRKSQNVSGWVLADGILSILLGFLL
LFNEFEGTLTLVLLFGMWVLFAGIMRTIGAFTAKQNNVQGWGWILTVGIIGIIVGFIALFNPVISAIGIVLIVAIFFIVQ
GIGAIATFFFIGKNN

Sequences:

>Translated_175_residues
MKTFTRILVLLAGIAMIVLGIWFLFHPGISLLTSTLMIGFLLLISGIFHTISYFSDRKSQNVSGWVLADGILSILLGFLL
LFNEFEGTLTLVLLFGMWVLFAGIMRTIGAFTAKQNNVQGWGWILTVGIIGIIVGFIALFNPVISAIGIVLIVAIFFIVQ
GIGAIATFFFIGKNN
>Mature_175_residues
MKTFTRILVLLAGIAMIVLGIWFLFHPGISLLTSTLMIGFLLLISGIFHTISYFSDRKSQNVSGWVLADGILSILLGFLL
LFNEFEGTLTLVLLFGMWVLFAGIMRTIGAFTAKQNNVQGWGWILTVGIIGIIVGFIALFNPVISAIGIVLIVAIFFIVQ
GIGAIATFFFIGKNN

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19090; Mature: 19090

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFTRILVLLAGIAMIVLGIWFLFHPGISLLTSTLMIGFLLLISGIFHTISYFSDRKSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NVSGWVLADGILSILLGFLLLFNEFEGTLTLVLLFGMWVLFAGIMRTIGAFTAKQNNVQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
WGWILTVGIIGIIVGFIALFNPVISAIGIVLIVAIFFIVQGIGAIATFFFIGKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTFTRILVLLAGIAMIVLGIWFLFHPGISLLTSTLMIGFLLLISGIFHTISYFSDRKSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NVSGWVLADGILSILLGFLLLFNEFEGTLTLVLLFGMWVLFAGIMRTIGAFTAKQNNVQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
WGWILTVGIIGIIVGFIALFNPVISAIGIVLIVAIFFIVQGIGAIATFFFIGKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA