Click here to switch to the map view.

The map label for this gene is inlJ [H]

Identifier: 116871962

GI number: 116871962

Start: 575985

End: 577727

Strand: Direct

Name: inlJ [H]

Synonym: lwe0542

Alternate gene names: 116871962

Gene position: 575985-577727 (Clockwise)

Preceding gene: 116871961

Following gene: 116871963

Centisome position: 20.47

GC content: 37.29

Gene sequence:

>1743_bases
ATGAACAAAAAATTAGGTCTGTTTTTGTTCGCGGTATTGCTAACGTTCGGCGGATTTCTTTTAGGAAATTCTCCAGTATA
TGCCGCAGAAGGAGATACAAGTAGTATCACCTACAAATACGTTGATTTCGATACATTAACGACTGAACAAAAAAATAGTA
TCATCAAAGGGAACCCAACTGAGACTCTCAACAACGATTTTGAGAACTATTCCTTCGTTTACCAAAAAAATACTTCTGGA
GATTCTGCCAGTACAGATAATAATGCAGCAGGAGGAAGTAATGGTAACGGAAATTCAGTTGATGGAAATAGTACTTCTGG
GAACGCATCCAGTGGAAATTCTTTAATAAAAACCGGTGATGTGGGACCAGATATTTATTTAATCATGCTTGGTTTTGTCT
TAGTGGGAGGCGGGATTGGACTGCTAACTTTGAAAAAAAGACATGCCAAACAACTGTTGTTATTCCTAATCGTATTCGGC
GGTGGTAGCATAATGATTGGTTCCATTGCTCAAGCGGTGGAAAACAGCAATTTAAAACCACAAGAAACAACGACCGTCAC
AAAAGGCACTAAAGAAACGAAAAAACCTGGAAACATCGAAGGTTACACTTATGTGGGCTATATTCATACAAGTAAAAATG
ATACGACGCCAACACCACCAGTGGAACAAGGAACTGTCACAGTGAATTACCAAGATGAACAAGGAAACTCCGTAGCGCCA
AGTGAAACACTAAAAGGTGAGGTTGGAAAAACCTACAAAACGGTACAAAAAGACGTTGAAGGTTACGACTTTAAAGAAGT
ACAAGGGAACGCAACTGGCGAATTTACAACAAAAGCGCAAGTTGTAAACTATATTTACGCTAAAACAGTTACACCAGTAG
AACAAGGAACCGTCACAGTCAATTACCAAGATGAACAAGGAAACACCGTAGCGCCAACTGAAACGTTAAAAGGTGATGTT
GGAGAAACCTACACAACTGTTCAAAAAGACGTTGAAGGCTATGACTTTAAAGAAGTACAAGGTAACACAACAGGCGAATT
TACTAAAGAATCGCAAGTTGTAACGTATGTTTACACTCAAATACCTGTACCTGCTGCGAACCTAACTATTGAATATCTTG
ATGAAAATGGAAATCAAATCCATGAACCAAAAATAATCAGCGGGAATGTGGGAGATCCTTACGATGTAACAGGAGATCTT
GATAAACTTCAGATTGAAGGTTACACGATTGATACAACTAAATTACCAGCCAATGCAACTGGCGTACTATCGAATGAACC
AATCCAAGTAATCTATGTTTACAATAAAAATCCATTAGCTGATGTGAAGATAACAGTTAAATTTGTGGATTATCAAGGGA
ATCCATTTACTGTACCGGATTTTTCCATATTAAAAGATGGTGCATTTGTGCCGCTTTATCCTAATCTAGATCAATATAAG
GTACAATTAGATTACAACAGACAAACATATAATCAAAACCAAGTAGTACCCGATATTGTTATCCCTGGAAAAGAAGGAGA
TACGTACTCTTTACCAGCAAAAATGAATTTCAATATAATTGATGACAAAGGAAATAGTGTTCCATATCTTATTTCTCAAG
ATGAGGATGAAGGTTCATCTGGGGTTATTAATTGGTCTAACATCACATCAATACCTAATAATCGAGAAGGAACCTTAACG
GATCAAGATATTGTAGTCACTTATAAAATTGAAACATATACCATCATTATGCCGGCTCCGTGA

Upstream 100 bases:

>100_bases
TTTTTTCACAAAAGCTTGGAGATAATAAAATCTATTATTGGAAAAGCAACGCGCGTCCATATTTTAGTAGATGGAAAAAT
TATGAAGGAGGAAAACTAAT

Downstream 100 bases:

>100_bases
TTAAGTAATAAAAAAGTTATAGAAGCAACAGAATTAAAAAATACGTATCTAAAATCTCAGTAGATTTTAGATGCGTATTT
TTTTAATAGATTTAATAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MNKKLGLFLFAVLLTFGGFLLGNSPVYAAEGDTSSITYKYVDFDTLTTEQKNSIIKGNPTETLNNDFENYSFVYQKNTSG
DSASTDNNAAGGSNGNGNSVDGNSTSGNASSGNSLIKTGDVGPDIYLIMLGFVLVGGGIGLLTLKKRHAKQLLLFLIVFG
GGSIMIGSIAQAVENSNLKPQETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTTPTPPVEQGTVTVNYQDEQGNSVAP
SETLKGEVGKTYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVNYIYAKTVTPVEQGTVTVNYQDEQGNTVAPTETLKGDV
GETYTTVQKDVEGYDFKEVQGNTTGEFTKESQVVTYVYTQIPVPAANLTIEYLDENGNQIHEPKIISGNVGDPYDVTGDL
DKLQIEGYTIDTTKLPANATGVLSNEPIQVIYVYNKNPLADVKITVKFVDYQGNPFTVPDFSILKDGAFVPLYPNLDQYK
VQLDYNRQTYNQNQVVPDIVIPGKEGDTYSLPAKMNFNIIDDKGNSVPYLISQDEDEGSSGVINWSNITSIPNNREGTLT
DQDIVVTYKIETYTIIMPAP

Sequences:

>Translated_580_residues
MNKKLGLFLFAVLLTFGGFLLGNSPVYAAEGDTSSITYKYVDFDTLTTEQKNSIIKGNPTETLNNDFENYSFVYQKNTSG
DSASTDNNAAGGSNGNGNSVDGNSTSGNASSGNSLIKTGDVGPDIYLIMLGFVLVGGGIGLLTLKKRHAKQLLLFLIVFG
GGSIMIGSIAQAVENSNLKPQETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTTPTPPVEQGTVTVNYQDEQGNSVAP
SETLKGEVGKTYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVNYIYAKTVTPVEQGTVTVNYQDEQGNTVAPTETLKGDV
GETYTTVQKDVEGYDFKEVQGNTTGEFTKESQVVTYVYTQIPVPAANLTIEYLDENGNQIHEPKIISGNVGDPYDVTGDL
DKLQIEGYTIDTTKLPANATGVLSNEPIQVIYVYNKNPLADVKITVKFVDYQGNPFTVPDFSILKDGAFVPLYPNLDQYK
VQLDYNRQTYNQNQVVPDIVIPGKEGDTYSLPAKMNFNIIDDKGNSVPYLISQDEDEGSSGVINWSNITSIPNNREGTLT
DQDIVVTYKIETYTIIMPAP
>Mature_580_residues
MNKKLGLFLFAVLLTFGGFLLGNSPVYAAEGDTSSITYKYVDFDTLTTEQKNSIIKGNPTETLNNDFENYSFVYQKNTSG
DSASTDNNAAGGSNGNGNSVDGNSTSGNASSGNSLIKTGDVGPDIYLIMLGFVLVGGGIGLLTLKKRHAKQLLLFLIVFG
GGSIMIGSIAQAVENSNLKPQETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTTPTPPVEQGTVTVNYQDEQGNSVAP
SETLKGEVGKTYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVNYIYAKTVTPVEQGTVTVNYQDEQGNTVAPTETLKGDV
GETYTTVQKDVEGYDFKEVQGNTTGEFTKESQVVTYVYTQIPVPAANLTIEYLDENGNQIHEPKIISGNVGDPYDVTGDL
DKLQIEGYTIDTTKLPANATGVLSNEPIQVIYVYNKNPLADVKITVKFVDYQGNPFTVPDFSILKDGAFVPLYPNLDQYK
VQLDYNRQTYNQNQVVPDIVIPGKEGDTYSLPAKMNFNIIDDKGNSVPYLISQDEDEGSSGVINWSNITSIPNNREGTLT
DQDIVVTYKIETYTIIMPAP

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 63006; Mature: 63006

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00888 CNMP_BINDING_1 ; PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLGLFLFAVLLTFGGFLLGNSPVYAAEGDTSSITYKYVDFDTLTTEQKNSIIKGNPT
CCCCHHHHHHHHHHHHCCEEECCCCEEEECCCCCEEEEEEEECCEECCHHCCCEECCCCC
ETLNNDFENYSFVYQKNTSGDSASTDNNAAGGSNGNGNSVDGNSTSGNASSGNSLIKTGD
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
VGPDIYLIMLGFVLVGGGIGLLTLKKRHAKQLLLFLIVFGGGSIMIGSIAQAVENSNLKP
CCCHHHHHHHHHHHHCCCEEEEEECHHHHHHEEEEEEEECCCCEEEHHHHHHHHCCCCCC
QETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTTPTPPVEQGTVTVNYQDEQGNSVAP
CCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
SETLKGEVGKTYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVNYIYAKTVTPVEQGTVTV
CHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEHHHHHHHHHHHEECCCCCCCEEEE
NYQDEQGNTVAPTETLKGDVGETYTTVQKDVEGYDFKEVQGNTTGEFTKESQVVTYVYTQ
EEECCCCCEECCCHHHCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEEE
IPVPAANLTIEYLDENGNQIHEPKIISGNVGDPYDVTGDLDKLQIEGYTIDTTKLPANAT
CCCCCCCEEEEEEECCCCEECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
GVLSNEPIQVIYVYNKNPLADVKITVKFVDYQGNPFTVPDFSILKDGAFVPLYPNLDQYK
EEECCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCCEEEECCCCCEEE
VQLDYNRQTYNQNQVVPDIVIPGKEGDTYSLPAKMNFNIIDDKGNSVPYLISQDEDEGSS
EEEEECCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEEECCCCCCCCEEEECCCCCCCC
GVINWSNITSIPNNREGTLTDQDIVVTYKIETYTIIMPAP
CEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MNKKLGLFLFAVLLTFGGFLLGNSPVYAAEGDTSSITYKYVDFDTLTTEQKNSIIKGNPT
CCCCHHHHHHHHHHHHCCEEECCCCEEEECCCCCEEEEEEEECCEECCHHCCCEECCCCC
ETLNNDFENYSFVYQKNTSGDSASTDNNAAGGSNGNGNSVDGNSTSGNASSGNSLIKTGD
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
VGPDIYLIMLGFVLVGGGIGLLTLKKRHAKQLLLFLIVFGGGSIMIGSIAQAVENSNLKP
CCCHHHHHHHHHHHHCCCEEEEEECHHHHHHEEEEEEEECCCCEEEHHHHHHHHCCCCCC
QETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTTPTPPVEQGTVTVNYQDEQGNSVAP
CCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
SETLKGEVGKTYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVNYIYAKTVTPVEQGTVTV
CHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEHHHHHHHHHHHEECCCCCCCEEEE
NYQDEQGNTVAPTETLKGDVGETYTTVQKDVEGYDFKEVQGNTTGEFTKESQVVTYVYTQ
EEECCCCCEECCCHHHCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEEE
IPVPAANLTIEYLDENGNQIHEPKIISGNVGDPYDVTGDLDKLQIEGYTIDTTKLPANAT
CCCCCCCEEEEEEECCCCEECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
GVLSNEPIQVIYVYNKNPLADVKITVKFVDYQGNPFTVPDFSILKDGAFVPLYPNLDQYK
EEECCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCCEEEECCCCCEEE
VQLDYNRQTYNQNQVVPDIVIPGKEGDTYSLPAKMNFNIIDDKGNSVPYLISQDEDEGSS
EEEEECCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEEECCCCCCCCEEEECCCCCCCC
GVINWSNITSIPNNREGTLTDQDIVVTYKIETYTIIMPAP
CEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA