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The map label for this gene is ydaM [H]

Identifier: 116871909

GI number: 116871909

Start: 527034

End: 528284

Strand: Direct

Name: ydaM [H]

Synonym: lwe0489

Alternate gene names: 116871909

Gene position: 527034-528284 (Clockwise)

Preceding gene: 116871908

Following gene: 116871910

Centisome position: 18.73

GC content: 38.53

Gene sequence:

>1251_bases
ATGGTTGTTGCAGATTATTTAGCATTATTCGCAGTGATATGTATTTGGGGACTTTTGCTCATTAATATCGTATTAATCGT
TGCGGGATACGTCTATTATTTAAAAAATGAAGCGCGTAAAGTACCTGAAATACCAGCGGAAGTACCATTTGTTTCCATCA
TGGTGCCGGCTCATAATGAAGGAAAAGTCATCGTGAAGACAGTAGAGTCACTTCTTGCTTTTGATTATCCTAAAGATTGC
TACGAAATTATTGTCATTAATGATAATTCCTCGGATAATAGCGCAGAGCTTTTAGCGGCCATTCAAGCGAAAAATCCGAC
ACGCTTGTTAAAAATTATTAACACGGATAACATCACGGGAGGAAAAGGGAAATCAAACGCGCTTAATATTGGTTTTGCTG
AAAGTCGCGGGGAACTTGTGGCGATTTATGATGCGGATAATACGCCAGAACGGCAGGCGCTAAGAATTCTTGTTGGCGAG
ATTACGAATGATGCAAAACTTGGCGCAGTTATTGGTAAATTTAGAACGCGAAATCGAGATGCTAGCTGGTTAACACGCTT
TATAAATATAGAAACGTTGAGCTTTCAGTGGATGGCTCAAGCCGGCAGATGGGCACTTTTCAAACTCTGCACAATTCCTG
GTACCAATTTTATTGTGAGAAGATCGCTCTTAGAAGAAATTGGTGGTTGGGATGTGAAAGCTGTCGCGGAAGATACCGAG
ATTAGTTTTCGGATTTATATGATGGGTTACCGAATCAAATTCCAAGCGAAGGCTGTGACATGGGAACAAGAACCACAAAC
ATTGCCAGTCTGGTTCAAACAACGATCAAGATGGGCAAAAGGCAATATTTATGTGATTTTGAAAAACGTACCACTACTTT
TCAAACGAGAAGGTAGACGCGTTCGATTTGATATTTTGTACTTTTTATCGATTTACTTTTTACTCTTAACTTCCTTGATT
GTAAGTGATATTTTACTCGTATTATATGCGCTTGGACTTGTACATACAACGCTTGCTGGTCTTAGCGGGGCGCTGTGGTT
ACTAGCTATTTTACTTTTTGTCGCAGGTACCTTTATTACTTTGACCACTGAAAAAGGGGAAATTAGTTTTTCAAATTTGT
TATTTATTTTATTGATGTATGTGACTTATTGCCAACTTTGGATGGTGGTCGCCGCATATGGATTCTTTATTTTCTTAAAA
GATACTGTACTAAAAAGAGAAACAAAATGGTATAAAACCGAGCGTTTCTAA

Upstream 100 bases:

>100_bases
TTCACGATAGTTATTGTGCTTTCGCTTGGGATTATTGGAATTTTATTTGTCTTTGGATACCGGCTTTATATGAAAAAATA
TATGAAATGAGGTGAAATAA

Downstream 100 bases:

>100_bases
AAAGGAGAGTGCCTAATGAAAAAATTAGCTGTAATGGGGCTGCTTGTTTTCGCCGTACTATTTCTGTATAGGCCAGACGT
TTTCGCAGCAGATAAAAACT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSIMVPAHNEGKVIVKTVESLLAFDYPKDC
YEIIVINDNSSDNSAELLAAIQAKNPTRLLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGE
ITNDAKLGAVIGKFRTRNRDASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE
ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRRVRFDILYFLSIYFLLLTSLI
VSDILLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFILLMYVTYCQLWMVVAAYGFFIFLK
DTVLKRETKWYKTERF

Sequences:

>Translated_416_residues
MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSIMVPAHNEGKVIVKTVESLLAFDYPKDC
YEIIVINDNSSDNSAELLAAIQAKNPTRLLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGE
ITNDAKLGAVIGKFRTRNRDASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE
ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRRVRFDILYFLSIYFLLLTSLI
VSDILLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFILLMYVTYCQLWMVVAAYGFFIFLK
DTVLKRETKWYKTERF
>Mature_416_residues
MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSIMVPAHNEGKVIVKTVESLLAFDYPKDC
YEIIVINDNSSDNSAELLAAIQAKNPTRLLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGE
ITNDAKLGAVIGKFRTRNRDASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE
ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRRVRFDILYFLSIYFLLLTSLI
VSDILLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFILLMYVTYCQLWMVVAAYGFFIFLK
DTVLKRETKWYKTERF

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=410, Percent_Identity=26.8292682926829, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI87082284, Length=368, Percent_Identity=25.5434782608696, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 47323; Mature: 47323

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSIMVPAHNE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
GKVIVKTVESLLAFDYPKDCYEIIVINDNSSDNSAELLAAIQAKNPTRLLKIINTDNITG
CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHEEEEEECCCCCC
GKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRD
CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
ASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE
HHHHHHHHEEEEEEHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC
ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRR
EEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEECCCCE
VRFDILYFLSIYFLLLTSLIVSDILLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFIT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LTTEKGEISFSNLLFILLMYVTYCQLWMVVAAYGFFIFLKDTVLKRETKWYKTERF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSIMVPAHNE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
GKVIVKTVESLLAFDYPKDCYEIIVINDNSSDNSAELLAAIQAKNPTRLLKIINTDNITG
CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHEEEEEECCCCCC
GKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRD
CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
ASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE
HHHHHHHHEEEEEEHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC
ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRR
EEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEECCCCE
VRFDILYFLSIYFLLLTSLIVSDILLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFIT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LTTEKGEISFSNLLFILLMYVTYCQLWMVVAAYGFFIFLKDTVLKRETKWYKTERF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]