| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yoaV [H]
Identifier: 116871884
GI number: 116871884
Start: 498216
End: 499175
Strand: Direct
Name: yoaV [H]
Synonym: lwe0464
Alternate gene names: 116871884
Gene position: 498216-499175 (Clockwise)
Preceding gene: 116871883
Following gene: 116871885
Centisome position: 17.7
GC content: 37.92
Gene sequence:
>960_bases TTGCAGAATGAAAAAGCACCAGTGGGACTTTATTTTTTATTAATTGCAGTAATGGCCAGTTGGGGATTTAATGTAACGAT GACGAAGGTATTAGTCAGTTATTTTCCAACTGTTACGATGACATCTTTTCGGATTTTCACTGCAGCAATTACCGTTATTA TTATTTTATTTATCACGAAAAAATTACGCTTACCTACAAAACGGGAGCTAGGGTTAATTTTTCTTGCTAGTATTTTTAAT ATTGTTATTCATCATTTTTTCTTATCGAACGGGCTTCGGCTGACGACGGGTACAAATGCGGGACTTATACTTGGTTCTGC CCCAATTATTGTTGCGATTTTTTCTGTGATTTTTCTTCGTGAACGAATTGGTGCTTGGCGTGCGGTTGGTTTTTTAGCGG GGATTTTTGGTGTGAGTTTGGTCGTTCTTTCTAATGGAACCGGAATAAGTGGGATTTCACTTGGGGATATTGCTATTTTT ATTGCGATGGCTTCTCAGGCATTTAGTTTTATTATTATTAAAAAGCTCGCAGGATCGATGGATACGGGGTTAATGACGGG ATATATGCTATTCCTTGGCTCGGTTATGTTGTTTGCTTTAAGTCGCTTCATGGAGCCAAATGGCATGTCAGAATTAGTGG CGGTTCATTCATGGAAGTTATGGCTCTTGTTTGTTGTTTCAGCAGTCGTTGCTACGGCGTTTGGCAATTTTGTATATAAC TTTGCGGTCGGGAAAATTGGACCTTCACGCTCAGCTATTTTTATGAATTTTAATCCATTATTTTCTCTTATTGGCGCACT GCTTTTCCTAGGGGAATCAATCAAAGTCCCGCAATTAATTGGATTTATTTTTATAATTATTGGCGTCTTGCTTGGATCAG GAGCTCTAATGGATCTTATTTATGAACGCAAAAAAATAAAGGTACGTGATCCTGAAAAGCTTCTCGAAAAAGAAGTTTGA
Upstream 100 bases:
>100_bases CCGCGTTATAGCTTTGTGGAAAGCTGCGGAAGATGACGCTATGAAATGCCCCTTAAAGTAATTTAAGGGGTATTTTTTTA TAAAAAAAGGAGTGTTTGTT
Downstream 100 bases:
>100_bases CTTTTATTGACCTTTATATTATAATTTGGTTAGTTACTTATTAAAAGTAACTTGATAATGATAGGAGGGATAGCATGAAA TTGTTATTAAAAAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MQNEKAPVGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKLRLPTKRELGLIFLASIFN IVIHHFFLSNGLRLTTGTNAGLILGSAPIIVAIFSVIFLRERIGAWRAVGFLAGIFGVSLVVLSNGTGISGISLGDIAIF IAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFALSRFMEPNGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYN FAVGKIGPSRSAIFMNFNPLFSLIGALLFLGESIKVPQLIGFIFIIIGVLLGSGALMDLIYERKKIKVRDPEKLLEKEV
Sequences:
>Translated_319_residues MQNEKAPVGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKLRLPTKRELGLIFLASIFN IVIHHFFLSNGLRLTTGTNAGLILGSAPIIVAIFSVIFLRERIGAWRAVGFLAGIFGVSLVVLSNGTGISGISLGDIAIF IAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFALSRFMEPNGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYN FAVGKIGPSRSAIFMNFNPLFSLIGALLFLGESIKVPQLIGFIFIIIGVLLGSGALMDLIYERKKIKVRDPEKLLEKEV >Mature_319_residues MQNEKAPVGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKLRLPTKRELGLIFLASIFN IVIHHFFLSNGLRLTTGTNAGLILGSAPIIVAIFSVIFLRERIGAWRAVGFLAGIFGVSLVVLSNGTGISGISLGDIAIF IAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFALSRFMEPNGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYN FAVGKIGPSRSAIFMNFNPLFSLIGALLFLGESIKVPQLIGFIFIIIGVLLGSGALMDLIYERKKIKVRDPEKLLEKEV
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34844; Mature: 34844
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNEKAPVGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITK CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KLRLPTKRELGLIFLASIFNIVIHHFFLSNGLRLTTGTNAGLILGSAPIIVAIFSVIFLR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHH ERIGAWRAVGFLAGIFGVSLVVLSNGTGISGISLGDIAIFIAMASQAFSFIIIKKLAGSM HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DTGLMTGYMLFLGSVMLFALSRFMEPNGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYN CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVGKIGPSRSAIFMNFNPLFSLIGALLFLGESIKVPQLIGFIFIIIGVLLGSGALMDLI HHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH YERKKIKVRDPEKLLEKEV HHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MQNEKAPVGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITK CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KLRLPTKRELGLIFLASIFNIVIHHFFLSNGLRLTTGTNAGLILGSAPIIVAIFSVIFLR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHH ERIGAWRAVGFLAGIFGVSLVVLSNGTGISGISLGDIAIFIAMASQAFSFIIIKKLAGSM HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DTGLMTGYMLFLGSVMLFALSRFMEPNGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYN CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVGKIGPSRSAIFMNFNPLFSLIGALLFLGESIKVPQLIGFIFIIIGVLLGSGALMDLI HHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH YERKKIKVRDPEKLLEKEV HHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]