| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is aroE [H]
Identifier: 116871881
GI number: 116871881
Start: 495636
End: 496511
Strand: Direct
Name: aroE [H]
Synonym: lwe0461
Alternate gene names: 116871881
Gene position: 495636-496511 (Clockwise)
Preceding gene: 116871880
Following gene: 116871882
Centisome position: 17.61
GC content: 37.9
Gene sequence:
>876_bases ATGACAAACAAAATCACGGAAAGAATTACAGGACACACAGAATTAATCGGGTTAATTGCCACTCCAATCAGACACAGTTT ATCACCAACAATGCACAACGAAGCTTTTGCAAAACTGGGACTTGATTATGTATACCTTGCTTTTGAAGTTGGAGACAAAG AATTAAAAGATGTCGTTCAAGGATTCCGCGCAATGAATTTACGTGGCTGGAACGTTTCTATGCCAAACAAAACGAATATC CATAAATACTTAGATAAACTTTCTCCAGCGGCTGAACTTGTTGGAGCAGTAAATACTGTTGTTAATGATGATGGTGTATT AACTGGCCACATTACAGATGGAACTGGTTATATGCGTGCTTTAAAAGAAGCAGGACATGATATTATCGGCAAAAAAATGA CAATCTGTGGCGCTGGTGGTGCGGCAACAGCTATTTGCATCCAAGCAGCTCTTGATGGTGTGAAAGAAATCTCGATTTTC AATAGAAAAGATGATTTTTACGCTAATGCAGAGAAAACAGTAGAAAAAATCAATTCCAAAACAGATTGTAAAGCACAATT ATTTGATATCGAAGACCATGAACAATTGCGTAAAGAAATTGCTGAAAGTGTTATTTTCACGAATGCAACTGGTGTTGGTA TGAAACCTTTCGAAGGAGAAACACTTTTACCAAGTGCGGATATGCTTCGTCCAGAATTAATCGTTTCAGATGTTGTCTAC AAACCAACCAAAACAAGATTGCTTGAAATTGCGGAAGAACAAGGCTGCCAAACACTTAACGGCTTAGGCATGATGCTGTG GCAAGGTGCGAAAGCTTTCGAAATTTGGACACACAAAGAAATGCCAGTAGATTACATTAAAGAAATCCTATTTTAA
Upstream 100 bases:
>100_bases ATACGAATTGGCAGAGCGGATTCCGCTTTGCCACATTCGCTCTTTATATAAGTTCACATTTTCACAAATAAACCTTAATT TGGAAAGGAACGATGTTATT
Downstream 100 bases:
>100_bases AAACTTGCAATATAATAAGGTTATCGCTAATCTTAAGACATCATATCGAATGAGGAGAATTATACATGAATAAAGTAGTT GTTAAGAATGTGACGTTTGG
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNI HKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIF NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY KPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF
Sequences:
>Translated_291_residues MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNI HKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIF NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY KPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF >Mature_290_residues TNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIH KYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFN RKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYK PTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=282, Percent_Identity=48.936170212766, Blast_Score=308, Evalue=3e-85, Organism=Escherichia coli, GI1789675, Length=273, Percent_Identity=27.8388278388278, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320332, Length=285, Percent_Identity=28.7719298245614, Blast_Score=82, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 32161; Mature: 32030
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQ CCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH GFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRA HHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH LKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK HHHCCHHHHCCEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCCCCHHCCHHHHHHHHCCC TDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHC KPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHC >Mature Secondary Structure TNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQ CCHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH GFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRA HHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH LKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK HHHCCHHHHCCEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCCCCHHCCHHHHHHHHCCC TDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHC KPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]