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The map label for this gene is nudF [H]

Identifier: 116871878

GI number: 116871878

Start: 491679

End: 492407

Strand: Direct

Name: nudF [H]

Synonym: lwe0458

Alternate gene names: 116871878

Gene position: 491679-492407 (Clockwise)

Preceding gene: 116871877

Following gene: 116871880

Centisome position: 17.47

GC content: 38.55

Gene sequence:

>729_bases
ATGACAGAAGAATTTGTGAAAAAAGAAGATGCGCTAAAAAATTATAATGCGAAGGAATTTCGTACACCTGATGGCTATAC
AAGTGATATGATTTTAACTACTGTAAAAGAATGGAATGGGCAACAAACATTGCATATTCTATTGATTAAGCGAGGACTGA
CGAATGCAGAAGGTAGACCGAATATCGAAGGCGGAAAATGGGCAGTTCCAGGTGGATTTGTTGAAGAAGGCGAGTCTGCA
GAACAAACAGCAGAACGTGAATTAGAAGAGGAAACAAGTTTGACAAATATTCCGCTGATTCCTTTTGGAGTATATGACAA
ACCTGGGCGTGATCCTCGTGGTTGGATAATTTCGCGTGCTTTTTATGCGATTGTACCACCAGAAGCTTTGGAAAAACGTG
CGGCTGGCGATGATGCAGCGGAAATTGGTCTCTTTCCAATGACGGAAGCATTAGAATTACCATTAGCATTTGATCACTTA
GATATGTTGAAAAAAGCATTTAACGCAATTACCGAAGAATTTTTACTTACAACGGCGATTCGCGATTTTCTACCAGAAAC
TTTTTCAGCTGAATTACTTTATCAAACCTTGAGTGGATGCACAAAGCCGGGTATATTACCTGATGAAGATGAATTTATGA
GCAATATGGAGTATTTACCGTATTTAGAAAAAGTAGGCGAATTATACCGATTTAATGCCGATGCAGAAGCGGGAAGTATT
TATTTTTAA

Upstream 100 bases:

>100_bases
AAAAATAAGAGGATTTGTTCCAGCAATTGGAACAAATTCTTTTTTTTATGATACTATAATGGGGAGAGCCTAACTACACA
AAAAGGAGTCTGAATAGTTT

Downstream 100 bases:

>100_bases
TAGCAAAAAGAGCAAAATCGCAAACGCGGATTTTGCTCTTTTTTTATAAGAAATGTTTTTCACCGTAACGTAAAGCAAAA
TCTTTGAAAGCTTTAGATGC

Product: MutT/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTEEFVKKEDALKNYNAKEFRTPDGYTSDMILTTVKEWNGQQTLHILLIKRGLTNAEGRPNIEGGKWAVPGGFVEEGESA
EQTAERELEEETSLTNIPLIPFGVYDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHL
DMLKKAFNAITEEFLLTTAIRDFLPETFSAELLYQTLSGCTKPGILPDEDEFMSNMEYLPYLEKVGELYRFNADAEAGSI
YF

Sequences:

>Translated_242_residues
MTEEFVKKEDALKNYNAKEFRTPDGYTSDMILTTVKEWNGQQTLHILLIKRGLTNAEGRPNIEGGKWAVPGGFVEEGESA
EQTAERELEEETSLTNIPLIPFGVYDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHL
DMLKKAFNAITEEFLLTTAIRDFLPETFSAELLYQTLSGCTKPGILPDEDEFMSNMEYLPYLEKVGELYRFNADAEAGSI
YF
>Mature_241_residues
TEEFVKKEDALKNYNAKEFRTPDGYTSDMILTTVKEWNGQQTLHILLIKRGLTNAEGRPNIEGGKWAVPGGFVEEGESAE
QTAERELEEETSLTNIPLIPFGVYDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLD
MLKKAFNAITEEFLLTTAIRDFLPETFSAELLYQTLSGCTKPGILPDEDEFMSNMEYLPYLEKVGELYRFNADAEAGSIY
F

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 27220; Mature: 27089

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEFVKKEDALKNYNAKEFRTPDGYTSDMILTTVKEWNGQQTLHILLIKRGLTNAEGRP
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
NIEGGKWAVPGGFVEEGESAEQTAERELEEETSLTNIPLIPFGVYDKPGRDPRGWIISRA
CCCCCCEECCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHH
FYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFNAITEEFLLTTAI
HHEECCHHHHHHHCCCCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDFLPETFSAELLYQTLSGCTKPGILPDEDEFMSNMEYLPYLEKVGELYRFNADAEAGSI
HHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
YF
CC
>Mature Secondary Structure 
TEEFVKKEDALKNYNAKEFRTPDGYTSDMILTTVKEWNGQQTLHILLIKRGLTNAEGRP
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
NIEGGKWAVPGGFVEEGESAEQTAERELEEETSLTNIPLIPFGVYDKPGRDPRGWIISRA
CCCCCCEECCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHH
FYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFNAITEEFLLTTAI
HHEECCHHHHHHHCCCCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDFLPETFSAELLYQTLSGCTKPGILPDEDEFMSNMEYLPYLEKVGELYRFNADAEAGSI
HHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
YF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]