| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is inlJ [H]
Identifier: 116871850
GI number: 116871850
Start: 458933
End: 460444
Strand: Direct
Name: inlJ [H]
Synonym: lwe0430
Alternate gene names: 116871850
Gene position: 458933-460444 (Clockwise)
Preceding gene: 116871849
Following gene: 116871851
Centisome position: 16.31
GC content: 34.59
Gene sequence:
>1512_bases ATGAACAAAAAACTTATTCTTAGTTTATTTACAGCTACCTTACTGCTTTTAGGTTTTGCTTTTGGGGGCAATACAGTAAA TGCAGCTGAAAATAACACTAGTAAGATTACGTACAACTATGTTGATTTTAATACATTAACGACTACACAAAAAAATAGTA TCATCAAAGGCAATCCAGATGAAATCAATAAAAATGATTTTGAAAATTACTCATTTGTCTATCAAAAAAATGATTCACAA ATGACTGTAAACACAGGAGATAATAATTCTGGAAACACTGGCTCTACGAATAATACTCCAAACGGACAAAACTTACTAAA AACGGGGGATGTAGGTTCTAATATATATTTAATTATTTTAGGATTTGTCCTTTTAGGTGGAGGAATTACTCTTCTAACAT TGAAAAAGAAAAAAGCACATAAATTTCTTTTGTTTCTTATCATGTTCACAGGTGCCAGCTTACTAGCAGGACCTATCGTT CAAGCAGTGGAAAACAGCAATTTAAAACCACAAGAAACAACGACCGTCACAAAAGGCACTAAAGAAACGAAAAAACCTGG AAACATCGAAGGCTACACCTATGTAGGCTATATCCACACAAGTAAAAATGACACAGCGCCAACACCACCAGTAGAACAAG GAACTGTCACAGTCAATTACCAAGATGAACAAGGAAATTCCTTAGCGCCAAGTGAAACACTAAAAGGTGACGTTGGAGAA ACCTACAAAACGGTACAAAAAGACGTTGAAGGTTACGACTTTAAAGAAGTACAAGGTAACGCAACTGGCGAATTTACAAC AAAAGCGCAAGTTGTAACATACATTTACACCAAAACACCTATACCTGCCGCAAATCTAACCATTGAATACCTTGATGAAA ATGGCAATCAAATCCATGAACCAAAAATAATCAGTGGTAATATTGGAGACCCCTATGATGTAACAGGAGATATGGACGAA CTTCAGATTGAAGGTTACACGATAGATACGAATAACTTACCAACCAATGCAAAAGGTGTACTGTCTAATGAACCAATTCA AGTAAAATATATCTACATTAAAAATGTAAAAGATGTTACTCTGACTATTAAGTTTATCAACAGACTGACTGGTGGGCCGT TTGTTTTGGATGATTTAACGAAGATTCAAAACGGCGATTTAGTGCCACTTTATCCTAATTTAGATCAATACCATATGCAA TTAAATTATAATAATCAACTATATAATCAAGGAGAAGCAGTGCCAGATATTGTTATTCAAGGAAAAGAAGGAGATTCATA TTCTTTACCTGAAAGAATGATTTTCAGTATAGTAGATGATAAAGGGAATGTACTTCCTTATGTTATAGGACCTCCAGACG AAGAAGGAGCATCTTACGGAATTATAAATTGGGAGAATATAGAACTAGTTCCAGATAATATTGAAGGTACTCTGTCAGCC GATAACACAGTGGTTACTTACAGTATGGATAGATATCCTATTGAAATAGCACCGCCTACAGAAGATGAATAA
Upstream 100 bases:
>100_bases ATAATTAAAATGATAGAATAAAAAAACGCTTCGATATAAAATACTGAATTTTTAAATCTACTTATTATTATTAATCAAAT GGGAGAGGAAGTTATTTAAA
Downstream 100 bases:
>100_bases GTAAGAAGTGAAAAATTAATTATTACTTTTAATAAATCCAATCCTTTTAAAGGGTTGGGTTTATTTGGTTTTTAAATCAT TGTATTTGCGTAAAAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MNKKLILSLFTATLLLLGFAFGGNTVNAAENNTSKITYNYVDFNTLTTTQKNSIIKGNPDEINKNDFENYSFVYQKNDSQ MTVNTGDNNSGNTGSTNNTPNGQNLLKTGDVGSNIYLIILGFVLLGGGITLLTLKKKKAHKFLLFLIMFTGASLLAGPIV QAVENSNLKPQETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTAPTPPVEQGTVTVNYQDEQGNSLAPSETLKGDVGE TYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVTYIYTKTPIPAANLTIEYLDENGNQIHEPKIISGNIGDPYDVTGDMDE LQIEGYTIDTNNLPTNAKGVLSNEPIQVKYIYIKNVKDVTLTIKFINRLTGGPFVLDDLTKIQNGDLVPLYPNLDQYHMQ LNYNNQLYNQGEAVPDIVIQGKEGDSYSLPERMIFSIVDDKGNVLPYVIGPPDEEGASYGIINWENIELVPDNIEGTLSA DNTVVTYSMDRYPIEIAPPTEDE
Sequences:
>Translated_503_residues MNKKLILSLFTATLLLLGFAFGGNTVNAAENNTSKITYNYVDFNTLTTTQKNSIIKGNPDEINKNDFENYSFVYQKNDSQ MTVNTGDNNSGNTGSTNNTPNGQNLLKTGDVGSNIYLIILGFVLLGGGITLLTLKKKKAHKFLLFLIMFTGASLLAGPIV QAVENSNLKPQETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTAPTPPVEQGTVTVNYQDEQGNSLAPSETLKGDVGE TYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVTYIYTKTPIPAANLTIEYLDENGNQIHEPKIISGNIGDPYDVTGDMDE LQIEGYTIDTNNLPTNAKGVLSNEPIQVKYIYIKNVKDVTLTIKFINRLTGGPFVLDDLTKIQNGDLVPLYPNLDQYHMQ LNYNNQLYNQGEAVPDIVIQGKEGDSYSLPERMIFSIVDDKGNVLPYVIGPPDEEGASYGIINWENIELVPDNIEGTLSA DNTVVTYSMDRYPIEIAPPTEDE >Mature_503_residues MNKKLILSLFTATLLLLGFAFGGNTVNAAENNTSKITYNYVDFNTLTTTQKNSIIKGNPDEINKNDFENYSFVYQKNDSQ MTVNTGDNNSGNTGSTNNTPNGQNLLKTGDVGSNIYLIILGFVLLGGGITLLTLKKKKAHKFLLFLIMFTGASLLAGPIV QAVENSNLKPQETTTVTKGTKETKKPGNIEGYTYVGYIHTSKNDTAPTPPVEQGTVTVNYQDEQGNSLAPSETLKGDVGE TYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVTYIYTKTPIPAANLTIEYLDENGNQIHEPKIISGNIGDPYDVTGDMDE LQIEGYTIDTNNLPTNAKGVLSNEPIQVKYIYIKNVKDVTLTIKFINRLTGGPFVLDDLTKIQNGDLVPLYPNLDQYHMQ LNYNNQLYNQGEAVPDIVIQGKEGDSYSLPERMIFSIVDDKGNVLPYVIGPPDEEGASYGIINWENIELVPDNIEGTLSA DNTVVTYSMDRYPIEIAPPTEDE
Specific function: Involved in several steps of L.monocytogenes infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009459 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF06458 MucBP [H]
EC number: NA
Molecular weight: Translated: 55297; Mature: 55297
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLILSLFTATLLLLGFAFGGNTVNAAENNTSKITYNYVDFNTLTTTQKNSIIKGNPD CCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEEEEEECCCCCEECCCCC EINKNDFENYSFVYQKNDSQMTVNTGDNNSGNTGSTNNTPNGQNLLKTGDVGSNIYLIIL CCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH GFVLLGGGITLLTLKKKKAHKFLLFLIMFTGASLLAGPIVQAVENSNLKPQETTTVTKGT HHHHHCCCEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCC KETKKPGNIEGYTYVGYIHTSKNDTAPTPPVEQGTVTVNYQDEQGNSLAPSETLKGDVGE CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCH TYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVTYIYTKTPIPAANLTIEYLDENGNQIHE HHHHHHHHCCCCCEEEECCCCCCCEEECEEEEEEEEECCCCCCCCCEEEEEECCCCEECC PKIISGNIGDPYDVTGDMDELQIEGYTIDTNNLPTNAKGVLSNEPIQVKYIYIKNVKDVT CEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCEEE LTIKFINRLTGGPFVLDDLTKIQNGDLVPLYPNLDQYHMQLNYNNQLYNQGEAVPDIVIQ EEEEEHHHCCCCCEEEHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEE GKEGDSYSLPERMIFSIVDDKGNVLPYVIGPPDEEGASYGIINWENIELVPDNIEGTLSA CCCCCCCCCCHHEEEEEECCCCCEEEEEECCCCCCCCEECEEEECCEEEECCCCCEEEEC DNTVVTYSMDRYPIEIAPPTEDE CCEEEEEECCCEEEEECCCCCCC >Mature Secondary Structure MNKKLILSLFTATLLLLGFAFGGNTVNAAENNTSKITYNYVDFNTLTTTQKNSIIKGNPD CCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEEEEEECCCCCEECCCCC EINKNDFENYSFVYQKNDSQMTVNTGDNNSGNTGSTNNTPNGQNLLKTGDVGSNIYLIIL CCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH GFVLLGGGITLLTLKKKKAHKFLLFLIMFTGASLLAGPIVQAVENSNLKPQETTTVTKGT HHHHHCCCEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCC KETKKPGNIEGYTYVGYIHTSKNDTAPTPPVEQGTVTVNYQDEQGNSLAPSETLKGDVGE CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCH TYKTVQKDVEGYDFKEVQGNATGEFTTKAQVVTYIYTKTPIPAANLTIEYLDENGNQIHE HHHHHHHHCCCCCEEEECCCCCCCEEECEEEEEEEEECCCCCCCCCEEEEEECCCCEECC PKIISGNIGDPYDVTGDMDELQIEGYTIDTNNLPTNAKGVLSNEPIQVKYIYIKNVKDVT CEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCEEE LTIKFINRLTGGPFVLDDLTKIQNGDLVPLYPNLDQYHMQLNYNNQLYNQGEAVPDIVIQ EEEEEHHHCCCCCEEEHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEE GKEGDSYSLPERMIFSIVDDKGNVLPYVIGPPDEEGASYGIINWENIELVPDNIEGTLSA CCCCCCCCCCHHEEEEEECCCCCEEEEEECCCCCCCCEECEEEECCEEEECCCCCEEEEC DNTVVTYSMDRYPIEIAPPTEDE CCEEEEEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA