Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871838

Identifier: 116871838

GI number: 116871838

Start: 434416

End: 435051

Strand: Direct

Name: 116871838

Synonym: lwe0418

Alternate gene names: NA

Gene position: 434416-435051 (Clockwise)

Preceding gene: 116871837

Following gene: 116871839

Centisome position: 15.44

GC content: 30.97

Gene sequence:

>636_bases
ATGAAATATATTGAATACTACGAGTACATGAAAAAAGACGCCATTATATATGCTTATCTACTTAATAATTTTTCTTATGT
ATCTAGAAAAGTAGAAACTTGGGAAAGCGTGACATTGGATCGCAAACATATTTTATTAGTGAAAAGCGGTGCGCTATTTG
AAGAGAATGATGGGAAGAAGAGTGGCATTGCGCGATGTTTCTTTCAAAAAAGCTTGTTTTTTCCAACAAGAAAATCTATT
CAACTCAAAGCTTTCGAGACATCAGAAATTTGTTGTATAAGTGCAGATGTAGTCTTTAGGAAACTAGAGGAAGACCAAAT
ATTATCTGATTTTTTCTTGCAAATCGCAGAAAAAAACGAACAAGATTTAAAAAGACAAGTATTTTTAGCAACTGAGAATC
CAAAAAACAAAATTGTTTCTACACTTAATTTTCTATTAGAAAACAATTTTTCAAATAATGATATGACTGCCTTTCCAGTA
TGGTTGCAGATGAACATTTTAGCAAAATTAGCAAATTGTTCTATTTCCACAATATCTTCTATTGTACATGAACTGCAAAA
CAAAGGAATGCTAGATATCCAATCCACTCCTTGGAAACTCTTAGGAAGGAATATGAAACTCGAATATTATGAATAA

Upstream 100 bases:

>100_bases
CTAAATTCACGTAAAATCGTTGTAAATGCACATACAAATTTATCGTCGTTTCTACGATAATTAAGTTTGTGGAAGAGTTT
TAGAAAGGATGATTAAGCAG

Downstream 100 bases:

>100_bases
AAAATCTCAAAAACAATTTGAGAAATTAGCAAGTTAAGCAGTAATTTTTATGGTACAAGTCTTGAAAAAACAAAATCAAG
TACTTTTCCAAGCACACACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKYIEYYEYMKKDAIIYAYLLNNFSYVSRKVETWESVTLDRKHILLVKSGALFEENDGKKSGIARCFFQKSLFFPTRKSI
QLKAFETSEICCISADVVFRKLEEDQILSDFFLQIAEKNEQDLKRQVFLATENPKNKIVSTLNFLLENNFSNNDMTAFPV
WLQMNILAKLANCSISTISSIVHELQNKGMLDIQSTPWKLLGRNMKLEYYE

Sequences:

>Translated_211_residues
MKYIEYYEYMKKDAIIYAYLLNNFSYVSRKVETWESVTLDRKHILLVKSGALFEENDGKKSGIARCFFQKSLFFPTRKSI
QLKAFETSEICCISADVVFRKLEEDQILSDFFLQIAEKNEQDLKRQVFLATENPKNKIVSTLNFLLENNFSNNDMTAFPV
WLQMNILAKLANCSISTISSIVHELQNKGMLDIQSTPWKLLGRNMKLEYYE
>Mature_211_residues
MKYIEYYEYMKKDAIIYAYLLNNFSYVSRKVETWESVTLDRKHILLVKSGALFEENDGKKSGIARCFFQKSLFFPTRKSI
QLKAFETSEICCISADVVFRKLEEDQILSDFFLQIAEKNEQDLKRQVFLATENPKNKIVSTLNFLLENNFSNNDMTAFPV
WLQMNILAKLANCSISTISSIVHELQNKGMLDIQSTPWKLLGRNMKLEYYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24696; Mature: 24696

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIEYYEYMKKDAIIYAYLLNNFSYVSRKVETWESVTLDRKHILLVKSGALFEENDGKK
CCHHHHHHHHHHCCEEEEHHHHCHHHHHHHHHHHHHHEECCEEEEEEECCCEEECCCCCH
SGIARCFFQKSLFFPTRKSIQLKAFETSEICCISADVVFRKLEEDQILSDFFLQIAEKNE
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHCCCH
QDLKRQVFLATENPKNKIVSTLNFLLENNFSNNDMTAFPVWLQMNILAKLANCSISTISS
HHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHH
IVHELQNKGMLDIQSTPWKLLGRNMKLEYYE
HHHHHHCCCEEEECCCCHHHHCCCCEEEECC
>Mature Secondary Structure
MKYIEYYEYMKKDAIIYAYLLNNFSYVSRKVETWESVTLDRKHILLVKSGALFEENDGKK
CCHHHHHHHHHHCCEEEEHHHHCHHHHHHHHHHHHHHEECCEEEEEEECCCEEECCCCCH
SGIARCFFQKSLFFPTRKSIQLKAFETSEICCISADVVFRKLEEDQILSDFFLQIAEKNE
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHCCCH
QDLKRQVFLATENPKNKIVSTLNFLLENNFSNNDMTAFPVWLQMNILAKLANCSISTISS
HHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHH
IVHELQNKGMLDIQSTPWKLLGRNMKLEYYE
HHHHHHCCCEEEECCCCHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA