| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871829
Identifier: 116871829
GI number: 116871829
Start: 425393
End: 426511
Strand: Direct
Name: 116871829
Synonym: lwe0409
Alternate gene names: NA
Gene position: 425393-426511 (Clockwise)
Preceding gene: 116871828
Following gene: 116871830
Centisome position: 15.12
GC content: 32.26
Gene sequence:
>1119_bases ATGTTGAATAGAGAACAAATAGAGATTGTCAGAGCCGAAGATGCACTCGAGTATGGAAGTGACATAGGAATCGATGGAGC GGACCAAATATATATTTACTATTTTAAAGACCCGGGAAAACTGTTAGAGCAAGATGTGGTTGATATTTGCGAAGCTTTTG GCGAATATATGATTTCTGCTTATTTTTTGAATGATGTGGATGGTCCTTATGAAAAATTGCAAGGAGACGAAAAAGGCGGA TATAAAAAAGTATTCTTGCATGGGGAATCGCAACAACTAAAACGAGAAATGTTTCGTTTGTTTATAGAAGGTGATTATAG TCCATATCTGAATAGGCTATTTTTATTTAAACAAAAAATAGAATTAGATTGTAGAAAACAAATCGAATTAGAAGATGGCA TGGCTATTATCGCCCCTATACTCGATGTTAGAGCGATAGGTATATTTTCAAAAGGGATAGATTTGGTGCGGCTTTTTCAA CAGATTACTAATACAGAATTACTGGATACTATACAAGAAACAGGAGCAAAATCTCGATTGATTGAGGATCATAATGAAAA TTTGAGAAATGAGATTGGGTACTTAGTTGACTATAAGACGGTATTACCAAAGCAAATTTTTAAAAAGCCGGAGTTATATG ATTTTTATTTTACCTATTTCTTTCATTGTTATGAGGATGACTTCATAAACGACTTAAATAAAATTGGACAACTGCTTAAG CAAGAAAGTGTCAAGTTGTTTACGCCACATTCTTATTATGAAACTATAAGAAAATTTATTTTTAAAAAGATAAAACAAAT AGATGTTCCATATGCTGAATTAAGTACAGGTATAACGGAAAAGGAATATGGTGAAATTTTATTGTGTAGAGAGAGAGAAA AAATGGATTTTACGGATTTTGATTATTTATACTGGTACTTTAATTCCGACTGTTTTATTTTTGGTGATAAAGAGAGTGAA ATTAGTATTTTGGCAATTAAAAAATCTCTTTCCATCAAAAATCCACTTGAAAATTGGAAAGAAGTAGAGTTGTTCGCGGC GAATCCAGGAGAAGAATGGTGTCCATGGCTAAAAGATGAGGAGAAATTTTTAGCAGAACTGATAGCTAATTATCAATAG
Upstream 100 bases:
>100_bases ATTTTTTACAATACGGATAGGCGATTTATTTTTATAAAAAACAGTGATCAATATTGAATGCTTTAGCTGATTGTCTATCT AAAAAAAGAAGGTGAACCAT
Downstream 100 bases:
>100_bases AGATGACAATAACAACCATTTTTTAGTATTAGAACAGTAGACGATAGCTTACTTATGGTAGGGGGGATTTAGTGGAATAT CAAATGTTAAAGAAATCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MLNREQIEIVRAEDALEYGSDIGIDGADQIYIYYFKDPGKLLEQDVVDICEAFGEYMISAYFLNDVDGPYEKLQGDEKGG YKKVFLHGESQQLKREMFRLFIEGDYSPYLNRLFLFKQKIELDCRKQIELEDGMAIIAPILDVRAIGIFSKGIDLVRLFQ QITNTELLDTIQETGAKSRLIEDHNENLRNEIGYLVDYKTVLPKQIFKKPELYDFYFTYFFHCYEDDFINDLNKIGQLLK QESVKLFTPHSYYETIRKFIFKKIKQIDVPYAELSTGITEKEYGEILLCREREKMDFTDFDYLYWYFNSDCFIFGDKESE ISILAIKKSLSIKNPLENWKEVELFAANPGEEWCPWLKDEEKFLAELIANYQ
Sequences:
>Translated_372_residues MLNREQIEIVRAEDALEYGSDIGIDGADQIYIYYFKDPGKLLEQDVVDICEAFGEYMISAYFLNDVDGPYEKLQGDEKGG YKKVFLHGESQQLKREMFRLFIEGDYSPYLNRLFLFKQKIELDCRKQIELEDGMAIIAPILDVRAIGIFSKGIDLVRLFQ QITNTELLDTIQETGAKSRLIEDHNENLRNEIGYLVDYKTVLPKQIFKKPELYDFYFTYFFHCYEDDFINDLNKIGQLLK QESVKLFTPHSYYETIRKFIFKKIKQIDVPYAELSTGITEKEYGEILLCREREKMDFTDFDYLYWYFNSDCFIFGDKESE ISILAIKKSLSIKNPLENWKEVELFAANPGEEWCPWLKDEEKFLAELIANYQ >Mature_372_residues MLNREQIEIVRAEDALEYGSDIGIDGADQIYIYYFKDPGKLLEQDVVDICEAFGEYMISAYFLNDVDGPYEKLQGDEKGG YKKVFLHGESQQLKREMFRLFIEGDYSPYLNRLFLFKQKIELDCRKQIELEDGMAIIAPILDVRAIGIFSKGIDLVRLFQ QITNTELLDTIQETGAKSRLIEDHNENLRNEIGYLVDYKTVLPKQIFKKPELYDFYFTYFFHCYEDDFINDLNKIGQLLK QESVKLFTPHSYYETIRKFIFKKIKQIDVPYAELSTGITEKEYGEILLCREREKMDFTDFDYLYWYFNSDCFIFGDKESE ISILAIKKSLSIKNPLENWKEVELFAANPGEEWCPWLKDEEKFLAELIANYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43952; Mature: 43952
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNREQIEIVRAEDALEYGSDIGIDGADQIYIYYFKDPGKLLEQDVVDICEAFGEYMISA CCCHHHEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH YFLNDVDGPYEKLQGDEKGGYKKVFLHGESQQLKREMFRLFIEGDYSPYLNRLFLFKQKI HHHCCCCCHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ELDCRKQIELEDGMAIIAPILDVRAIGIFSKGIDLVRLFQQITNTELLDTIQETGAKSRL CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCHHHHH IEDHNENLRNEIGYLVDYKTVLPKQIFKKPELYDFYFTYFFHCYEDDFINDLNKIGQLLK HHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QESVKLFTPHSYYETIRKFIFKKIKQIDVPYAELSTGITEKEYGEILLCREREKMDFTDF HCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHCCEEEEECCCCCCCCCC DYLYWYFNSDCFIFGDKESEISILAIKKSLSIKNPLENWKEVELFAANPGEEWCPWLKDE CEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCHHCCCCEEEEEECCCCHHCCCCCCCH EKFLAELIANYQ HHHHHHHHHCCC >Mature Secondary Structure MLNREQIEIVRAEDALEYGSDIGIDGADQIYIYYFKDPGKLLEQDVVDICEAFGEYMISA CCCHHHEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH YFLNDVDGPYEKLQGDEKGGYKKVFLHGESQQLKREMFRLFIEGDYSPYLNRLFLFKQKI HHHCCCCCHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ELDCRKQIELEDGMAIIAPILDVRAIGIFSKGIDLVRLFQQITNTELLDTIQETGAKSRL CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCHHHHH IEDHNENLRNEIGYLVDYKTVLPKQIFKKPELYDFYFTYFFHCYEDDFINDLNKIGQLLK HHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QESVKLFTPHSYYETIRKFIFKKIKQIDVPYAELSTGITEKEYGEILLCREREKMDFTDF HCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHCCEEEEECCCCCCCCCC DYLYWYFNSDCFIFGDKESEISILAIKKSLSIKNPLENWKEVELFAANPGEEWCPWLKDE CEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCHHCCCCEEEEEECCCCHHCCCCCCCH EKFLAELIANYQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA