| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is mngB [H]
Identifier: 116871785
GI number: 116871785
Start: 379932
End: 382559
Strand: Direct
Name: mngB [H]
Synonym: lwe0365
Alternate gene names: 116871785
Gene position: 379932-382559 (Clockwise)
Preceding gene: 116871784
Following gene: 116871786
Centisome position: 13.5
GC content: 37.33
Gene sequence:
>2628_bases ATGGCTAAAACGAAAGTACATGTAATTCCGCATTCACATTGGGATAGAGAATGGTATTTCACTTCAAGCCGTTCGACAAT CTATTTAGTGAAGCATTTAAAAGAAGTAATTGAAACTTTAGAAGCGAAAGAAGATTACCATTTTTACTTAATGGATGCTC AAAGTTCTTTAATAGAAGATTATTTGCGCTACTGCCCGGAAGATAAAACTAGATTAGAAAAACTTATTACTGATAAACGA CTTATTACAGGACCTTGGTATACACAAACGGACCAATTAGTCATTTCACAAGAGTCGATTGTTCGAAACTTACTATATGG GACGAGGATTGCATATGAAATGGGGCATAGCATGGCTGTAGGTTATGTCCCGGATGCATTCGGGCAAGGCGGAAATATGC CGCAAATTTATAAAGAATTTGGGATTTCGAAGTTTCTATTTTGGCGTGGAGTTGCCGATAATCGCTTGAAACAAACGGAA TTTATCTGGCGTGGCGATGACGGGACAGAAATGCTGGCTGAACAAATCCCGTTCGGCTACTACTATGGAGCCAATATTCC AGAAAATGAAGCAGAACTAAAAAAATACTTGGATGAACAAATTGGTGCTTTAGAAAAGAAAGCTTTGACGCCAAATGTCT ATTTTCCAAATGGGTTAGACCAAGCGCCAGTTAGAAAAAATTTACCAGAATTGGTTGCGAAATTTAATGAATTAGATAGC ACGCGTGAATACCAAATTGCTTCACCAGAAACATTTTTCGCTGATTTAGAACAAGATGTGATGGATTTACCGGTAATTGC TGGTGAATTGACAGAAGGAAAACATAGTCGCTTGCATAAATCGATTTTTTCCACACGAGCTGATTTAAAACAAGCAAACA ATGAAATTGAAAACTTTTTGAGCAATGTGTTAGAGCCAGTTCTTTCTGTAAGCTATTCACTTGGAAATCGCTATCCGCAT AACGAACTCGCAGAAATTTGGAAGTTAATGTTTGAAAATGCTGCGCACGATAGCATTGGTGGCTGTAATAGTGATACTAC TAATCGCGACGTCAAACATCGGTATAAATTGGCATCTGATTTAGCAACCAATTTACTCGATTTAAACATGCGCCTTATTA GTGAAAAAATCGAACAAAAACAAGCGTTCCAATTTACCATTTTCAACCCACTTCCATACGAAAAAAGTGGCGTTATCAAA ATGTCTGCTTATATTCCAGATGACAATTTCACGATGGAAGATACGCAAGGAAACACTCTTCCATATACTATTTTGGAGCA AACGGACTTAACAGAATATGTCTTAAACCAACATATCGATCTCAACCCAAGTAAAGCCGTTTATTTACCCAAAAAAGTCT TTTTAGCAACGATGCTTGTAGAAGTAAACAACCTCCCAGCGCTTGGATACGACACGGTTTACTTTAATTTGGAAAAAGAA ACTGCTGAGCAAGAACCAAAACAATCTACGGCTTCAAAAATCGAAAATGAATTTTATGAAATCCAGTTAGCGGACAACAA CTCACTAACTATTCATGACAAAAAAGCGAATAGAACTTATACAGATCAAATGGTTTTTGTTGAAAATGGAGACGATGGCG ATTCCTACAACTATTCTCCGCCTCGTAAAGACCTAGTAATTACATCTAAAGAAGCGGTAGTAGATAGTATGGATTCGAGT GTATCTAGCGTCAACCAAACATTAACTATTTCCTTCAAGTTAAATGTGCCGTATAATTTAGAAGAACGTGCTAATCGTGA AAAAAGAAAAGAAATGACTATCAAAACGATAATTTCTTTACGAAAAAACGAAGAACTTATTCGCTTTGATGTTCAAATCG CTAACAAAGTATTGAGTCATCGTTTATGTGTCACTTTCGCCACCGAAATTGCTAGCAAATTCTCGACAGCCGACCAATTA TTCGCGCCAATTAAACGTCCTGTTCGACTTCCAGAAATGGATGTATGGGAAGCGGAAGAATGGCAAGAAGCACCAATTTC AATTGAAGCAATGCAGAGTTTTGTCAGTTTACACGATGAAGTGCACGGGGTTGCTGTTATGACAGAAGGCGTGCGCGAAT ATGAAATCATTGGTGACAATTATGATACGATTTCGCTAACCTTATTCCGTACATTTAGCCATATGGGTAAAACAGATTTA CTGTATCGTCCTGGTCGTGCTTCCGGTGAGTCAATTGTTGCGACACCTGATGCGCAACTACTTGGCGAAATAAATGCGAC ATTCGCGCTCACTTTATTCGAAAGTTCTTTTGACGAAGCGAATATAGCAAAAAAAGCAAAAGAATACCTATCCAATCCAC CTGTTTATCAAATGTCTGATTTTCTTAACGGCCGGTTGATTTATGTTTATCGCGACGAAGAAAAAACATTAGATGCAACT TATAGCTTAAAACTTCCAATGTTAGATGGGGCGATTGTTAGTGCAGTGAAAAAAGCTGAAGATAGTGAGGCGTTTATTAC CCGCTTTTTCAATCCATACTTACAAAAAGAAATTGCTATTCCAGAAATTTTCCAAGGCAAAGAATGTCACTTGGACGAAA ATAAATCAAATGAGAAACAAACCACATTAAAACATGCAAAAGTCCAAACTTATTTATTTGAAAAATAA
Upstream 100 bases:
>100_bases CACCGAAGAAGAAACAGCTGCAGCAGACGATGCAGTGGATGATATTGATATTAGTTTTGACGAAATAGAGATTAAATAAT AGTTGGAGGATTTAATTAAA
Downstream 100 bases:
>100_bases TGGATAACTACCGTAAAAAGGAGCTGCTAAAATGGGATACTTCGCTTATAAACGTTTGGAAACATTATATGGCATGCTCC TTGATGCTGGTAGCCACTTA
Product: alpha-mannosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 875; Mature: 874
Protein sequence:
>875_residues MAKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKEDYHFYLMDAQSSLIEDYLRYCPEDKTRLEKLITDKR LITGPWYTQTDQLVISQESIVRNLLYGTRIAYEMGHSMAVGYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTE FIWRGDDGTEMLAEQIPFGYYYGANIPENEAELKKYLDEQIGALEKKALTPNVYFPNGLDQAPVRKNLPELVAKFNELDS TREYQIASPETFFADLEQDVMDLPVIAGELTEGKHSRLHKSIFSTRADLKQANNEIENFLSNVLEPVLSVSYSLGNRYPH NELAEIWKLMFENAAHDSIGGCNSDTTNRDVKHRYKLASDLATNLLDLNMRLISEKIEQKQAFQFTIFNPLPYEKSGVIK MSAYIPDDNFTMEDTQGNTLPYTILEQTDLTEYVLNQHIDLNPSKAVYLPKKVFLATMLVEVNNLPALGYDTVYFNLEKE TAEQEPKQSTASKIENEFYEIQLADNNSLTIHDKKANRTYTDQMVFVENGDDGDSYNYSPPRKDLVITSKEAVVDSMDSS VSSVNQTLTISFKLNVPYNLEERANREKRKEMTIKTIISLRKNEELIRFDVQIANKVLSHRLCVTFATEIASKFSTADQL FAPIKRPVRLPEMDVWEAEEWQEAPISIEAMQSFVSLHDEVHGVAVMTEGVREYEIIGDNYDTISLTLFRTFSHMGKTDL LYRPGRASGESIVATPDAQLLGEINATFALTLFESSFDEANIAKKAKEYLSNPPVYQMSDFLNGRLIYVYRDEEKTLDAT YSLKLPMLDGAIVSAVKKAEDSEAFITRFFNPYLQKEIAIPEIFQGKECHLDENKSNEKQTTLKHAKVQTYLFEK
Sequences:
>Translated_875_residues MAKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKEDYHFYLMDAQSSLIEDYLRYCPEDKTRLEKLITDKR LITGPWYTQTDQLVISQESIVRNLLYGTRIAYEMGHSMAVGYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTE FIWRGDDGTEMLAEQIPFGYYYGANIPENEAELKKYLDEQIGALEKKALTPNVYFPNGLDQAPVRKNLPELVAKFNELDS TREYQIASPETFFADLEQDVMDLPVIAGELTEGKHSRLHKSIFSTRADLKQANNEIENFLSNVLEPVLSVSYSLGNRYPH NELAEIWKLMFENAAHDSIGGCNSDTTNRDVKHRYKLASDLATNLLDLNMRLISEKIEQKQAFQFTIFNPLPYEKSGVIK MSAYIPDDNFTMEDTQGNTLPYTILEQTDLTEYVLNQHIDLNPSKAVYLPKKVFLATMLVEVNNLPALGYDTVYFNLEKE TAEQEPKQSTASKIENEFYEIQLADNNSLTIHDKKANRTYTDQMVFVENGDDGDSYNYSPPRKDLVITSKEAVVDSMDSS VSSVNQTLTISFKLNVPYNLEERANREKRKEMTIKTIISLRKNEELIRFDVQIANKVLSHRLCVTFATEIASKFSTADQL FAPIKRPVRLPEMDVWEAEEWQEAPISIEAMQSFVSLHDEVHGVAVMTEGVREYEIIGDNYDTISLTLFRTFSHMGKTDL LYRPGRASGESIVATPDAQLLGEINATFALTLFESSFDEANIAKKAKEYLSNPPVYQMSDFLNGRLIYVYRDEEKTLDAT YSLKLPMLDGAIVSAVKKAEDSEAFITRFFNPYLQKEIAIPEIFQGKECHLDENKSNEKQTTLKHAKVQTYLFEK >Mature_874_residues AKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKEDYHFYLMDAQSSLIEDYLRYCPEDKTRLEKLITDKRL ITGPWYTQTDQLVISQESIVRNLLYGTRIAYEMGHSMAVGYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTEF IWRGDDGTEMLAEQIPFGYYYGANIPENEAELKKYLDEQIGALEKKALTPNVYFPNGLDQAPVRKNLPELVAKFNELDST REYQIASPETFFADLEQDVMDLPVIAGELTEGKHSRLHKSIFSTRADLKQANNEIENFLSNVLEPVLSVSYSLGNRYPHN ELAEIWKLMFENAAHDSIGGCNSDTTNRDVKHRYKLASDLATNLLDLNMRLISEKIEQKQAFQFTIFNPLPYEKSGVIKM SAYIPDDNFTMEDTQGNTLPYTILEQTDLTEYVLNQHIDLNPSKAVYLPKKVFLATMLVEVNNLPALGYDTVYFNLEKET AEQEPKQSTASKIENEFYEIQLADNNSLTIHDKKANRTYTDQMVFVENGDDGDSYNYSPPRKDLVITSKEAVVDSMDSSV SSVNQTLTISFKLNVPYNLEERANREKRKEMTIKTIISLRKNEELIRFDVQIANKVLSHRLCVTFATEIASKFSTADQLF APIKRPVRLPEMDVWEAEEWQEAPISIEAMQSFVSLHDEVHGVAVMTEGVREYEIIGDNYDTISLTLFRTFSHMGKTDLL YRPGRASGESIVATPDAQLLGEINATFALTLFESSFDEANIAKKAKEYLSNPPVYQMSDFLNGRLIYVYRDEEKTLDATY SLKLPMLDGAIVSAVKKAEDSEAFITRFFNPYLQKEIAIPEIFQGKECHLDENKSNEKQTTLKHAKVQTYLFEK
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Homo sapiens, GI46852164, Length=343, Percent_Identity=25.0728862973761, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786952, Length=833, Percent_Identity=35.0540216086435, Blast_Score=564, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 100324; Mature: 100193
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKEDYHFYLMDAQSSLIED CCCCEEEEECCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH YLRYCPEDKTRLEKLITDKRLITGPWYTQTDQLVISQESIVRNLLYGTRIAYEMGHSMAV HHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCEEE GYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTEFIWRGDDGTEMLAEQIPFGY ECCCHHCCCCCCCHHHHHHHCCHHEEHHCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCE YYGANIPENEAELKKYLDEQIGALEKKALTPNVYFPNGLDQAPVRKNLPELVAKFNELDS EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCC TREYQIASPETFFADLEQDVMDLPVIAGELTEGKHSRLHKSIFSTRADLKQANNEIENFL CCCEEECCCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNVLEPVLSVSYSLGNRYPHNELAEIWKLMFENAAHDSIGGCNSDTTNRDVKHRYKLASD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH LATNLLDLNMRLISEKIEQKQAFQFTIFNPLPYEKSGVIKMSAYIPDDNFTMEDTQGNTL HHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCCCC PYTILEQTDLTEYVLNQHIDLNPSKAVYLPKKVFLATMLVEVNNLPALGYDTVYFNLEKE CEEEECCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHH TAEQEPKQSTASKIENEFYEIQLADNNSLTIHDKKANRTYTDQMVFVENGDDGDSYNYSP HHHCCHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCEECCEEEEEECCCCCCCCCCCC PRKDLVITSKEAVVDSMDSSVSSVNQTLTISFKLNVPYNLEERANREKRKEMTIKTIISL CCCCEEEECHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH RKNEELIRFDVQIANKVLSHRLCVTFATEIASKFSTADQLFAPIKRPVRLPEMDVWEAEE HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH WQEAPISIEAMQSFVSLHDEVHGVAVMTEGVREYEIIGDNYDTISLTLFRTFSHMGKTDL HHCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCEEEEHHHHHHHHCCCCCE LYRPGRASGESIVATPDAQLLGEINATFALTLFESSFDEANIAKKAKEYLSNPPVYQMSD EECCCCCCCCEEEECCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHH FLNGRLIYVYRDEEKTLDATYSLKLPMLDGAIVSAVKKAEDSEAFITRFFNPYLQKEIAI HCCCEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCC PEIFQGKECHLDENKSNEKQTTLKHAKVQTYLFEK CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKEDYHFYLMDAQSSLIED CCCEEEEECCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH YLRYCPEDKTRLEKLITDKRLITGPWYTQTDQLVISQESIVRNLLYGTRIAYEMGHSMAV HHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCEEE GYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTEFIWRGDDGTEMLAEQIPFGY ECCCHHCCCCCCCHHHHHHHCCHHEEHHCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCE YYGANIPENEAELKKYLDEQIGALEKKALTPNVYFPNGLDQAPVRKNLPELVAKFNELDS EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCC TREYQIASPETFFADLEQDVMDLPVIAGELTEGKHSRLHKSIFSTRADLKQANNEIENFL CCCEEECCCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNVLEPVLSVSYSLGNRYPHNELAEIWKLMFENAAHDSIGGCNSDTTNRDVKHRYKLASD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH LATNLLDLNMRLISEKIEQKQAFQFTIFNPLPYEKSGVIKMSAYIPDDNFTMEDTQGNTL HHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCCCC PYTILEQTDLTEYVLNQHIDLNPSKAVYLPKKVFLATMLVEVNNLPALGYDTVYFNLEKE CEEEECCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHH TAEQEPKQSTASKIENEFYEIQLADNNSLTIHDKKANRTYTDQMVFVENGDDGDSYNYSP HHHCCHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCEECCEEEEEECCCCCCCCCCCC PRKDLVITSKEAVVDSMDSSVSSVNQTLTISFKLNVPYNLEERANREKRKEMTIKTIISL CCCCEEEECHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH RKNEELIRFDVQIANKVLSHRLCVTFATEIASKFSTADQLFAPIKRPVRLPEMDVWEAEE HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH WQEAPISIEAMQSFVSLHDEVHGVAVMTEGVREYEIIGDNYDTISLTLFRTFSHMGKTDL HHCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCEEEEHHHHHHHHCCCCCE LYRPGRASGESIVATPDAQLLGEINATFALTLFESSFDEANIAKKAKEYLSNPPVYQMSD EECCCCCCCCEEEECCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHH FLNGRLIYVYRDEEKTLDATYSLKLPMLDGAIVSAVKKAEDSEAFITRFFNPYLQKEIAI HCCCEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCC PEIFQGKECHLDENKSNEKQTTLKHAKVQTYLFEK CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]