| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is fruA [H]
Identifier: 116871735
GI number: 116871735
Start: 340040
End: 341434
Strand: Direct
Name: fruA [H]
Synonym: lwe0315
Alternate gene names: 116871735
Gene position: 340040-341434 (Clockwise)
Preceding gene: 116871734
Following gene: 116871736
Centisome position: 12.08
GC content: 40.86
Gene sequence:
>1395_bases ATGAAAATAGTTGGTGTTACTGCTTGTCCCACTGGTATTGCTCATACGTATATGTCTGCCGAAAAATTAACAATAACGGC GGAAGCTCTTGGTTACGAAGTGAAAATCGAGACTCAAGGAGCAAAGGTAGAAAATGTTTTAACGAAAGAAGACATCGCTA CTGCTGATTATGTCATTTTAGCAGTGGATAAAGAAATAGATACTTCCAGATTCGCTGGAAAGAAAATTAAAAAAGTATCT ACTTCTAGAGCGATTAAAGAGGCTGATGTTGTTATCGATGAAACTATTTCAGGCAAAGGATTAATCAGTTTGGAAGCAAA AAGTGCAGATGTCAGTTCTGAACAACCATCAAAAGCGAGTTTGTATAATCATTTTATGAACGGTGTTAACTACATGTTGC CGTTTGTAATAGCTGGTGGGATTCTAATTGCTATTAGCTTTGCTTTTGGGATTGATGCTTCTAATCCTGATTCAGATTCC TATAACGCGTTAGCAGCTGCATTTTCTAAAATAGGTGGAGATACTGCTTTTGGTTTAATGGTCCCAGCACTTGCGGCCGG AATAGCGGTTTCTGTGGCTGGTCGAGCAGGATTTGCTCCAGGACTTGTTGCAGGGACGCTGGCGACTGTTGGTGGGTCAG GATTTCTTGGTGGGATGATTGGCGGTATTTTGGCTGGTTACGTAGCACATTTCTTTGCTAATAAAGTAAATGTAACGAAA TCACTTGCTTCGATTTATCAGTTAATTGTTGTACCTCTTTTAGGGATTACGATTGTTGGGTTGGCGATGGTGTTTATAAT TGATACACCAATTGCATGGGTATTAAATGCACTCACAGGTTGGTTAAACGGTCTTGGTGAAACATCAGGCGTAGTTTTTG GACTACTAATCGGTGTCATGATGGCAGCAGATATGGGTGGGCCTATTAATAAATCTATTTCAACCTTTTCCATTGGCTTG ATGTCAGCTGGTGTAACAGCGCCAATTGCAGCTTGTATGGCAGCTGGAATGGTTCCGCCACTTGGACTCGCACTTGCCAC TTTATTATTTAAAAACAAATTTACAAAAGAAGAAAGAACAGCTGGTAATTCTTGTTGGGTATTAGGTGCATCCTATATCA CAGAAGGAGCGATTCCTTTCGCAGTTGCCGATCCACTTCGAGTTATTCCAAGCTTGATGTTAGGTTCTGCAACAGCGGCC GCAATTTCGATGGGAGCAGGAGTTACTTCTATGGCGCCTCATGGTGGGATTTGGGTAATGTTCATCCCGAATGTTATTAA CCATCTATTTATCTATTTACTAGCAATTGCAGCAGGTACAGTCGTGACGGCAATTTCTGTCGGACTATTGAAAACCCCAT TAAACAAGCGAAAAAATAAAGAGGAGATGATATAA
Upstream 100 bases:
>100_bases TCCAGAAAGTTAATGGACGAAAAGTTTCGCGAAAAATTAAAAAATTCCAAAAACAAAAATGAAATTATAACAATTTTATC GAACTAAGGAGGCGTTTCAC
Downstream 100 bases:
>100_bases TGTTATATACAATGAAAGATCTTTTAGCAGTAGGAAAAGAACATCAATTTGCGGTACCAGCATTTAATATCTGTAGTTTT GATATGTTAAAGGCGATAAT
Product: PTS system; fructose-specific IIB component
Products: NA
Alternate protein names: EIIBBC-Fru; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVENVLTKEDIATADYVILAVDKEIDTSRFAGKKIKKVS TSRAIKEADVVIDETISGKGLISLEAKSADVSSEQPSKASLYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDS YNALAAAFSKIGGDTAFGLMVPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGGMIGGILAGYVAHFFANKVNVTK SLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLNALTGWLNGLGETSGVVFGLLIGVMMAADMGGPINKSISTFSIGL MSAGVTAPIAACMAAGMVPPLGLALATLLFKNKFTKEERTAGNSCWVLGASYITEGAIPFAVADPLRVIPSLMLGSATAA AISMGAGVTSMAPHGGIWVMFIPNVINHLFIYLLAIAAGTVVTAISVGLLKTPLNKRKNKEEMI
Sequences:
>Translated_464_residues MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVENVLTKEDIATADYVILAVDKEIDTSRFAGKKIKKVS TSRAIKEADVVIDETISGKGLISLEAKSADVSSEQPSKASLYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDS YNALAAAFSKIGGDTAFGLMVPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGGMIGGILAGYVAHFFANKVNVTK SLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLNALTGWLNGLGETSGVVFGLLIGVMMAADMGGPINKSISTFSIGL MSAGVTAPIAACMAAGMVPPLGLALATLLFKNKFTKEERTAGNSCWVLGASYITEGAIPFAVADPLRVIPSLMLGSATAA AISMGAGVTSMAPHGGIWVMFIPNVINHLFIYLLAIAAGTVVTAISVGLLKTPLNKRKNKEEMI >Mature_464_residues MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVENVLTKEDIATADYVILAVDKEIDTSRFAGKKIKKVS TSRAIKEADVVIDETISGKGLISLEAKSADVSSEQPSKASLYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDS YNALAAAFSKIGGDTAFGLMVPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGGMIGGILAGYVAHFFANKVNVTK SLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLNALTGWLNGLGETSGVVFGLLIGVMMAADMGGPINKSISTFSIGL MSAGVTAPIAACMAAGMVPPLGLALATLLFKNKFTKEERTAGNSCWVLGASYITEGAIPFAVADPLRVIPSLMLGSATAA AISMGAGVTSMAPHGGIWVMFIPNVINHLFIYLLAIAAGTVVTAISVGLLKTPLNKRKNKEEMI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=455, Percent_Identity=44.6153846153846, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1786951, Length=428, Percent_Identity=35.7476635514019, Blast_Score=248, Evalue=4e-67, Organism=Escherichia coli, GI87082348, Length=476, Percent_Identity=32.563025210084, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI1790386, Length=298, Percent_Identity=38.5906040268456, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1788729, Length=397, Percent_Identity=28.463476070529, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1790387, Length=93, Percent_Identity=55.9139784946236, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1788730, Length=96, Percent_Identity=44.7916666666667, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 47728; Mature: 47728
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVENVLTKEDIATADYVIL CEEEEEECCCCHHHHHHCCCCCEEEEHHHCCEEEEEECCCCHHHHHHHHHHCCCCCEEEE AVDKEIDTSRFAGKKIKKVSTSRAIKEADVVIDETISGKGLISLEAKSADVSSEQPSKAS EECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCCCCCHHH LYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDSYNALAAAFSKIGGDTAFGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH VPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGGMIGGILAGYVAHFFANKVNVTK HHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLNALTGWLNGLGETSGVVFGLLIGVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MAADMGGPINKSISTFSIGLMSAGVTAPIAACMAAGMVPPLGLALATLLFKNKFTKEERT HHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHC AGNSCWVLGASYITEGAIPFAVADPLRVIPSLMLGSATAAAISMGAGVTSMAPHGGIWVM CCCCEEEEEHHHHHCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEE FIPNVINHLFIYLLAIAAGTVVTAISVGLLKTPLNKRKNKEEMI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHCCC >Mature Secondary Structure MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVENVLTKEDIATADYVIL CEEEEEECCCCHHHHHHCCCCCEEEEHHHCCEEEEEECCCCHHHHHHHHHHCCCCCEEEE AVDKEIDTSRFAGKKIKKVSTSRAIKEADVVIDETISGKGLISLEAKSADVSSEQPSKAS EECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCCCCCHHH LYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDSYNALAAAFSKIGGDTAFGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH VPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGGMIGGILAGYVAHFFANKVNVTK HHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLNALTGWLNGLGETSGVVFGLLIGVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MAADMGGPINKSISTFSIGLMSAGVTAPIAACMAAGMVPPLGLALATLLFKNKFTKEERT HHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHC AGNSCWVLGASYITEGAIPFAVADPLRVIPSLMLGSATAAAISMGAGVTSMAPHGGIWVM CCCCEEEEEHHHHHCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEE FIPNVINHLFIYLLAIAAGTVVTAISVGLLKTPLNKRKNKEEMI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2254279 [H]