Click here to switch to the map view.

The map label for this gene is xylP [H]

Identifier: 116871662

GI number: 116871662

Start: 260183

End: 261571

Strand: Direct

Name: xylP [H]

Synonym: lwe0242

Alternate gene names: 116871662

Gene position: 260183-261571 (Clockwise)

Preceding gene: 116871661

Following gene: 116871663

Centisome position: 9.25

GC content: 38.52

Gene sequence:

>1389_bases
ATGGAAGCAACAGAACGTATAAAAGAAGCGGCGCCGTTAAAAGCAATGGTTCCTTGGAAAGAAAGAATTAGTTATGGCTT
AAGTGACACAGCATGTAATTTAGCATTTCAAGTTATCGGAACATATTTAATGTTTTTTTATACTGATGTTTATGGCATAA
GTGCGGCGGCGGTTGGGACACTATTTTTAGTCGCACGTGTGATTGATGCCTTTGACGGACCAATTATTGGGATTTTTATT
GACCGTACACATACAAAATGGGGAAAAAGTAGGCCGTTTTTCTTATGGTTTTCCATTCCGTTTGGCTTAATGTGTGTCTT
AACTTTTACAACCCCTGATTTAACGGACGGCGGAAAAATTGTTTGGGCTTATGTGACATATATTTTAGTTGGAATTTTCT
ATTCATGTGTAAATTTACCAATAACCTCTATTTTACCTAGTTTAACGAATAATCCAAAAGAACGGACTGTACTAGGCACC
ATTCGGCAATTTGGTGGCACGATAGGCCAAATCATCGTGACCGTTTTCACCTTGCCAATTGTGGCACTTTTAGGTTCAGG
GGATCAGCAAAAAGGATTTTTCTTAACCATTTTACTTTTCTCAATAGTAGCGGTTGTTCTACTTTTAAATACTTTCGTAA
ATACCAAAGAGCGTATCACAAATGTTCAAAAAGTGGTGCGAGTGAAGGATAGCGTAAAAGCAATGAAACGTAACTGGCCT
TGGATGATTATGATTTTAATGAACTTTATCTATTGGATGGCCATGACAATGAAAAATCAAACGACGGTTTATTTCTTTAA
GTATAATCTTGGCCGGGAAGATTTAGTGCCGATTATTATGGCTCTTGCATTTGGATCACTTCTCACTCTGCTCTTTACAC
CAGCAGTAGCGAATCGTATGGGTAAAAGAAATACAATGGTCATGGGCTTAGTGCTTGCGATTATTGGTCAAATTATTATG
GGCATTGGGGCGCATAACTTGAGCATTTCCATTATTATTTTTGGCGTTGTCATCAATGCGTTTGGAACTGGCTTTATCTC
TGGATTATTGTCTGTTATGTTAGCCGACACAGTAGATTACGGTGAATGGAAAAACGGAGTACGCGCTCAAGGACTACTAA
CTTCTGCTTCTAGTTTTGGGGCGAAATTTGGTATGGGTATCGGTGGTGCGATGACGGCTGGAATTTTGGCTATGGGCGGT
TATCAAGCAAACAAGACTCAAACTGCCGAGTCGCTTCGTGCTATTGAATTTAATTTCGTTTGGATTCCGATTATTGGCTT
TGTAATTGCAGCGATTGCTCTATTTTTCTATCGTGCAGATAAACAAGAAAAACAATATTTAGTAGAGTTAGAAGAACGAA
ATCGTACGTTTCGGGAAAATGAAAAATAA

Upstream 100 bases:

>100_bases
TCGGTTGTATGGCATAAGCAAGTCTCAGATGAGATCGAGCGTTTTGAGGGGACAAAAAATCTTCGTTTACAATAAAACTT
AAAAAAGTGAGGGTAATAAA

Downstream 100 bases:

>100_bases
AGGAGAGTATTATGACATATTTTAAACAAATTGAAAAAATAAATTATGAAGGTGTACAGTCAGGAAATCGGTTCGCCTTT
AGACATTACAATCCGGAAGA

Product: xylose-proton symporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MEATERIKEAAPLKAMVPWKERISYGLSDTACNLAFQVIGTYLMFFYTDVYGISAAAVGTLFLVARVIDAFDGPIIGIFI
DRTHTKWGKSRPFFLWFSIPFGLMCVLTFTTPDLTDGGKIVWAYVTYILVGIFYSCVNLPITSILPSLTNNPKERTVLGT
IRQFGGTIGQIIVTVFTLPIVALLGSGDQQKGFFLTILLFSIVAVVLLLNTFVNTKERITNVQKVVRVKDSVKAMKRNWP
WMIMILMNFIYWMAMTMKNQTTVYFFKYNLGREDLVPIIMALAFGSLLTLLFTPAVANRMGKRNTMVMGLVLAIIGQIIM
GIGAHNLSISIIIFGVVINAFGTGFISGLLSVMLADTVDYGEWKNGVRAQGLLTSASSFGAKFGMGIGGAMTAGILAMGG
YQANKTQTAESLRAIEFNFVWIPIIGFVIAAIALFFYRADKQEKQYLVELEERNRTFRENEK

Sequences:

>Translated_462_residues
MEATERIKEAAPLKAMVPWKERISYGLSDTACNLAFQVIGTYLMFFYTDVYGISAAAVGTLFLVARVIDAFDGPIIGIFI
DRTHTKWGKSRPFFLWFSIPFGLMCVLTFTTPDLTDGGKIVWAYVTYILVGIFYSCVNLPITSILPSLTNNPKERTVLGT
IRQFGGTIGQIIVTVFTLPIVALLGSGDQQKGFFLTILLFSIVAVVLLLNTFVNTKERITNVQKVVRVKDSVKAMKRNWP
WMIMILMNFIYWMAMTMKNQTTVYFFKYNLGREDLVPIIMALAFGSLLTLLFTPAVANRMGKRNTMVMGLVLAIIGQIIM
GIGAHNLSISIIIFGVVINAFGTGFISGLLSVMLADTVDYGEWKNGVRAQGLLTSASSFGAKFGMGIGGAMTAGILAMGG
YQANKTQTAESLRAIEFNFVWIPIIGFVIAAIALFFYRADKQEKQYLVELEERNRTFRENEK
>Mature_462_residues
MEATERIKEAAPLKAMVPWKERISYGLSDTACNLAFQVIGTYLMFFYTDVYGISAAAVGTLFLVARVIDAFDGPIIGIFI
DRTHTKWGKSRPFFLWFSIPFGLMCVLTFTTPDLTDGGKIVWAYVTYILVGIFYSCVNLPITSILPSLTNNPKERTVLGT
IRQFGGTIGQIIVTVFTLPIVALLGSGDQQKGFFLTILLFSIVAVVLLLNTFVNTKERITNVQKVVRVKDSVKAMKRNWP
WMIMILMNFIYWMAMTMKNQTTVYFFKYNLGREDLVPIIMALAFGSLLTLLFTPAVANRMGKRNTMVMGLVLAIIGQIIM
GIGAHNLSISIIIFGVVINAFGTGFISGLLSVMLADTVDYGEWKNGVRAQGLLTSASSFGAKFGMGIGGAMTAGILAMGG
YQANKTQTAESLRAIEFNFVWIPIIGFVIAAIALFFYRADKQEKQYLVELEERNRTFRENEK

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=425, Percent_Identity=36.4705882352941, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87082306, Length=445, Percent_Identity=31.9101123595506, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1787902, Length=451, Percent_Identity=28.8248337028825, Blast_Score=204, Evalue=9e-54,
Organism=Escherichia coli, GI145693206, Length=465, Percent_Identity=29.247311827957, Blast_Score=201, Evalue=6e-53,
Organism=Escherichia coli, GI48994989, Length=464, Percent_Identity=29.9568965517241, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1790561, Length=446, Percent_Identity=28.47533632287, Blast_Score=184, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51277; Mature: 51277

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEATERIKEAAPLKAMVPWKERISYGLSDTACNLAFQVIGTYLMFFYTDVYGISAAAVGT
CCHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLVARVIDAFDGPIIGIFIDRTHTKWGKSRPFFLWFSIPFGLMCVLTFTTPDLTDGGKI
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCHH
VWAYVTYILVGIFYSCVNLPITSILPSLTNNPKERTVLGTIRQFGGTIGQIIVTVFTLPI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VALLGSGDQQKGFFLTILLFSIVAVVLLLNTFVNTKERITNVQKVVRVKDSVKAMKRNWP
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
WMIMILMNFIYWMAMTMKNQTTVYFFKYNLGREDLVPIIMALAFGSLLTLLFTPAVANRM
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKRNTMVMGLVLAIIGQIIMGIGAHNLSISIIIFGVVINAFGTGFISGLLSVMLADTVDY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GEWKNGVRAQGLLTSASSFGAKFGMGIGGAMTAGILAMGGYQANKTQTAESLRAIEFNFV
HHHCCCCCHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEH
WIPIIGFVIAAIALFFYRADKQEKQYLVELEERNRTFRENEK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]