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The map label for this gene is 116871656

Identifier: 116871656

GI number: 116871656

Start: 252249

End: 252665

Strand: Direct

Name: 116871656

Synonym: lwe0236

Alternate gene names: NA

Gene position: 252249-252665 (Clockwise)

Preceding gene: 116871655

Following gene: 116871657

Centisome position: 8.96

GC content: 36.69

Gene sequence:

>417_bases
ATGGTAAGAAAAGAAGAACGGTTAGGAGTTTTACTTTGGTTTCGATTTAGTCGGTTTTATAATCGTAATATAAAGTTGAC
CAATCAAAACTTACGAGCAGCGGGGCTTTCAACAGCACAATTTGACTGCATTGCCCAAATAGGTTTGGACAACGAAATTA
CACAACAACAACTTGCCGAAAAATTAGTTGTGACAAAGGGAAATGTTACCCAACTCCTCGCGAAATTAGAGCAATTAGGT
TATATAACGCGAACAAAGACAGGACGCGAAAAACATATTGCACTCACAGATAAAGGCCAAGCGTGTTACCGCGAAAATGT
ACCAAAACAAGAAGCTTTTCAACAATCTCAATTTGATAAATTAACAAGAGACGAACAAAAAGAACTACTTAAGCTATTAA
AAAAACTAGGAGAGTGA

Upstream 100 bases:

>100_bases
TTTTGTGTCAAATTGGTTTTTTATTAGTTTCAATAAGTGAAAATACTTGCTTTTTAAACAGTTTAGTACTAAACTAAAAT
TATAAGAGGAGGCGACAACA

Downstream 100 bases:

>100_bases
TTATTTATGAAATTATCAGGAATTCATCACGTATCTATTTTTACAGCGAATGCACGAGCTAACTTTGACTTCTATACAAA
AATAATGGGACTGCGACTAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MVRKEERLGVLLWFRFSRFYNRNIKLTNQNLRAAGLSTAQFDCIAQIGLDNEITQQQLAEKLVVTKGNVTQLLAKLEQLG
YITRTKTGREKHIALTDKGQACYRENVPKQEAFQQSQFDKLTRDEQKELLKLLKKLGE

Sequences:

>Translated_138_residues
MVRKEERLGVLLWFRFSRFYNRNIKLTNQNLRAAGLSTAQFDCIAQIGLDNEITQQQLAEKLVVTKGNVTQLLAKLEQLG
YITRTKTGREKHIALTDKGQACYRENVPKQEAFQQSQFDKLTRDEQKELLKLLKKLGE
>Mature_138_residues
MVRKEERLGVLLWFRFSRFYNRNIKLTNQNLRAAGLSTAQFDCIAQIGLDNEITQQQLAEKLVVTKGNVTQLLAKLEQLG
YITRTKTGREKHIALTDKGQACYRENVPKQEAFQQSQFDKLTRDEQKELLKLLKKLGE

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15999; Mature: 15999

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRKEERLGVLLWFRFSRFYNRNIKLTNQNLRAAGLSTAQFDCIAQIGLDNEITQQQLAE
CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
KLVVTKGNVTQLLAKLEQLGYITRTKTGREKHIALTDKGQACYRENVPKQEAFQQSQFDK
HHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHH
LTRDEQKELLKLLKKLGE
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRKEERLGVLLWFRFSRFYNRNIKLTNQNLRAAGLSTAQFDCIAQIGLDNEITQQQLAE
CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
KLVVTKGNVTQLLAKLEQLGYITRTKTGREKHIALTDKGQACYRENVPKQEAFQQSQFDK
HHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHH
LTRDEQKELLKLLKKLGE
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA