| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is malF [H]
Identifier: 116871643
GI number: 116871643
Start: 230996
End: 232333
Strand: Direct
Name: malF [H]
Synonym: lwe0223
Alternate gene names: 116871643
Gene position: 230996-232333 (Clockwise)
Preceding gene: 116871642
Following gene: 116871644
Centisome position: 8.21
GC content: 34.08
Gene sequence:
>1338_bases ATGATGGTTAAGAAGAATTATTTTAATATTTTTAAGAATGGTTCTGTTTCTACGAGATTATCTTATGTAATTATGGGGGC TGGTAATTTGGCCCATAAGCAAATTGCGAAAGGACTCTTATTTCTTTTTAGCGAACTTGCTTTCTTGTTTTTCCTTGTGT TTTATGGTGTTAGTTTAATCCAAGGTATGACGACTCTTGGGACAGTGAATCAATCGTGGAATTATGATGATAACTTAGGG ATTATGGTTCGGACGCCAGGTGATAATTCCATGCTAATGCTGATATATGGAATTATGACAATTGTTATATGTGTTCTATT TGTTTTCTTGTATCTTGCTAATATTAGAAGTGCTAATCAAGTGGAAAAATTTCAACAGGAAAATAAAAAAATACCAACTT TTAAGGAAGATTTAAAGAGTTTATTAGATAATAAATTTCATGTAACGCTATTAACGATACCAATCATTGGCGTCATAGTT TTTACGATAATGCCACTTATTTACATGATTTCATTGGCTTTTACAAATTATGATCATGAGCACTTACCACCAAGAAATTT GTTTGGATGGGTAGGATTAGTTAATTTTAAAAATGTATTAAATGGCGACATTTCAAGTACATTTTTCCCTGTACTTGGTT GGACGCTGATTTGGGCACTTTTAGCAACTGCTACTTGTTTCTTTTTTGGTGTGTTGCTTGCACTGCTTATTAACCATAAG GGAGTCAAATTCAAGAAGTTTTGGCGAACTATTTTTGTTATAACAATGGCTGTGCCTCCTTTTGTATCGTTGTTAGTAAT GCAAAACTTGTTACATGCTGCTGGGCCGCTGAATACTATTTTAATGAATGCGGGAATTATCGCTGAGCCAATACCATTTT TGACAGATGCCTTACTTGCAAAAATATCTGTCATATTCGTTAATATGTGGATTGGAATTCCAGTGACTATGTTAATTGCC ACAGGGATTTTAATGAACTTGCCGAAAGATCAACTGGAAGCTGCGCGGATGGATGGGGGAAATAGTTTTCATTTATTCAG GTATATAACGTTCCCTCAAATATTAACGGTTATGTTACCAAGTTTGATTCAGCAATTTATTGGTAACATCAATAATTTTA ATGTGATATATCTCTTAACTGGTGGAGGGCCTTCAAATAGTAATTTCTACGGTGCTGGAGATACGGATTTGCTTGTAACG TGGCTTTATAAATTAACAGTAGAAGCTGCTGATTATAATTTAGCTTCTGTTATTGGGATTATCACATTCGTTCTTAGTGC GGCATTCTCATTGTTTGCTTATACACGTACAAATTCTTATAAAGAAGGGAGCAAATAA
Upstream 100 bases:
>100_bases ATACATATAAAGGTAAAATCAAGGAAGCGGATTATCCAGATGCACTTGATAAATTAGTCAAAGATATTACACCAGCGAAA TAAGAAAGTAGGTTAAGTAT
Downstream 100 bases:
>100_bases TATGAAAAAAGCTACGATATGGCCTAACTTGTTGTTGGTAGTACTTGGAGGTATTTGGATTTTTCCAATAATCTGGATTG TTTTAACGGCTTTTAGAGCG
Product: putative maltose/maltodextrin ABC transporter, permease protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFSELAFLFFLVFYGVSLIQGMTTLGTVNQSWNYDDNLG IMVRTPGDNSMLMLIYGIMTIVICVLFVFLYLANIRSANQVEKFQQENKKIPTFKEDLKSLLDNKFHVTLLTIPIIGVIV FTIMPLIYMISLAFTNYDHEHLPPRNLFGWVGLVNFKNVLNGDISSTFFPVLGWTLIWALLATATCFFFGVLLALLINHK GVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGPLNTILMNAGIIAEPIPFLTDALLAKISVIFVNMWIGIPVTMLIA TGILMNLPKDQLEAARMDGGNSFHLFRYITFPQILTVMLPSLIQQFIGNINNFNVIYLLTGGGPSNSNFYGAGDTDLLVT WLYKLTVEAADYNLASVIGIITFVLSAAFSLFAYTRTNSYKEGSK
Sequences:
>Translated_445_residues MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFSELAFLFFLVFYGVSLIQGMTTLGTVNQSWNYDDNLG IMVRTPGDNSMLMLIYGIMTIVICVLFVFLYLANIRSANQVEKFQQENKKIPTFKEDLKSLLDNKFHVTLLTIPIIGVIV FTIMPLIYMISLAFTNYDHEHLPPRNLFGWVGLVNFKNVLNGDISSTFFPVLGWTLIWALLATATCFFFGVLLALLINHK GVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGPLNTILMNAGIIAEPIPFLTDALLAKISVIFVNMWIGIPVTMLIA TGILMNLPKDQLEAARMDGGNSFHLFRYITFPQILTVMLPSLIQQFIGNINNFNVIYLLTGGGPSNSNFYGAGDTDLLVT WLYKLTVEAADYNLASVIGIITFVLSAAFSLFAYTRTNSYKEGSK >Mature_445_residues MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFSELAFLFFLVFYGVSLIQGMTTLGTVNQSWNYDDNLG IMVRTPGDNSMLMLIYGIMTIVICVLFVFLYLANIRSANQVEKFQQENKKIPTFKEDLKSLLDNKFHVTLLTIPIIGVIV FTIMPLIYMISLAFTNYDHEHLPPRNLFGWVGLVNFKNVLNGDISSTFFPVLGWTLIWALLATATCFFFGVLLALLINHK GVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGPLNTILMNAGIIAEPIPFLTDALLAKISVIFVNMWIGIPVTMLIA TGILMNLPKDQLEAARMDGGNSFHLFRYITFPQILTVMLPSLIQQFIGNINNFNVIYLLTGGGPSNSNFYGAGDTDLLVT WLYKLTVEAADYNLASVIGIITFVLSAAFSLFAYTRTNSYKEGSK
Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=262, Percent_Identity=31.2977099236641, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR007829 [H]
Pfam domain/function: PF00528 BPD_transp_1; PF05154 TM2 [H]
EC number: NA
Molecular weight: Translated: 49776; Mature: 49776
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFSELAFLFFLVFYGVSLI CCCCCCHHHHHCCCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGMTTLGTVNQSWNYDDNLGIMVRTPGDNSMLMLIYGIMTIVICVLFVFLYLANIRSANQ HHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VEKFQQENKKIPTFKEDLKSLLDNKFHVTLLTIPIIGVIVFTIMPLIYMISLAFTNYDHE HHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HLPPRNLFGWVGLVNFKNVLNGDISSTFFPVLGWTLIWALLATATCFFFGVLLALLINHK CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGPLNTILMNAGIIAEPIPFLTDALLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCHHHHHHHHHH KISVIFVNMWIGIPVTMLIATGILMNLPKDQLEAARMDGGNSFHLFRYITFPQILTVMLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH SLIQQFIGNINNFNVIYLLTGGGPSNSNFYGAGDTDLLVTWLYKLTVEAADYNLASVIGI HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ITFVLSAAFSLFAYTRTNSYKEGSK HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFSELAFLFFLVFYGVSLI CCCCCCHHHHHCCCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGMTTLGTVNQSWNYDDNLGIMVRTPGDNSMLMLIYGIMTIVICVLFVFLYLANIRSANQ HHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VEKFQQENKKIPTFKEDLKSLLDNKFHVTLLTIPIIGVIVFTIMPLIYMISLAFTNYDHE HHHHHHHCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HLPPRNLFGWVGLVNFKNVLNGDISSTFFPVLGWTLIWALLATATCFFFGVLLALLINHK CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGPLNTILMNAGIIAEPIPFLTDALLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCHHHHHHHHHH KISVIFVNMWIGIPVTMLIATGILMNLPKDQLEAARMDGGNSFHLFRYITFPQILTVMLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH SLIQQFIGNINNFNVIYLLTGGGPSNSNFYGAGDTDLLVTWLYKLTVEAADYNLASVIGI HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ITFVLSAAFSLFAYTRTNSYKEGSK HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]