| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is gltX [H]
Identifier: 116871620
GI number: 116871620
Start: 212941
End: 214416
Strand: Direct
Name: gltX [H]
Synonym: lwe0200
Alternate gene names: 116871620
Gene position: 212941-214416 (Clockwise)
Preceding gene: 116871619
Following gene: 116871621
Centisome position: 7.57
GC content: 37.4
Gene sequence:
>1476_bases GTGAGTGAAACAAAACGAGTACGTGTGCGTTATGCGCCGAGTCCAACTGGTTTTTTGCATATTGGAAATGCACGTACTGC CTTATTTAACTATTTATTTGCAAGACATAATGATGGAGACTTTATTATTCGGATTGAGGATACGGATGCGAAACGTAACG TAGCTGATGGCGAAGAAAGTCAAATGAAAAATTTGAAATGGCTAGGTATGGATTGGGATGAAGGTGTTGATGTTCCTGGA AAATATGGTCCTTATCGTCAATCTGAACGCCAATCTATTTACGAACCGCTTATTCAACAATTATTGGACGAAGGCTTGGC TTACAAATGTTATTGCACGGAAGAAGAATTAGAAGCAGAACGTGAAAAACAAAAAGCTAATAATGAAATGCCTCGTTATA GTGGTAAATGCCGTCATTTAACAAAAGAACAACAAGCTGAAAAAGAAGCGCAAGGTTTTAAACCAAGCATTCGTTTCAAA GTACCAGCTAATGAAACAATTACTTTTAACGATATGGTTAAAGATGATGTTTCTTTTGAATCAAATGGTATTGGTGATTT TGTTATTGCGAAAAAAGACGGAATCCCAACGTACAACTTTGCTGTAGCTGTGGATGATCATTTAATGGAAATTTCGCATG TTCTTCGCGGTGATGATCATATTTCAAATACACCAAAACAAATTTTGATATACAATGCTTTTGGTTGGGAGCCACCAACT TTCGGTCATATGACGCTCATTGTGAATGAAAGTAGACGAAAACTAAGTAAGCGTGACGGTTCGATTATTCAATTTATCGA ACAATATCGTGATTTAGGATATTTACCAGAAGCATTATTTAACTTCATTGCGATGCTTGGTTGGTCTCCTGAAGGGGAAG AAGAAATTTTCTCCAAAGAAGAATTTATTAAGATGTTTGATCCAAAACGTTTATCTAAATCACCAGCATTATTTGATAAT GTCAAATTGACTTGGGTAAATAACCAATATGTGAAAAAATTACCGCTAAATGATGTAGTGGAGCTTTCCTTACCACATTT ACAAAAAGCGGGGGTTGTGTCTGCTGATTTAGATCAAGCGGAACTTGACTGGGTGCACAAATTAGTTTCACTTTATCATG AACAAATGAGTTATGGTGCAGAGATTGTGCCACTTTCTGAGATGTTCTTTGCGGATGCAGAGGCGATTACTTTTGATGAA GAAGAAAAAGCTGTTCTTGCGGAAGATACAGTCCCAACTGTTATTTCGGCCTTCAAAAAAGAGTTAGAAGCACTAGAAGT TCTTGAAGCTGCGGAAGTAAAAGCGGCAATCAAGCGTGTCCAAAAAGAAACGGGAGTAAAAGGCAAAGGATTATTTATGC CAATTCGGATTGTGACTACTGGCGAAATGCATGGTCCTGAATTGCCGCTTGCAATCGAAGTTCTTGGTCGTGAAAAAGTG CTTAATCGTATGGATACATGGTTGAAAAATAATTAA
Upstream 100 bases:
>100_bases GAAGCTATTATAATATTAAATTAACGACTCCAGAAGATATGCCGCTTGCTAAGGCGATTTTAGGAGAACTTGGGGAAAAT TATTAAAGGAGTGAATAATT
Downstream 100 bases:
>100_bases TTTTGAATGGAAGCATCTCGGCAATTTGCGGGGTGCTTTTTTATTTTGATATATTTCAGTTGCAACGAATTTTATTGCTG TTATAATAGAACTAAATATA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKRNVADGEESQMKNLKWLGMDWDEGVDVPG KYGPYRQSERQSIYEPLIQQLLDEGLAYKCYCTEEELEAEREKQKANNEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFK VPANETITFNDMVKDDVSFESNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGDDHISNTPKQILIYNAFGWEPPT FGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLPEALFNFIAMLGWSPEGEEEIFSKEEFIKMFDPKRLSKSPALFDN VKLTWVNNQYVKKLPLNDVVELSLPHLQKAGVVSADLDQAELDWVHKLVSLYHEQMSYGAEIVPLSEMFFADAEAITFDE EEKAVLAEDTVPTVISAFKKELEALEVLEAAEVKAAIKRVQKETGVKGKGLFMPIRIVTTGEMHGPELPLAIEVLGREKV LNRMDTWLKNN
Sequences:
>Translated_491_residues MSETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKRNVADGEESQMKNLKWLGMDWDEGVDVPG KYGPYRQSERQSIYEPLIQQLLDEGLAYKCYCTEEELEAEREKQKANNEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFK VPANETITFNDMVKDDVSFESNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGDDHISNTPKQILIYNAFGWEPPT FGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLPEALFNFIAMLGWSPEGEEEIFSKEEFIKMFDPKRLSKSPALFDN VKLTWVNNQYVKKLPLNDVVELSLPHLQKAGVVSADLDQAELDWVHKLVSLYHEQMSYGAEIVPLSEMFFADAEAITFDE EEKAVLAEDTVPTVISAFKKELEALEVLEAAEVKAAIKRVQKETGVKGKGLFMPIRIVTTGEMHGPELPLAIEVLGREKV LNRMDTWLKNN >Mature_490_residues SETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKRNVADGEESQMKNLKWLGMDWDEGVDVPGK YGPYRQSERQSIYEPLIQQLLDEGLAYKCYCTEEELEAEREKQKANNEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFKV PANETITFNDMVKDDVSFESNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGDDHISNTPKQILIYNAFGWEPPTF GHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLPEALFNFIAMLGWSPEGEEEIFSKEEFIKMFDPKRLSKSPALFDNV KLTWVNNQYVKKLPLNDVVELSLPHLQKAGVVSADLDQAELDWVHKLVSLYHEQMSYGAEIVPLSEMFFADAEAITFDEE EKAVLAEDTVPTVISAFKKELEALEVLEAAEVKAAIKRVQKETGVKGKGLFMPIRIVTTGEMHGPELPLAIEVLGREKVL NRMDTWLKNN
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=336, Percent_Identity=40.7738095238095, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI4826960, Length=304, Percent_Identity=24.6710526315789, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI62241042, Length=259, Percent_Identity=24.3243243243243, Blast_Score=66, Evalue=1e-10, Organism=Escherichia coli, GI1788743, Length=483, Percent_Identity=37.888198757764, Blast_Score=347, Evalue=1e-96, Organism=Escherichia coli, GI226510925, Length=262, Percent_Identity=32.824427480916, Blast_Score=137, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71993394, Length=484, Percent_Identity=33.6776859504132, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17511007, Length=262, Percent_Identity=23.2824427480916, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324540, Length=507, Percent_Identity=33.7278106508876, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6324742, Length=311, Percent_Identity=24.1157556270096, Blast_Score=83, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6321192, Length=211, Percent_Identity=27.4881516587678, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24665321, Length=499, Percent_Identity=34.4689378757515, Blast_Score=285, Evalue=7e-77, Organism=Drosophila melanogaster, GI17864488, Length=300, Percent_Identity=25.3333333333333, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56052; Mature: 55921
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKRNVADGEES CCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCHH QMKNLKWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQQLLDEGLAYKCYCTEEELEAE HHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH REKQKANNEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFKVPANETITFNDMVKDDVSFE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHCCCCCC SNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGDDHISNTPKQILIYNAFGWEPPT CCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC FGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLPEALFNFIAMLGWSPEGEEEIFSKE CCCEEEEEECHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH EFIKMFDPKRLSKSPALFDNVKLTWVNNQYVKKLPLNDVVELSLPHLQKAGVVSADLDQA HHHHHCCCHHCCCCCCEECCEEEEEECCHHHHHCCCCHHHHCCCCCHHHCCCEECCCCHH ELDWVHKLVSLYHEQMSYGAEIVPLSEMFFADAEAITFDEEEKAVLAEDTVPTVISAFKK HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCEEEECCCCCCEEECCCHHHHHHHHHH ELEALEVLEAAEVKAAIKRVQKETGVKGKGLFMPIRIVTTGEMHGPELPLAIEVLGREKV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHHHH LNRMDTWLKNN HHHHHHHHCCC >Mature Secondary Structure SETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIRIEDTDAKRNVADGEES CCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCHH QMKNLKWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQQLLDEGLAYKCYCTEEELEAE HHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH REKQKANNEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFKVPANETITFNDMVKDDVSFE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHCCCCCC SNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGDDHISNTPKQILIYNAFGWEPPT CCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCC FGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLPEALFNFIAMLGWSPEGEEEIFSKE CCCEEEEEECHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH EFIKMFDPKRLSKSPALFDNVKLTWVNNQYVKKLPLNDVVELSLPHLQKAGVVSADLDQA HHHHHCCCHHCCCCCCEECCEEEEEECCHHHHHCCCCHHHHCCCCCHHHCCCEECCCCHH ELDWVHKLVSLYHEQMSYGAEIVPLSEMFFADAEAITFDEEEKAVLAEDTVPTVISAFKK HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCEEEECCCCCCEEECCCHHHHHHHHHH ELEALEVLEAAEVKAAIKRVQKETGVKGKGLFMPIRIVTTGEMHGPELPLAIEVLGREKV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHHHH LNRMDTWLKNN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]