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The map label for this gene is 116871618

Identifier: 116871618

GI number: 116871618

Start: 211141

End: 212214

Strand: Direct

Name: 116871618

Synonym: lwe0198

Alternate gene names: NA

Gene position: 211141-212214 (Clockwise)

Preceding gene: 116871617

Following gene: 116871619

Centisome position: 7.5

GC content: 36.41

Gene sequence:

>1074_bases
ATGCTTACATGGGTAATTCGAGTGTGTTTTTTAATTCTTGGTGGGACAACGGGAGTCTTTTCACTACCAGCACTTTGGGT
GAAGCTGGGAATTGGACACATTCTGCTAATTAATAATCCTTATACCGATGCTCTGATTGGTGCACTTATATTTTATCTTA
TTACTTTTTGGGCGGTGAAATATGTAGAAGCCGCACTTAATTGGTTAGAGGAAAAATTAGCTAAAATTGCTATTGGAACT
CTTATTTACGGAGGGCTAGGTTTATTTGTTGGATTAGTAATTGCGTTTTTTGCGAGCAATGCTTTAAGTCAAACAAATAT
TCCGCTTTTAAATTCAGTAGTACCAGTTATTTTAACACTAGTGCTGGGTTATTTAGGGTTCCGTATTGGGATCAGTCGTC
GAAGTGAATTTGGGAATTTTGTCAACAATAGAAATGCGAAGAAGAAAACCGCAGAAGAAGAACAAACCGAGGAGAAATCT
AAGAAAACCTATAAAATTTTGGATACGAGTGTTATTATTGATGGTCGTATTGCAGATATTTTAGCTACTGGATTTTTAGA
TGGAACGGTTGTCATTCCATTATTTGTGCTGGCTGAACTTCAGCATATCGCGGACTCATCAGACACGCTTAAACGAACAA
GAGGTCGACGCGGATTAGATATATTAAATCGGATTCAAAAAGAAGACTCTATTCAAGTGGAAATGTATGAAGGTGATTTT
GAGGATACACCAGAAGTTGATAGTAAACTGGTAAAACTTGCTAAAGTAATGGGCGGGATTGTCGTAACAAATGATTACAA
TTTAAACAAAGTATGTGAGTTCCAAAATGTACCAGTTTTAAACATTAATGATTTAGCTAATGCGGTAAAACCGGTTGTTT
TACCTGGTGAAAAAATGACTGTTCTTATGGTGAAAGATGGTAAAGAACATAATCAAGGTGTTGCATATTTAGATGATGGC
ACAATGATTGTTGTAGAAGATGGGCGCAAATTTATTAATGAGACCATTCAAGTCGAGGTAACTAGTGTGCTTCAAACATC
AGCAGGAAGAATGATTTTTGCTAAACCATCCTGA

Upstream 100 bases:

>100_bases
TTGCGGTATAGTCTTTTAATAGTGTAAAATAGTGCTATATGTATAGTTGGTAATAGTGCGATTATATATATGAATACAAG
AATGGAAAGGGGGAAACTAA

Downstream 100 bases:

>100_bases
ATAAAAGGAGTAAAAGGGCATGAATTATGAGCTGATTTTTTTAGCGGCAGGACAAGGTAAACGAATGAATGCGCAAAAAA
ATAAAATGTGGCTAGATCTA

Product: PIN/TRAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIGT
LIYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRSEFGNFVNNRNAKKKTAEEEQTEEKS
KKTYKILDTSVIIDGRIADILATGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDSIQVEMYEGDF
EDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDG
TMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS

Sequences:

>Translated_357_residues
MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIGT
LIYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRSEFGNFVNNRNAKKKTAEEEQTEEKS
KKTYKILDTSVIIDGRIADILATGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDSIQVEMYEGDF
EDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDG
TMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS
>Mature_357_residues
MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIGT
LIYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRSEFGNFVNNRNAKKKTAEEEQTEEKS
KKTYKILDTSVIIDGRIADILATGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDSIQVEMYEGDF
EDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDG
TMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 39367; Mature: 39367

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVK
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
YVEAALNWLEEKLAKIAIGTLIYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
VLGYLGFRIGISRRSEFGNFVNNRNAKKKTAEEEQTEEKSKKTYKILDTSVIIDGRIADI
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHH
LATGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDSIQVEMYEGDF
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCC
EDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMT
CCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCEEEHHHHHHHHCCEEECCCCEE
VLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS
EEEEECCCCCCCCEEEEECCCEEEECCCHHHHCHHHHEEHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVK
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
YVEAALNWLEEKLAKIAIGTLIYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
VLGYLGFRIGISRRSEFGNFVNNRNAKKKTAEEEQTEEKSKKTYKILDTSVIIDGRIADI
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHH
LATGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDSIQVEMYEGDF
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCC
EDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMT
CCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCEEEHHHHHHHHCCEEECCCCEE
VLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS
EEEEECCCCCCCCEEEEECCCEEEECCCHHHHCHHHHEEHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8885268; 11679669 [H]