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The map label for this gene is ybjY [C]

Identifier: 116871582

GI number: 116871582

Start: 161932

End: 162609

Strand: Direct

Name: ybjY [C]

Synonym: lwe0162

Alternate gene names: 116871582

Gene position: 161932-162609 (Clockwise)

Preceding gene: 116871581

Following gene: 116871583

Centisome position: 5.75

GC content: 35.1

Gene sequence:

>678_bases
ATGAAAAAATGGGTTAAATGGTTAATAGTTATCGTTATTCTCGCAGTAGTGGCCGTTGGTGCGGTTTTCTTACTGTCAAA
AAATAATGGCTCTGTAACAGAAGAGAAATTAGTTACAGCCAAAGTGAAACAAGGAGATATGAAAATCAATGCTACAGGAA
CAGGGGCTATTTCACCAGAAAATACGCAAGTTCCAGATTATGACAAACTTCAACTAGTAGCACAAATGGACGAACTTGAT
ATTCCAAATATTAAGAAGGACCAAGAAGTAAAAATTACAGTAACAGCACTTCCAGACAAAACTTACAAAGGAAAAGTAAA
AGAAATTGCAGAACAAGGCCAAGTACAAAACGGTGTATCTAGTTTTTCCGTAATCATTTCTATCGATAAAACAGATGATT
TAAAAGCCGGTATGACTGCTGATGCTTCTATTTTAGTGAAAGAGAAAAAAGACGCATTATATGTGCCGATTGAAGCTGTT
CAAAAAGACAGTGACGACAAATATTATGTATTAGTTCCGGAAGAAAAAGAAAATGGTAAAACGAAAAAAGTGAAGAAATT
TGTAGAAACTGGTCTTCATAATGAAGATAATATCGAAATCACTAAAGGCGTTAAGAAAGACCAAAAAGTAATCCTTCCTA
CACAAGAAACTTCCACGCTTCCAGGTGCTCCTAGCTAA

Upstream 100 bases:

>100_bases
CGATGTACTTCACTCACTTAACTTTTATGGTAGAATGGAACCTATCATTGTTACATAAAATACAGGGCTTCTAAACACTA
GGAGCAGAAGGAGAACATTC

Downstream 100 bases:

>100_bases
GTTTTTTGTAGATACGAATTAAATAAATTGTATGAAGGAGGGATAAACATGCCAAAACCGCTAATTGACATGAAAAATTT
AACAAAAACTTATACGCTAG

Product: putative secreted protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Efflux Transporter Rnd Family Mfp Subunit; Biotin/Lipoyl Attachment Domain-Containing Protein; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane Permease Cation Efflux Pumps; Efflux Transporter

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKKWVKWLIVIVILAVVAVGAVFLLSKNNGSVTEEKLVTAKVKQGDMKINATGTGAISPENTQVPDYDKLQLVAQMDELD
IPNIKKDQEVKITVTALPDKTYKGKVKEIAEQGQVQNGVSSFSVIISIDKTDDLKAGMTADASILVKEKKDALYVPIEAV
QKDSDDKYYVLVPEEKENGKTKKVKKFVETGLHNEDNIEITKGVKKDQKVILPTQETSTLPGAPS

Sequences:

>Translated_225_residues
MKKWVKWLIVIVILAVVAVGAVFLLSKNNGSVTEEKLVTAKVKQGDMKINATGTGAISPENTQVPDYDKLQLVAQMDELD
IPNIKKDQEVKITVTALPDKTYKGKVKEIAEQGQVQNGVSSFSVIISIDKTDDLKAGMTADASILVKEKKDALYVPIEAV
QKDSDDKYYVLVPEEKENGKTKKVKKFVETGLHNEDNIEITKGVKKDQKVILPTQETSTLPGAPS
>Mature_225_residues
MKKWVKWLIVIVILAVVAVGAVFLLSKNNGSVTEEKLVTAKVKQGDMKINATGTGAISPENTQVPDYDKLQLVAQMDELD
IPNIKKDQEVKITVTALPDKTYKGKVKEIAEQGQVQNGVSSFSVIISIDKTDDLKAGMTADASILVKEKKDALYVPIEAV
QKDSDDKYYVLVPEEKENGKTKKVKKFVETGLHNEDNIEITKGVKKDQKVILPTQETSTLPGAPS

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24667; Mature: 24667

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWVKWLIVIVILAVVAVGAVFLLSKNNGSVTEEKLVTAKVKQGDMKINATGTGAISPE
CHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCCCCCC
NTQVPDYDKLQLVAQMDELDIPNIKKDQEVKITVTALPDKTYKGKVKEIAEQGQVQNGVS
CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCHHHCCCC
SFSVIISIDKTDDLKAGMTADASILVKEKKDALYVPIEAVQKDSDDKYYVLVPEEKENGK
EEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHCCCCCCCEEEEECCCCCCCH
TKKVKKFVETGLHNEDNIEITKGVKKDQKVILPTQETSTLPGAPS
HHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKKWVKWLIVIVILAVVAVGAVFLLSKNNGSVTEEKLVTAKVKQGDMKINATGTGAISPE
CHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCCCCCC
NTQVPDYDKLQLVAQMDELDIPNIKKDQEVKITVTALPDKTYKGKVKEIAEQGQVQNGVS
CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCHHHCCCC
SFSVIISIDKTDDLKAGMTADASILVKEKKDALYVPIEAVQKDSDDKYYVLVPEEKENGK
EEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHCCCCCCCEEEEECCCCCCCH
TKKVKKFVETGLHNEDNIEITKGVKKDQKVILPTQETSTLPGAPS
HHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA