| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is cutC [C]
Identifier: 116871451
GI number: 116871451
Start: 29075
End: 29716
Strand: Direct
Name: cutC [C]
Synonym: lwe0029
Alternate gene names: 116871451
Gene position: 29075-29716 (Clockwise)
Preceding gene: 116871450
Following gene: 116871452
Centisome position: 1.03
GC content: 37.07
Gene sequence:
>642_bases ATGGTATTAAAAGAAGCATGTATTGAAAACACTACTAATTTAGCGAAAGTTATTTTAGCTGGGGCTAATCGAATTGAGCT TTGTGACAATCTGGCGGAAGGTGGGACTTCTGTTAGTTATGGGGTTGCGAAATATGTAGTGCACTTTTGTCATCAAAAAA ATGTGCGTGTTATGGCAATGGTTCGTCCTCGAAAAGGCGATTTTACTTACACAAAAGAGGAGATTGCAATGATGTGTGAG GATATTTTAATGTATAAGAAAGTAGGGATTGATGGAGTTGTTTTTGGTTGTATTACGAATTCAAAGCAGCTCGATAAACC AGCTATAAAACAATCAATGAAAGCTGCAACAGGTGTCGAAGTGACATTTCATATGGCATTTGATGAGTTAATAGAAACAG AGAAATTACAAGCAATAGACTGGTTGGCAACACAAGGTATTACACGAATTCTGACGCATGGTGGAGACGGGACCAAACTT CCCAAAGAAATATTTATGAATTGGCGAAAATATATTGATTATGCAGCCGATCGTATCATTATTTTGCCAGGTGGAGGGAT TAAATCTCATAATTTAGAATGGATTATAAAAGAAACTGGAGCGACTGAAATACATGGTACAGACTTGTTTGGGGAGCATT AA
Upstream 100 bases:
>100_bases ATTTTGCGATTGAAGATAAGTTTGCTGACCGGATTTTCCACTTATAATAAAAATGGGCGCGAAAATAATATTTATTTTCG CGCTTTTTGGAGGTTAGATG
Downstream 100 bases:
>100_bases AACTCCCCTAATAAAAAAATTTTTAAAAAAGGCTTGCAACCGTTTTCTTTATATGATATATTTATCTCATCACAAAGGAT TGTTACCAATTTATTGGGCA
Product: CutC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MVLKEACIENTTNLAKVILAGANRIELCDNLAEGGTSVSYGVAKYVVHFCHQKNVRVMAMVRPRKGDFTYTKEEIAMMCE DILMYKKVGIDGVVFGCITNSKQLDKPAIKQSMKAATGVEVTFHMAFDELIETEKLQAIDWLATQGITRILTHGGDGTKL PKEIFMNWRKYIDYAADRIIILPGGGIKSHNLEWIIKETGATEIHGTDLFGEH
Sequences:
>Translated_213_residues MVLKEACIENTTNLAKVILAGANRIELCDNLAEGGTSVSYGVAKYVVHFCHQKNVRVMAMVRPRKGDFTYTKEEIAMMCE DILMYKKVGIDGVVFGCITNSKQLDKPAIKQSMKAATGVEVTFHMAFDELIETEKLQAIDWLATQGITRILTHGGDGTKL PKEIFMNWRKYIDYAADRIIILPGGGIKSHNLEWIIKETGATEIHGTDLFGEH >Mature_213_residues MVLKEACIENTTNLAKVILAGANRIELCDNLAEGGTSVSYGVAKYVVHFCHQKNVRVMAMVRPRKGDFTYTKEEIAMMCE DILMYKKVGIDGVVFGCITNSKQLDKPAIKQSMKAATGVEVTFHMAFDELIETEKLQAIDWLATQGITRILTHGGDGTKL PKEIFMNWRKYIDYAADRIIILPGGGIKSHNLEWIIKETGATEIHGTDLFGEH
Specific function: Involved In Copper Homeostasis. [C]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=203, Percent_Identity=38.9162561576355, Blast_Score=141, Evalue=4e-34, Organism=Escherichia coli, GI87081995, Length=209, Percent_Identity=32.5358851674641, Blast_Score=100, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17556905, Length=205, Percent_Identity=28.780487804878, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI21355415, Length=212, Percent_Identity=31.1320754716981, Blast_Score=104, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 23724; Mature: 23724
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLKEACIENTTNLAKVILAGANRIELCDNLAEGGTSVSYGVAKYVVHFCHQKNVRVMAM CCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE VRPRKGDFTYTKEEIAMMCEDILMYKKVGIDGVVFGCITNSKQLDKPAIKQSMKAATGVE EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCE VTFHMAFDELIETEKLQAIDWLATQGITRILTHGGDGTKLPKEIFMNWRKYIDYAADRII EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEE ILPGGGIKSHNLEWIIKETGATEIHGTDLFGEH EECCCCCCCCCCEEEEEECCCCEECCCCCCCCC >Mature Secondary Structure MVLKEACIENTTNLAKVILAGANRIELCDNLAEGGTSVSYGVAKYVVHFCHQKNVRVMAM CCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE VRPRKGDFTYTKEEIAMMCEDILMYKKVGIDGVVFGCITNSKQLDKPAIKQSMKAATGVE EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCE VTFHMAFDELIETEKLQAIDWLATQGITRILTHGGDGTKLPKEIFMNWRKYIDYAADRII EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEE ILPGGGIKSHNLEWIIKETGATEIHGTDLFGEH EECCCCCCCCCCEEEEEECCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA