| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is fecA [H]
Identifier: 116696506
GI number: 116696506
Start: 2900814
End: 2902970
Strand: Direct
Name: fecA [H]
Synonym: H16_B2570
Alternate gene names: 116696506
Gene position: 2900814-2902970 (Clockwise)
Preceding gene: 116696503
Following gene: 116696509
Centisome position: 99.6
GC content: 65.65
Gene sequence:
>2157_bases TTGCAGCCCGCTTTCCGCCTTTCCGGGGGTGCCATCGGCGCCGCCCTGCTGTTCGCCCAGCTTGCCGCCCTGCCGGCCCA CGCCGCTGATCCCGCGCCTGCCGCCAACCCCGAAGCCACGCTGAACGCCGTCACCGTGGTCGGCAACTGGCTGGAGAACG CCAACGAGGCCAAGGTGCTGGAGCATCCCGGCGCGCGTACCATCGTCGACCGCGAGACCTTCCAGGAAGCCGGCGCCAAC AACGTGCGCGAGGTGCTGCGTCGCATCCCCGGCGTGCAGGTGCAGGAGAACAACGGCACCGGCGGCAGCGATGTCTCGCT CAACGTGGGCGTGCGCGGGCTGACCTCGCGCCTGTCGCCGCGCTCGACCATCCTGATGGACGGCGTGCCGCTGGCAGTGG CGCCCTACGGCCAGCCGCAGCTGTCGATGGCGCCGTTGTCGCTGGGCAACCTGGAAACCATCGACGTGGTGCGCGGCGCC GGCTCGGTGCGCTACGGCCCGCAGAACGTGGGCGGCATCATCAACTTCGTGACGCGCCCGATACCGAAGACCTTCGTGGC CGATGCGTCGGTGTCGACCGACATCTACAGCCACGGCGGCAGCGTCAAGACCAACCCGACCGCATTCATCGGCGGCACCA ACGACAACGGCCTGGGCGGCGCGCTGCTGTACTCGGGCATCCATGGCAACGGCTATCGCGAGAGCAACGACCACGTCAAT ATCGACGACCTGATGCTCAAGGGCACGTACCGGATCTCGAAGACCGATGAACTGAGCGCGGCCTTCCACTACTACGAGGG CAGGGCCGGCATGCCCGGCGGCCTGACTTCGGCCCAGTATGCGGCCGACCCGTTCCAGTCGGTGCGGCCCTACGACAATT TCGACGGCCGCCGCAGCGACTTCAGCCTGAAGTACAGCCACAACGACAATAACCGCAAGTTCGAGGTGCTGACGTACTAC ACCGACAGCTTCCGCGGCAGCAACATCGAGCAGCAAGGCACCGGCACGCAGGCCAACCTGCGCCGCCTGACCGCGGCCCC GCGCAATTACCACACGTTCGCGATCGAGCCACGCTACTCGCAGCTGTTCCGCGGCGAGAGCATGAGCCACGAGGTCAGCG TCGGCTACCGCTTCCTGCGCGAAGCCAGCGACGAAAAGGCATCGCGCACGCTGTTCTACACCCCGGGCACCATCGATCCG ACCACGCTGCGCTCGCCGGTGTACCAGTCGCGCACGGGCGGCACCACCGCCAATGCGGTCTATATCGACGACACCATCAA CGTCGGCAGCTGGACCATCACGCCGGGCCTGCGCTATGAGTTCATCCGATCGTATGTGACCGACAACTTCACCGGCGCTC GCAACGACGTCTCGTCCAACGAGCCGTTGCCGTCGCTGGCGGTGATGTACCACGTCAGCGACCAGTGGAAGCTGTTCGCC AACGCCGGCGTTTCGTTCGGCCCGCTGCAGTACTTCCAGATCGCGCAGACCACCAACGGCCTGACGCCCGAGAAGGCCAA GACGTATGAGGTCGGCACGCACTTCAACGCCAACGGCTGGGGCGGCGAGCTGACGCTGTTCAATATCGATTTCGACGACG AGCTGCAACTGCGCGGCGGCACCGGCGGCGCGCCGGACGCGTGGACCAACCTCGGCGCCACCACCCACCGTGGCGTGGAA TCGTCGCTGCGCTATGACTTCGGCGCGCTCGACAAGTCGCTGGCCGGCCTGTCGGCATACGCCACCTACACCTTCACCGA AGCCACCTACAACCAGGGCAACTTCGCCGGGCGCGACCTGCCGTTCTATTCGCGCCACGTGGCCACCGTAGGCATGCGCT ATGCGCGCAACCGCTGGGCACTCAATGTCGATGGCTTCGCGCAGTCGAAACAGCGTTCGCCGGGCGATCCGAGCACGTCG ACCAACTACCAGACGGCGGAAAGCGCAAACGGTGCGCTGGGCGATATCCCGGGTTATGCGCTGCTGAACATGCGGCTGGG CTATGACTTCGGCAAGTCGGCGCAGAATCTGAAGGTGGCGGTTGGGGTGAAGAACGTGTTCGACAAGCGCTATTTCACGC GCTCGACCGACAACAATGCGGGCAAGTATGTGGGGATGCCGCGGACGTTCTATATCCAGGCGTCACTGGCATATTGA
Upstream 100 bases:
>100_bases CTGAGAATCACTCGCATTTATAATCTCGGCCCATTGGCGCGGCCGCCCACGACGTCCCTCCCCTTGGCTTGCGGAACGCG CTGCTTCTCAGGAATCCATC
Downstream 100 bases:
>100_bases GGCGAAATCAGGCTGAGGGGGTGCTCCCCTCAGGTAGCAAAACGGCTCGCAGTTGCGAGCCGTTTTTGCTTTTGCAGCTT TAGTACGCGATCAAACGATC
Product: outer membrane receptor for Fe(III)-dicitrate
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MQPAFRLSGGAIGAALLFAQLAALPAHAADPAPAANPEATLNAVTVVGNWLENANEAKVLEHPGARTIVDRETFQEAGAN NVREVLRRIPGVQVQENNGTGGSDVSLNVGVRGLTSRLSPRSTILMDGVPLAVAPYGQPQLSMAPLSLGNLETIDVVRGA GSVRYGPQNVGGIINFVTRPIPKTFVADASVSTDIYSHGGSVKTNPTAFIGGTNDNGLGGALLYSGIHGNGYRESNDHVN IDDLMLKGTYRISKTDELSAAFHYYEGRAGMPGGLTSAQYAADPFQSVRPYDNFDGRRSDFSLKYSHNDNNRKFEVLTYY TDSFRGSNIEQQGTGTQANLRRLTAAPRNYHTFAIEPRYSQLFRGESMSHEVSVGYRFLREASDEKASRTLFYTPGTIDP TTLRSPVYQSRTGGTTANAVYIDDTINVGSWTITPGLRYEFIRSYVTDNFTGARNDVSSNEPLPSLAVMYHVSDQWKLFA NAGVSFGPLQYFQIAQTTNGLTPEKAKTYEVGTHFNANGWGGELTLFNIDFDDELQLRGGTGGAPDAWTNLGATTHRGVE SSLRYDFGALDKSLAGLSAYATYTFTEATYNQGNFAGRDLPFYSRHVATVGMRYARNRWALNVDGFAQSKQRSPGDPSTS TNYQTAESANGALGDIPGYALLNMRLGYDFGKSAQNLKVAVGVKNVFDKRYFTRSTDNNAGKYVGMPRTFYIQASLAY
Sequences:
>Translated_718_residues MQPAFRLSGGAIGAALLFAQLAALPAHAADPAPAANPEATLNAVTVVGNWLENANEAKVLEHPGARTIVDRETFQEAGAN NVREVLRRIPGVQVQENNGTGGSDVSLNVGVRGLTSRLSPRSTILMDGVPLAVAPYGQPQLSMAPLSLGNLETIDVVRGA GSVRYGPQNVGGIINFVTRPIPKTFVADASVSTDIYSHGGSVKTNPTAFIGGTNDNGLGGALLYSGIHGNGYRESNDHVN IDDLMLKGTYRISKTDELSAAFHYYEGRAGMPGGLTSAQYAADPFQSVRPYDNFDGRRSDFSLKYSHNDNNRKFEVLTYY TDSFRGSNIEQQGTGTQANLRRLTAAPRNYHTFAIEPRYSQLFRGESMSHEVSVGYRFLREASDEKASRTLFYTPGTIDP TTLRSPVYQSRTGGTTANAVYIDDTINVGSWTITPGLRYEFIRSYVTDNFTGARNDVSSNEPLPSLAVMYHVSDQWKLFA NAGVSFGPLQYFQIAQTTNGLTPEKAKTYEVGTHFNANGWGGELTLFNIDFDDELQLRGGTGGAPDAWTNLGATTHRGVE SSLRYDFGALDKSLAGLSAYATYTFTEATYNQGNFAGRDLPFYSRHVATVGMRYARNRWALNVDGFAQSKQRSPGDPSTS TNYQTAESANGALGDIPGYALLNMRLGYDFGKSAQNLKVAVGVKNVFDKRYFTRSTDNNAGKYVGMPRTFYIQASLAY >Mature_718_residues MQPAFRLSGGAIGAALLFAQLAALPAHAADPAPAANPEATLNAVTVVGNWLENANEAKVLEHPGARTIVDRETFQEAGAN NVREVLRRIPGVQVQENNGTGGSDVSLNVGVRGLTSRLSPRSTILMDGVPLAVAPYGQPQLSMAPLSLGNLETIDVVRGA GSVRYGPQNVGGIINFVTRPIPKTFVADASVSTDIYSHGGSVKTNPTAFIGGTNDNGLGGALLYSGIHGNGYRESNDHVN IDDLMLKGTYRISKTDELSAAFHYYEGRAGMPGGLTSAQYAADPFQSVRPYDNFDGRRSDFSLKYSHNDNNRKFEVLTYY TDSFRGSNIEQQGTGTQANLRRLTAAPRNYHTFAIEPRYSQLFRGESMSHEVSVGYRFLREASDEKASRTLFYTPGTIDP TTLRSPVYQSRTGGTTANAVYIDDTINVGSWTITPGLRYEFIRSYVTDNFTGARNDVSSNEPLPSLAVMYHVSDQWKLFA NAGVSFGPLQYFQIAQTTNGLTPEKAKTYEVGTHFNANGWGGELTLFNIDFDDELQLRGGTGGAPDAWTNLGATTHRGVE SSLRYDFGALDKSLAGLSAYATYTFTEATYNQGNFAGRDLPFYSRHVATVGMRYARNRWALNVDGFAQSKQRSPGDPSTS TNYQTAESANGALGDIPGYALLNMRLGYDFGKSAQNLKVAVGVKNVFDKRYFTRSTDNNAGKYVGMPRTFYIQASLAY
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=698, Percent_Identity=45.1289398280802, Blast_Score=567, Evalue=1e-163, Organism=Escherichia coli, GI1787723, Length=674, Percent_Identity=25.3709198813056, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI1788478, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77943; Mature: 77943
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPAFRLSGGAIGAALLFAQLAALPAHAADPAPAANPEATLNAVTVVGNWLENANEAKVL CCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCEEE EHPGARTIVDRETFQEAGANNVREVLRRIPGVQVQENNGTGGSDVSLNVGVRGLTSRLSP ECCCCCEEECHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCHHHHHCCCC RSTILMDGVPLAVAPYGQPQLSMAPLSLGNLETIDVVRGAGSVRYGPQNVGGIINFVTRP CCEEEECCCCEEEECCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC IPKTFVADASVSTDIYSHGGSVKTNPTAFIGGTNDNGLGGALLYSGIHGNGYRESNDHVN CCCHHEECCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCC IDDLMLKGTYRISKTDELSAAFHYYEGRAGMPGGLTSAQYAADPFQSVRPYDNFDGRRSD HHHEEEEEEEEECCCCHHHHHEEEECCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCC FSLKYSHNDNNRKFEVLTYYTDSFRGSNIEQQGTGTQANLRRLTAAPRNYHTFAIEPRYS EEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHH QLFRGESMSHEVSVGYRFLREASDEKASRTLFYTPGTIDPTTLRSPVYQSRTGGTTANAV HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCHHCCCCCCEEEEE YIDDTINVGSWTITPGLRYEFIRSYVTDNFTGARNDVSSNEPLPSLAVMYHVSDQWKLFA EEECCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE NAGVSFGPLQYFQIAQTTNGLTPEKAKTYEVGTHFNANGWGGELTLFNIDFDDELQLRGG CCCCCCCCHHEEEEEHHCCCCCCCCCCEEECCCEECCCCCCCEEEEEEECCCCCEEEECC TGGAPDAWTNLGATTHRGVESSLRYDFGALDKSLAGLSAYATYTFTEATYNQGNFAGRDL CCCCCHHHHCCCCCHHCCCHHHHHCCHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCC PFYSRHVATVGMRYARNRWALNVDGFAQSKQRSPGDPSTSTNYQTAESANGALGDIPGYA CHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEE LLNMRLGYDFGKSAQNLKVAVGVKNVFDKRYFTRSTDNNAGKYVGMPRTFYIQASLAY EEEEEECCCCCCCCCCEEEEEEHHHHHHHHHEECCCCCCCCEEECCCEEEEEEEEECC >Mature Secondary Structure MQPAFRLSGGAIGAALLFAQLAALPAHAADPAPAANPEATLNAVTVVGNWLENANEAKVL CCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCEEE EHPGARTIVDRETFQEAGANNVREVLRRIPGVQVQENNGTGGSDVSLNVGVRGLTSRLSP ECCCCCEEECHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCHHHHHCCCC RSTILMDGVPLAVAPYGQPQLSMAPLSLGNLETIDVVRGAGSVRYGPQNVGGIINFVTRP CCEEEECCCCEEEECCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC IPKTFVADASVSTDIYSHGGSVKTNPTAFIGGTNDNGLGGALLYSGIHGNGYRESNDHVN CCCHHEECCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCC IDDLMLKGTYRISKTDELSAAFHYYEGRAGMPGGLTSAQYAADPFQSVRPYDNFDGRRSD HHHEEEEEEEEECCCCHHHHHEEEECCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCC FSLKYSHNDNNRKFEVLTYYTDSFRGSNIEQQGTGTQANLRRLTAAPRNYHTFAIEPRYS EEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHH QLFRGESMSHEVSVGYRFLREASDEKASRTLFYTPGTIDPTTLRSPVYQSRTGGTTANAV HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCHHCCCCCCEEEEE YIDDTINVGSWTITPGLRYEFIRSYVTDNFTGARNDVSSNEPLPSLAVMYHVSDQWKLFA EEECCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE NAGVSFGPLQYFQIAQTTNGLTPEKAKTYEVGTHFNANGWGGELTLFNIDFDDELQLRGG CCCCCCCCHHEEEEEHHCCCCCCCCCCEEECCCEECCCCCCCEEEEEEECCCCCEEEECC TGGAPDAWTNLGATTHRGVESSLRYDFGALDKSLAGLSAYATYTFTEATYNQGNFAGRDL CCCCCHHHHCCCCCHHCCCHHHHHCCHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCC PFYSRHVATVGMRYARNRWALNVDGFAQSKQRSPGDPSTSTNYQTAESANGALGDIPGYA CHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEE LLNMRLGYDFGKSAQNLKVAVGVKNVFDKRYFTRSTDNNAGKYVGMPRTFYIQASLAY EEEEEECCCCCCCCCCEEEEEEHHHHHHHHHEECCCCCCCCEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]