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The map label for this gene is fliF [H]

Identifier: 116696304

GI number: 116696304

Start: 2679777

End: 2681507

Strand: Direct

Name: fliF [H]

Synonym: H16_B2368

Alternate gene names: 116696304

Gene position: 2679777-2681507 (Clockwise)

Preceding gene: 116696302

Following gene: 116696305

Centisome position: 92.01

GC content: 69.56

Gene sequence:

>1731_bases
ATGACCGCGACCGTGGCACTGCCCGGGCGCCCGGCAGAAGTGATCGAGCGCCTGAAGGCCAACCCGAAGCTGCCGCTGAT
GCTGGCCGGCGCCGCCCTGGCCGCGGCCATCGCGGTGGGCGTGCTGTGGTCGCGCAGCCCGGACTACAAGGTGCTGTACA
GCAACCTGTCCGAGCGCGATGGCGGCGCGGTGCTGCAGTCGCTGCAGCAGATGAACGTGCCGTACAAGTTCGCCGAAGGC
GGCGGCGCGGTCATGGTGCCGGCCGAGAAGGTGCATGAGACGCGCCTGCGCCTGGCATCGCAGGGCCTGCCCAAGAGCGG
CACGGCCGGCATGGAGCTGATGGACAACCAGAAATTCGGCATCAGCCAGTTTGCCGAGCAGGTCAACTACCAGCGCGGGC
TGGAAGGCGAGCTGGCGCGCTCGATCGAGTCCATCGCCGCGGTGCAGTCCGCCCGCGTGCACCTGGCCATCCCCAAGCCG
ACGCTGTTCGTGCGCGAGCGCCAGAAGCCGACCGCGTCGATCGTGCTGCAGCTTTACCCGGGCCGCGCCATCGATGAAGG
CCAGGTCGCTGCGATCAGCCACCTGGTGTCGTCGAGCGTGCCGGAGCTGACGCCCAAGTCGATCTCGATCGTCGACCAGC
ACGGCAACCTGCTGTCGAACACCGGCAACGAGCGCATGCTCGACGCGACCCAGCTCAAGTACGTCCAGGCGCTGGAGCAG
AACTACCTGAAGCGCATCGAAGCGATCCTGACGCCGATCGTCGGCAAGGACAACGTGCGCGCACAGGTGACCGCCGACGT
CGACTTCTCCATCGTCGAGCACACCGACGAGAGCTACAAGCCCAACCAGGACCCGACCCGCTCGGCGATCCGCAGCCAGC
AGACCAGCGAGTCGACCCAGCAGGGTGTCACGCCGCCGGGCGGCGTGCCCGGGGCGCTGTCGAACCAGCCGCCGGCTGCC
GCCGCCGCGCCCGTGACCACGCCGCAGACGCCGCGTGCGGGCCAGGCGCCGGGACAGGCCGGTGCTCCGGCTGCCGGGCA
ACCGGGACAGCCGGGGCAAGCTGCCCAGCCAGGTCAGGGCGCCCAGGTCGCCAATGCCACCGCTTCCAGCGGCCCCAGCA
GCAATCGCCGCGACTCCACCGTCAACTACGAACTGGACCGCTCCGTGCGCCACGTGCAGCAGGCACCGGGCGGCGTGCGC
CGCCTGTCGGTGGCGGTGGTGGTCAACTACCGTCAGCAGGCCGATGCCAAGGGCAAGCTCGTGGCCGAACCGCTGCCGCC
GGCACTGCTGGCGCAGATCCAGAACCTGACCAAGGAGGCGATGGGGTTCTCGGCCGACCGCGGCGACTCCATCAACGTGG
TCAACAGCCCATTCACCGCCGAGCGCGAGAAGGCCGCGCCCGAGGTGCCGCTGTGGAAGCAGCCCGACATGATCGAGCTC
GGCAAGACCCTTGCGGGCTACCTGCTGCTGGCACTGCTGGCGCTGTTCGTGTGGTTCAAGGTGGCGCGCCCGGTCCTGCG
CCGCTACACCTCGCCGCCGCTGCCGGCGCCGGAACCCAGGGACGAGACCGAGGCAGTGCTGCTGCCGCCGGACGAGCCCG
CCAACCCGGAAATCCTGCGGCTTGCCGCCAAGTATGAAAGCGACCTCGCGCTGGTGCGCGACGCCGCACAGCGCGACCCG
CGCCTGGTCGCCAGCGTGATCAAGAACTGGATTGCCAATGACAACCGCTAA

Upstream 100 bases:

>100_bases
AGCGTAATGTGAGCCGTGCCGTGAGCCGCGCCGACGACCAAGGCGGTCAGCATCGCCCGTGCCGTCGCCAGCATCGCGGC
GCCGGATCCGGAGCACGCGC

Downstream 100 bases:

>100_bases
GGGCATCTCCGAATCCGGCCTGCAAAAGAGCGCCGTCCTGATGATGGCGATCGGCGAGGATGCCGCGGCCGAGGTGTTCA
GGCACCTGTCGCAGCGCGAA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MTATVALPGRPAEVIERLKANPKLPLMLAGAALAAAIAVGVLWSRSPDYKVLYSNLSERDGGAVLQSLQQMNVPYKFAEG
GGAVMVPAEKVHETRLRLASQGLPKSGTAGMELMDNQKFGISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKP
TLFVRERQKPTASIVLQLYPGRAIDEGQVAAISHLVSSSVPELTPKSISIVDQHGNLLSNTGNERMLDATQLKYVQALEQ
NYLKRIEAILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTRSAIRSQQTSESTQQGVTPPGGVPGALSNQPPAA
AAAPVTTPQTPRAGQAPGQAGAPAAGQPGQPGQAAQPGQGAQVANATASSGPSSNRRDSTVNYELDRSVRHVQQAPGGVR
RLSVAVVVNYRQQADAKGKLVAEPLPPALLAQIQNLTKEAMGFSADRGDSINVVNSPFTAEREKAAPEVPLWKQPDMIEL
GKTLAGYLLLALLALFVWFKVARPVLRRYTSPPLPAPEPRDETEAVLLPPDEPANPEILRLAAKYESDLALVRDAAQRDP
RLVASVIKNWIANDNR

Sequences:

>Translated_576_residues
MTATVALPGRPAEVIERLKANPKLPLMLAGAALAAAIAVGVLWSRSPDYKVLYSNLSERDGGAVLQSLQQMNVPYKFAEG
GGAVMVPAEKVHETRLRLASQGLPKSGTAGMELMDNQKFGISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKP
TLFVRERQKPTASIVLQLYPGRAIDEGQVAAISHLVSSSVPELTPKSISIVDQHGNLLSNTGNERMLDATQLKYVQALEQ
NYLKRIEAILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTRSAIRSQQTSESTQQGVTPPGGVPGALSNQPPAA
AAAPVTTPQTPRAGQAPGQAGAPAAGQPGQPGQAAQPGQGAQVANATASSGPSSNRRDSTVNYELDRSVRHVQQAPGGVR
RLSVAVVVNYRQQADAKGKLVAEPLPPALLAQIQNLTKEAMGFSADRGDSINVVNSPFTAEREKAAPEVPLWKQPDMIEL
GKTLAGYLLLALLALFVWFKVARPVLRRYTSPPLPAPEPRDETEAVLLPPDEPANPEILRLAAKYESDLALVRDAAQRDP
RLVASVIKNWIANDNR
>Mature_575_residues
TATVALPGRPAEVIERLKANPKLPLMLAGAALAAAIAVGVLWSRSPDYKVLYSNLSERDGGAVLQSLQQMNVPYKFAEGG
GAVMVPAEKVHETRLRLASQGLPKSGTAGMELMDNQKFGISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKPT
LFVRERQKPTASIVLQLYPGRAIDEGQVAAISHLVSSSVPELTPKSISIVDQHGNLLSNTGNERMLDATQLKYVQALEQN
YLKRIEAILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTRSAIRSQQTSESTQQGVTPPGGVPGALSNQPPAAA
AAPVTTPQTPRAGQAPGQAGAPAAGQPGQPGQAAQPGQGAQVANATASSGPSSNRRDSTVNYELDRSVRHVQQAPGGVRR
LSVAVVVNYRQQADAKGKLVAEPLPPALLAQIQNLTKEAMGFSADRGDSINVVNSPFTAEREKAAPEVPLWKQPDMIELG
KTLAGYLLLALLALFVWFKVARPVLRRYTSPPLPAPEPRDETEAVLLPPDEPANPEILRLAAKYESDLALVRDAAQRDPR
LVASVIKNWIANDNR

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=588, Percent_Identity=48.6394557823129, Blast_Score=497, Evalue=1e-142,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61605; Mature: 61473

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATVALPGRPAEVIERLKANPKLPLMLAGAALAAAIAVGVLWSRSPDYKVLYSNLSERD
CCEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
GGAVLQSLQQMNVPYKFAEGGGAVMVPAEKVHETRLRLASQGLPKSGTAGMELMDNQKFG
HHHHHHHHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
ISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKPTLFVRERQKPTASIVLQLYP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCCCCEEEEEEECC
GRAIDEGQVAAISHLVSSSVPELTPKSISIVDQHGNLLSNTGNERMLDATQLKYVQALEQ
CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHH
NYLKRIEAILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTRSAIRSQQTSESTQ
HHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
QGVTPPGGVPGALSNQPPAAAAAPVTTPQTPRAGQAPGQAGAPAAGQPGQPGQAAQPGQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQVANATASSGPSSNRRDSTVNYELDRSVRHVQQAPGGVRRLSVAVVVNYRQQADAKGKL
CCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEEEEEECHHHCCCCCCE
VAEPLPPALLAQIQNLTKEAMGFSADRGDSINVVNSPFTAEREKAAPEVPLWKQPDMIEL
ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCHHHH
GKTLAGYLLLALLALFVWFKVARPVLRRYTSPPLPAPEPRDETEAVLLPPDEPANPEILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHH
LAAKYESDLALVRDAAQRDPRLVASVIKNWIANDNR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TATVALPGRPAEVIERLKANPKLPLMLAGAALAAAIAVGVLWSRSPDYKVLYSNLSERD
CEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
GGAVLQSLQQMNVPYKFAEGGGAVMVPAEKVHETRLRLASQGLPKSGTAGMELMDNQKFG
HHHHHHHHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
ISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKPTLFVRERQKPTASIVLQLYP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCCCCEEEEEEECC
GRAIDEGQVAAISHLVSSSVPELTPKSISIVDQHGNLLSNTGNERMLDATQLKYVQALEQ
CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHH
NYLKRIEAILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTRSAIRSQQTSESTQ
HHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
QGVTPPGGVPGALSNQPPAAAAAPVTTPQTPRAGQAPGQAGAPAAGQPGQPGQAAQPGQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQVANATASSGPSSNRRDSTVNYELDRSVRHVQQAPGGVRRLSVAVVVNYRQQADAKGKL
CCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEEEEEECHHHCCCCCCE
VAEPLPPALLAQIQNLTKEAMGFSADRGDSINVVNSPFTAEREKAAPEVPLWKQPDMIEL
ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCHHHH
GKTLAGYLLLALLALFVWFKVARPVLRRYTSPPLPAPEPRDETEAVLLPPDEPANPEILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHH
LAAKYESDLALVRDAAQRDPRLVASVIKNWIANDNR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]