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The map label for this gene is metQ [H]

Identifier: 116696168

GI number: 116696168

Start: 2531040

End: 2531861

Strand: Direct

Name: metQ [H]

Synonym: H16_B2232

Alternate gene names: 116696168

Gene position: 2531040-2531861 (Clockwise)

Preceding gene: 116696165

Following gene: 116696169

Centisome position: 86.9

GC content: 65.57

Gene sequence:

>822_bases
ATGCAATACGGGAAATTCGGCTTCGTCGCACGGCTGGCGGCAGCGGTGCTGGCACTGGGCGTGATGCAGGGTGCGGGCGC
GGCCGATCCGGACAAGAAGGAAATCCGCTTCGGCGCCACCGCCGGCCCCTACGCCGACCAGATCCGCTATGGCGTGAAGC
CGGTGCTGGAAAAGCGCGGCTACAAGGTCACCATCATTGAGTTCAGCGACTACGTGCAGCCCAACCTGGCGCTGGCCGAC
GGCGCCATCGACGCCAATGCGTTCCAGCACGTGGCCTACCTGAAGAAGTTCTCGGCCGACCGCAAGCTGGCGCTGACCGA
CGTGATCCAGGTGCCGACCGCGCCGATCGGCATCTACAGCCGCAAGCACAAGGGCCTGGCCGAGGTGAAGCCCGGCAATA
CCGTGTCGCTGCCGAACGATCCCACCAACCTGGCGCGCGCCATCGCCATCCTGCAGCAGATCGGCTGGGTCACGCTCAAG
CCGGGCACCGACCCGATCCGCGCCAGCGAGCGCGACATCGACGCCAACCCGCACAAGCTCAAGCTGATCCAGCTGGAAGC
CGCCCAGCTGCCGCGCTCGCTCGACGACGTGGACTATGCCTTCGTCAACGGCAACTATGCGCTGGCCTCCGGCCTGAAGC
TGACCTCGGCGCTGGCGCTGGAGAAGATTCCCGACTATTACATGAACCTGGTCGCGGTGAAGACGGCGGACCTGAACAAG
CCCTTCGTCAAGGACATCCGAGAGGCCTACGAGTCGGCGGAGTTCAAGGCCGTGACGCAGCAGCGCTTTGCGGGCTTCGT
GCAGCCGCCGTACCAGCGCTGA

Upstream 100 bases:

>100_bases
TGCGTAATAACTCGTTCGCCTATTGCCTGCCTTTCCATACAATGAGGCGACGCCGCGGCGGGACGCTGCCGGCCTCCAAC
AACATAACGGGGAGCATCAG

Downstream 100 bases:

>100_bases
GCCACCGCGCTCTCGCCAGCAAGAAAGCGCCGCCAGGCGCTTTCTTGCATTTGGGACAGCTGTCGCGCGCATTGTGCGCA
GCAAGACAATTTTGCGCCGC

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MQYGKFGFVARLAAAVLALGVMQGAGAADPDKKEIRFGATAGPYADQIRYGVKPVLEKRGYKVTIIEFSDYVQPNLALAD
GAIDANAFQHVAYLKKFSADRKLALTDVIQVPTAPIGIYSRKHKGLAEVKPGNTVSLPNDPTNLARAIAILQQIGWVTLK
PGTDPIRASERDIDANPHKLKLIQLEAAQLPRSLDDVDYAFVNGNYALASGLKLTSALALEKIPDYYMNLVAVKTADLNK
PFVKDIREAYESAEFKAVTQQRFAGFVQPPYQR

Sequences:

>Translated_273_residues
MQYGKFGFVARLAAAVLALGVMQGAGAADPDKKEIRFGATAGPYADQIRYGVKPVLEKRGYKVTIIEFSDYVQPNLALAD
GAIDANAFQHVAYLKKFSADRKLALTDVIQVPTAPIGIYSRKHKGLAEVKPGNTVSLPNDPTNLARAIAILQQIGWVTLK
PGTDPIRASERDIDANPHKLKLIQLEAAQLPRSLDDVDYAFVNGNYALASGLKLTSALALEKIPDYYMNLVAVKTADLNK
PFVKDIREAYESAEFKAVTQQRFAGFVQPPYQR
>Mature_273_residues
MQYGKFGFVARLAAAVLALGVMQGAGAADPDKKEIRFGATAGPYADQIRYGVKPVLEKRGYKVTIIEFSDYVQPNLALAD
GAIDANAFQHVAYLKKFSADRKLALTDVIQVPTAPIGIYSRKHKGLAEVKPGNTVSLPNDPTNLARAIAILQQIGWVTLK
PGTDPIRASERDIDANPHKLKLIQLEAAQLPRSLDDVDYAFVNGNYALASGLKLTSALALEKIPDYYMNLVAVKTADLNK
PFVKDIREAYESAEFKAVTQQRFAGFVQPPYQR

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=264, Percent_Identity=36.7424242424242, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1790093, Length=247, Percent_Identity=34.0080971659919, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29851; Mature: 29851

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYGKFGFVARLAAAVLALGVMQGAGAADPDKKEIRFGATAGPYADQIRYGVKPVLEKRG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHCCHHHHHHCC
YKVTIIEFSDYVQPNLALADGAIDANAFQHVAYLKKFSADRKLALTDVIQVPTAPIGIYS
CEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
RKHKGLAEVKPGNTVSLPNDPTNLARAIAILQQIGWVTLKPGTDPIRASERDIDANPHKL
CCCCCCCEECCCCEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCEE
KLIQLEAAQLPRSLDDVDYAFVNGNYALASGLKLTSALALEKIPDYYMNLVAVKTADLNK
EEEEEEHHHCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHEEEEEECCCCC
PFVKDIREAYESAEFKAVTQQRFAGFVQPPYQR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQYGKFGFVARLAAAVLALGVMQGAGAADPDKKEIRFGATAGPYADQIRYGVKPVLEKRG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHCCHHHHHHCC
YKVTIIEFSDYVQPNLALADGAIDANAFQHVAYLKKFSADRKLALTDVIQVPTAPIGIYS
CEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
RKHKGLAEVKPGNTVSLPNDPTNLARAIAILQQIGWVTLKPGTDPIRASERDIDANPHKL
CCCCCCCEECCCCEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCEE
KLIQLEAAQLPRSLDDVDYAFVNGNYALASGLKLTSALALEKIPDYYMNLVAVKTADLNK
EEEEEEHHHCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHEEEEEECCCCC
PFVKDIREAYESAEFKAVTQQRFAGFVQPPYQR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]