| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is 116696112
Identifier: 116696112
GI number: 116696112
Start: 2464036
End: 2466672
Strand: Direct
Name: 116696112
Synonym: H16_B2176
Alternate gene names: NA
Gene position: 2464036-2466672 (Clockwise)
Preceding gene: 116696110
Following gene: 116696113
Centisome position: 84.6
GC content: 71.56
Gene sequence:
>2637_bases ATGCTGACTTCGCTGCTGACACGCATTGTCCGGCTTGCCACTGCCTGGCCGTGGCGCGTCATCATCCTGGCGGCATTGCT GACCGCCGTCAGCGGCGTCTACGTGGCCCGCAACTTTGCGATCAACACCGACATCGGCCGCCTGCTGGAATCCGACGCCC CCTGGGCGGTGCGCGATGCCGCCATCGGCGACGCCTTTCCCCAGCGCAACCAGTTGATCCTGGCGGTGGTGCAGGCGCCC GCGACCGAGCTGGCCGATGCCGCCGCCGACGCGCTGGCCGAGGCGCTGCGCCGCCAGCCGGCACGCTTCACCGCGGTCAG CCAGCCCGGCGGCGGTGCGTTCTTCGCGCGCAACGGATTGCTGTTCGCCAGCACCGATGAAGTGCGCCAGCTCACGCAAC AGCTGATGCAGGCGCGCCCGCTCGTCAACGCGCTCGCGCATGACCCGACCCTGCGCGGCCTGTCCGATCTCCTCGCCACC ACGCTGGCGCTGCCGCTGCAGATGGGGCAGGTAAAGCTGGGCGACATGGCCAGGCTGCTGGGCAGCAGTGCACGGACACT AGACCAGGTGCTGGCCGGCAAGCCCGTCGCGCTGTCCTGGGCAGGGCTGCTCGACGACAGCCTCAAGCCCGGGCCCGATG GCCAGGTCTACAGCTACATCGCGCTCAGCCCCGTGCTGGACTACAGCGACCTGCAGGCCGGGGCCGCCGCCTCGCGCGCG ATCCGGCAGGCGGCGGCCGAGCTGCAGCTGGCGCAGCGCTACCAGGCCACGGTGCGGCTGACCGGCCCGCAGGCGCTGGC CGACGATGAATTCGCCTCGGTCAGCGACGGCGCCGTGCTCAACGGCGTGCTGACGGTGCTGGTGGTGGTGCTGATCCTGT GGCTGGCCTTGCGCTCGGCGCGGCTGATCGTTGCGGTGCTGGCCAGCCTGTTTGCCGGGCTGCTCATCACCGCCGCGCTG GGGCTGGCCATGGTTGGCGCGCTGAACATGATCTCGGTGGCGTTCGCGGTGCTGTTCGTCGGGCTGGGGGTGGACTTCGG CATCCAGTTCGGCGTGCGCTACCGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCG CGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGC GTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGAT CTGCGTGCTCAAGCCCGGCGGCGAGCCCGAGGCGCCGGGCTTCGCGTGGCTGGCGCCCGCGGACCGGTTCTTCGACCGCT ATCGCAAGCCGGTGCTGCTGGTCACCCTGCTCGCGATCCTGGCAGGCGCGCCGCTGCTGCCGCACCTGCGCTTTGACTTC GACCCGCTGCACCTGAAGGACCCCAGGTCCGAATCGATGGCCACGCTGCTGGCGCTCAAGGACGCGCCGCAGGCCGGCAC CGACGATGTCAGCGTGCTGGCGCCTTCGCTGCCGGCCGCGCGCGATCTGGCCGGCAAGCTGGCGGCGCTGCCCGAGGTGG CGCGCGCGGTCACGCTGCAGACTTTCATCCCCGCAGACCAGCCGCCCAAGCTGCAGGCCATCGGCCAGGCCTCGGCCGCG CTGATGCCGGCGCTGACGCAGCCCACCGCCACGCCCGCCACCGACAGCGCGCGCGTCAGTGCGCTGCGCAATGCCGCGCG GCAGCTGGCCATCGCCGCCGACGAGCATCCCGGTCCGGGCGCGGCCGAAGCCGCGCACCTGTCCGCCACGCTGAAGCAGC TGGCGGCCGCCGACGCCGCCACGCGCGACCGCGCCGAGCGCGCCATCGCCGTGCCGCTGCAGCTGGCGCTGGCACGGCTG AAGCTGGCGCTGGGCCCGCAACCCGTCAGCGAGCAGACGCTGCCGCCCGAACTGGTGCGCGACTGGATCACGCCGGACGG GCGCGCGCTGGTCAACGTCAGCCCGAAGCTGCCGCCGCCCGCCAGCGCACAGCGCGAGGCCGCGCTGGACCGCTTCATCA CCGCGGTGCAGCGCGTGGAGCCGACCGCCACCGGCGGGCCGATCGCGATCCGCGGCTCGGCCGATACCATCATGGCCGCC TTTGCGCAGGCCGGCATCTGGGCGGTGGTGTCAATCACCATCCTGCTATGGATCACGCTGCGCCGCTTCGGCGATGTGCT GCGCACGCTGATACCGCTGCTGGTTTCGGCCATCGTCACGCTGGAATTGTGCGTGCTGTTCGGCATTGCGCTGAACTTTG CCAACGTGATCGCGCTGCCGCTGCTGCTGGGCGTGGGCGTCGCGTTCAAGATCTACTACGTGATTGCCTGGCGGCACGGC AAGACCCAGCTGCTGCAGTCCAGCCTGACGCACGCCGTGCTGTACAGCGCGGCCACCACCGCCACCGCTTTCGGCAGCCT GTGGCTGTCGCAGCATCCCGGCACCGCCAGCATGGGCAAGCTGCTGGCGCTGGCACTGGCGTGCACGCTGGTCGGCGCGG TGTTCTTCCAGCCGATCCTGATGGGCCGCCCGCGCGAAGGCGCCCATCACAAACATGACAAGGCCGCCCGGTCATAA
Upstream 100 bases:
>100_bases AGCGGATCGGCCTGAATCGCGGATGCCCGGGCCGCGCATGCCGCATGCGCCACGCTGCCAGCCGATATACTCGCGGTTCG TGCTCCTTCCGGATCCGCCC
Downstream 100 bases:
>100_bases TCACAAACCCGATGCGGCCGACCCCGACCCCCTTCGTACAATGCCTTTACGCCAGCGCGCTACATCCGTTGCCACCACCG CCATTGCCGCCGCCCTGCTC
Product: transmembrane exporter protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MLTSLLTRIVRLATAWPWRVIILAALLTAVSGVYVARNFAINTDIGRLLESDAPWAVRDAAIGDAFPQRNQLILAVVQAP ATELADAAADALAEALRRQPARFTAVSQPGGGAFFARNGLLFASTDEVRQLTQQLMQARPLVNALAHDPTLRGLSDLLAT TLALPLQMGQVKLGDMARLLGSSARTLDQVLAGKPVALSWAGLLDDSLKPGPDGQVYSYIALSPVLDYSDLQAGAAASRA IRQAAAELQLAQRYQATVRLTGPQALADDEFASVSDGAVLNGVLTVLVVVLILWLALRSARLIVAVLASLFAGLLITAAL GLAMVGALNMISVAFAVLFVGLGVDFGIQFGVRYRAERHDRDHIVEALGLAARAVGAPLALAAAATAAAFFCFLPTDYRG VAELGLIAGVGMMVAFATTFTLLPALICVLKPGGEPEAPGFAWLAPADRFFDRYRKPVLLVTLLAILAGAPLLPHLRFDF DPLHLKDPRSESMATLLALKDAPQAGTDDVSVLAPSLPAARDLAGKLAALPEVARAVTLQTFIPADQPPKLQAIGQASAA LMPALTQPTATPATDSARVSALRNAARQLAIAADEHPGPGAAEAAHLSATLKQLAAADAATRDRAERAIAVPLQLALARL KLALGPQPVSEQTLPPELVRDWITPDGRALVNVSPKLPPPASAQREAALDRFITAVQRVEPTATGGPIAIRGSADTIMAA FAQAGIWAVVSITILLWITLRRFGDVLRTLIPLLVSAIVTLELCVLFGIALNFANVIALPLLLGVGVAFKIYYVIAWRHG KTQLLQSSLTHAVLYSAATTATAFGSLWLSQHPGTASMGKLLALALACTLVGAVFFQPILMGRPREGAHHKHDKAARS
Sequences:
>Translated_878_residues MLTSLLTRIVRLATAWPWRVIILAALLTAVSGVYVARNFAINTDIGRLLESDAPWAVRDAAIGDAFPQRNQLILAVVQAP ATELADAAADALAEALRRQPARFTAVSQPGGGAFFARNGLLFASTDEVRQLTQQLMQARPLVNALAHDPTLRGLSDLLAT TLALPLQMGQVKLGDMARLLGSSARTLDQVLAGKPVALSWAGLLDDSLKPGPDGQVYSYIALSPVLDYSDLQAGAAASRA IRQAAAELQLAQRYQATVRLTGPQALADDEFASVSDGAVLNGVLTVLVVVLILWLALRSARLIVAVLASLFAGLLITAAL GLAMVGALNMISVAFAVLFVGLGVDFGIQFGVRYRAERHDRDHIVEALGLAARAVGAPLALAAAATAAAFFCFLPTDYRG VAELGLIAGVGMMVAFATTFTLLPALICVLKPGGEPEAPGFAWLAPADRFFDRYRKPVLLVTLLAILAGAPLLPHLRFDF DPLHLKDPRSESMATLLALKDAPQAGTDDVSVLAPSLPAARDLAGKLAALPEVARAVTLQTFIPADQPPKLQAIGQASAA LMPALTQPTATPATDSARVSALRNAARQLAIAADEHPGPGAAEAAHLSATLKQLAAADAATRDRAERAIAVPLQLALARL KLALGPQPVSEQTLPPELVRDWITPDGRALVNVSPKLPPPASAQREAALDRFITAVQRVEPTATGGPIAIRGSADTIMAA FAQAGIWAVVSITILLWITLRRFGDVLRTLIPLLVSAIVTLELCVLFGIALNFANVIALPLLLGVGVAFKIYYVIAWRHG KTQLLQSSLTHAVLYSAATTATAFGSLWLSQHPGTASMGKLLALALACTLVGAVFFQPILMGRPREGAHHKHDKAARS >Mature_878_residues MLTSLLTRIVRLATAWPWRVIILAALLTAVSGVYVARNFAINTDIGRLLESDAPWAVRDAAIGDAFPQRNQLILAVVQAP ATELADAAADALAEALRRQPARFTAVSQPGGGAFFARNGLLFASTDEVRQLTQQLMQARPLVNALAHDPTLRGLSDLLAT TLALPLQMGQVKLGDMARLLGSSARTLDQVLAGKPVALSWAGLLDDSLKPGPDGQVYSYIALSPVLDYSDLQAGAAASRA IRQAAAELQLAQRYQATVRLTGPQALADDEFASVSDGAVLNGVLTVLVVVLILWLALRSARLIVAVLASLFAGLLITAAL GLAMVGALNMISVAFAVLFVGLGVDFGIQFGVRYRAERHDRDHIVEALGLAARAVGAPLALAAAATAAAFFCFLPTDYRG VAELGLIAGVGMMVAFATTFTLLPALICVLKPGGEPEAPGFAWLAPADRFFDRYRKPVLLVTLLAILAGAPLLPHLRFDF DPLHLKDPRSESMATLLALKDAPQAGTDDVSVLAPSLPAARDLAGKLAALPEVARAVTLQTFIPADQPPKLQAIGQASAA LMPALTQPTATPATDSARVSALRNAARQLAIAADEHPGPGAAEAAHLSATLKQLAAADAATRDRAERAIAVPLQLALARL KLALGPQPVSEQTLPPELVRDWITPDGRALVNVSPKLPPPASAQREAALDRFITAVQRVEPTATGGPIAIRGSADTIMAA FAQAGIWAVVSITILLWITLRRFGDVLRTLIPLLVSAIVTLELCVLFGIALNFANVIALPLLLGVGVAFKIYYVIAWRHG KTQLLQSSLTHAVLYSAATTATAFGSLWLSQHPGTASMGKLLALALACTLVGAVFFQPILMGRPREGAHHKHDKAARS
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92319; Mature: 92319
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSLLTRIVRLATAWPWRVIILAALLTAVSGVYVARNFAINTDIGRLLESDAPWAVRDA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHCCCCCCHHHHH AIGDAFPQRNQLILAVVQAPATELADAAADALAEALRRQPARFTAVSQPGGGAFFARNGL HHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCE LFASTDEVRQLTQQLMQARPLVNALAHDPTLRGLSDLLATTLALPLQMGQVKLGDMARLL EEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GSSARTLDQVLAGKPVALSWAGLLDDSLKPGPDGQVYSYIALSPVLDYSDLQAGAAASRA CCHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHH IRQAAAELQLAQRYQATVRLTGPQALADDEFASVSDGAVLNGVLTVLVVVLILWLALRSA HHHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLIVAVLASLFAGLLITAALGLAMVGALNMISVAFAVLFVGLGVDFGIQFGVRYRAERHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHCC RDHIVEALGLAARAVGAPLALAAAATAAAFFCFLPTDYRGVAELGLIAGVGMMVAFATTF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLLPALICVLKPGGEPEAPGFAWLAPADRFFDRYRKPVLLVTLLAILAGAPLLPHLRFDF HHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC DPLHLKDPRSESMATLLALKDAPQAGTDDVSVLAPSLPAARDLAGKLAALPEVARAVTLQ CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH TFIPADQPPKLQAIGQASAALMPALTQPTATPATDSARVSALRNAARQLAIAADEHPGPG HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC AAEAAHLSATLKQLAAADAATRDRAERAIAVPLQLALARLKLALGPQPVSEQTLPPELVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH DWITPDGRALVNVSPKLPPPASAQREAALDRFITAVQRVEPTATGGPIAIRGSADTIMAA HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHH FAQAGIWAVVSITILLWITLRRFGDVLRTLIPLLVSAIVTLELCVLFGIALNFANVIALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLGVGVAFKIYYVIAWRHGKTQLLQSSLTHAVLYSAATTATAFGSLWLSQHPGTASMGK HHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLALALACTLVGAVFFQPILMGRPREGAHHKHDKAARS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MLTSLLTRIVRLATAWPWRVIILAALLTAVSGVYVARNFAINTDIGRLLESDAPWAVRDA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHCCCCCCHHHHH AIGDAFPQRNQLILAVVQAPATELADAAADALAEALRRQPARFTAVSQPGGGAFFARNGL HHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCE LFASTDEVRQLTQQLMQARPLVNALAHDPTLRGLSDLLATTLALPLQMGQVKLGDMARLL EEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GSSARTLDQVLAGKPVALSWAGLLDDSLKPGPDGQVYSYIALSPVLDYSDLQAGAAASRA CCHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHH IRQAAAELQLAQRYQATVRLTGPQALADDEFASVSDGAVLNGVLTVLVVVLILWLALRSA HHHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLIVAVLASLFAGLLITAALGLAMVGALNMISVAFAVLFVGLGVDFGIQFGVRYRAERHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHCC RDHIVEALGLAARAVGAPLALAAAATAAAFFCFLPTDYRGVAELGLIAGVGMMVAFATTF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLLPALICVLKPGGEPEAPGFAWLAPADRFFDRYRKPVLLVTLLAILAGAPLLPHLRFDF HHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC DPLHLKDPRSESMATLLALKDAPQAGTDDVSVLAPSLPAARDLAGKLAALPEVARAVTLQ CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH TFIPADQPPKLQAIGQASAALMPALTQPTATPATDSARVSALRNAARQLAIAADEHPGPG HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC AAEAAHLSATLKQLAAADAATRDRAERAIAVPLQLALARLKLALGPQPVSEQTLPPELVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH DWITPDGRALVNVSPKLPPPASAQREAALDRFITAVQRVEPTATGGPIAIRGSADTIMAA HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHH FAQAGIWAVVSITILLWITLRRFGDVLRTLIPLLVSAIVTLELCVLFGIALNFANVIALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLGVGVAFKIYYVIAWRHGKTQLLQSSLTHAVLYSAATTATAFGSLWLSQHPGTASMGK HHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLALALACTLVGAVFFQPILMGRPREGAHHKHDKAARS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA