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The map label for this gene is ydjC [C]

Identifier: 116696109

GI number: 116696109

Start: 2461440

End: 2462192

Strand: Direct

Name: ydjC [C]

Synonym: H16_B2173

Alternate gene names: 116696109

Gene position: 2461440-2462192 (Clockwise)

Preceding gene: 116696108

Following gene: 116696110

Centisome position: 84.51

GC content: 74.5

Gene sequence:

>753_bases
GTGGAGCTGGCCCACCGCGACGGCGTGCTCAATGCCGCCAGCCTGATGGTGGGCGCGCCCGCCGTGGCGGATGCGGTCGA
GCGCGCGCGCCGGCTGCCGTCGTTGCGCGTGGGGCTGCACGTGGTGCTGGCCGACGGCCCGGCCACGCTGCCGCGCGCGC
GGATCCCCGACCTGGTCGACGCCGAAGCCCGCTTCGGCTCGGCCATGGCCCTGGACGGCTGCCGCTTCTTCTTCCTGCCG
CGCGTGCGCCGCCAGCTGGCGGCGGAGATCCGCGCGCAGTTCGAAGCCTTTGCCGCCACCGGCCTGCCGCTTGACCACGT
CAACACGCACAAGCATTTCCACCTGCACCCCACGGTGCTGTCGCTGATCCTGTCGATCGGGCGCGACTACGGCCTGCGCG
CGATGCGCCTGCCGCGCGAGCAGGGCGCGCCGTTGCCGCTGCGCCCCTGGCTGGCGCTGCTGCGCCGGCGCCTGGACCGC
GCCGGCATCGCGCACAATGACTACGTGGTCGGCATCGCGCGCAGCGGGCAGATGGACGAGGCAGCCCTGCTGCAGGCGCT
GGCGCAGTTGCCCGCGGGCGTGGGCGAGATCTACCTGCATCCGGCCGTGATCTCTGGCGAGGCCATTACCGCATCGATGC
GCGGCTACCGCCACGCCGACGAGCTGGCCGCGCTGCTGTCGCCGCGCGTGCGCGCCGCGCTGGAGCGCGCGGCCAACCGG
CGCGGCGGCTTTGCCGACGTGCTGGTGCCCTGA

Upstream 100 bases:

>100_bases
ACGAGGCCTGATCCTGGCCCACGCGCTTTCCTGTGCCTCGCAACGCGCGCTGATCGTCACCGCCGACGACTTCGGCCTGC
ACCCCGCCGTCAATGAGGCG

Downstream 100 bases:

>100_bases
TTGTTCAAGATGAAACGCATTGCTTACCTGACCGGCCTGATCGGGCTGCTGGCGCTCACCGCACTGGTGATCCACCAAGG
CGCCAGCGACATCGCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MELAHRDGVLNAASLMVGAPAVADAVERARRLPSLRVGLHVVLADGPATLPRARIPDLVDAEARFGSAMALDGCRFFFLP
RVRRQLAAEIRAQFEAFAATGLPLDHVNTHKHFHLHPTVLSLILSIGRDYGLRAMRLPREQGAPLPLRPWLALLRRRLDR
AGIAHNDYVVGIARSGQMDEAALLQALAQLPAGVGEIYLHPAVISGEAITASMRGYRHADELAALLSPRVRAALERAANR
RGGFADVLVP

Sequences:

>Translated_250_residues
MELAHRDGVLNAASLMVGAPAVADAVERARRLPSLRVGLHVVLADGPATLPRARIPDLVDAEARFGSAMALDGCRFFFLP
RVRRQLAAEIRAQFEAFAATGLPLDHVNTHKHFHLHPTVLSLILSIGRDYGLRAMRLPREQGAPLPLRPWLALLRRRLDR
AGIAHNDYVVGIARSGQMDEAALLQALAQLPAGVGEIYLHPAVISGEAITASMRGYRHADELAALLSPRVRAALERAANR
RGGFADVLVP
>Mature_250_residues
MELAHRDGVLNAASLMVGAPAVADAVERARRLPSLRVGLHVVLADGPATLPRARIPDLVDAEARFGSAMALDGCRFFFLP
RVRRQLAAEIRAQFEAFAATGLPLDHVNTHKHFHLHPTVLSLILSIGRDYGLRAMRLPREQGAPLPLRPWLALLRRRLDR
AGIAHNDYVVGIARSGQMDEAALLQALAQLPAGVGEIYLHPAVISGEAITASMRGYRHADELAALLSPRVRAALERAANR
RGGFADVLVP

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 27112; Mature: 27112

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAHRDGVLNAASLMVGAPAVADAVERARRLPSLRVGLHVVLADGPATLPRARIPDLVD
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEECEEEEEECCCCCCCCCCCCCHHC
AEARFGSAMALDGCRFFFLPRVRRQLAAEIRAQFEAFAATGLPLDHVNTHKHFHLHPTVL
HHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHH
SLILSIGRDYGLRAMRLPREQGAPLPLRPWLALLRRRLDRAGIAHNDYVVGIARSGQMDE
HHHHHHCCCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH
AALLQALAQLPAGVGEIYLHPAVISGEAITASMRGYRHADELAALLSPRVRAALERAANR
HHHHHHHHHCCCCCCCEEECCEEECCCHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHC
RGGFADVLVP
CCCCEECCCC
>Mature Secondary Structure
MELAHRDGVLNAASLMVGAPAVADAVERARRLPSLRVGLHVVLADGPATLPRARIPDLVD
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEECEEEEEECCCCCCCCCCCCCHHC
AEARFGSAMALDGCRFFFLPRVRRQLAAEIRAQFEAFAATGLPLDHVNTHKHFHLHPTVL
HHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHH
SLILSIGRDYGLRAMRLPREQGAPLPLRPWLALLRRRLDRAGIAHNDYVVGIARSGQMDE
HHHHHHCCCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH
AALLQALAQLPAGVGEIYLHPAVISGEAITASMRGYRHADELAALLSPRVRAALERAANR
HHHHHHHHHCCCCCCCEEECCEEECCCHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHC
RGGFADVLVP
CCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA