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The map label for this gene is amaB [H]

Identifier: 116696005

GI number: 116696005

Start: 2326238

End: 2327479

Strand: Direct

Name: amaB [H]

Synonym: H16_B2069

Alternate gene names: 116696005

Gene position: 2326238-2327479 (Clockwise)

Preceding gene: 116696004

Following gene: 116696008

Centisome position: 79.87

GC content: 68.76

Gene sequence:

>1242_bases
ATGAACGCAATCACGATCAATGGCGAACGCCTGTCGCAAGCGCTGATGGACCTGGCGCGGATCGGCGCCACGCCCAGGGG
CGGCAATGCGCGTCTGGCCCTGACCGCGCTGGACGGGCAGGCGCGCGACCTCGTCACCGGCTGGATGCGCGACGCCGGCC
TGGCGGTGCGCATCGACCGCGTGGGCAATATCTTCGGGCGCCGGGCGGGCCGCAACGACGCGCTTGCCCCGGTCATGACC
GGCAGCCATATCGACACCCAGCCCACCGGCGGCAAGTTCGACGGATGCTATGGCGTGATGGCCGGGCTGGAAGTCATGCG
CACGCTCAACCAGCACGGCGTGACCACCGAGGCGCCGCTGGAACTGGCGATCTGGACCAATGAGGAAGGCGCGCGCTTCG
TGCCGGTGATGATGGGATCGGGCGTGTTCGCCGGCGTTTTCCCCGAAGCCACCGCTTTGACGGCAACCGACAACGCCGGC
AAGTCCGTTGCCGGCGAACTCGCGGCGATCGACTATGCGGGCACCGCGCCGGTCGGCCACAAGGTTGGCGCGTACTTCGA
GGCGCATATCGAGCAAGGCCCGATCCTCGAGGCCGAGGACAAGGTCATCGGCGTGGTGACGGGGTCGCTTGGCCTGCGCT
GGTATGACGTCACGGTGACGGGCATGGAGGCGCATGCCGGCCCCACCCCCATGCCGCTGCGCCGGGACGCCCTGCATGGC
GCTTCGTTCCTGTTCCAGGAAGTGGCGAAGATCGCGGACGACTTTGCCCCCGATGGCCGGGGGACGGTCGGGGTGGTCAA
TGTCCACCCGTCTTCACGCAACGTCATTCCGGGGCGGGTACAGTTCAGCGTCGACCTTCGCCATCTCGATGGCGGCCAGC
TCGACCGGATGGAAGCAAGGCTGCGCGCAGCGTGCGCGGCGCTGGCCAGCGGCAGCACTACAGGTGCCGCGCTGGCGGTG
GAAGTCGAAGCGATCCAGCGCTTCGAGCCGACGCCCTTCGCGCCCGAGCTTGTGGCCCATGTCCGGCACGCGGCCGCGGC
GCGTGGCTACACGCATTGCGACATCGTCACCGGCGCTGGCCACGACGCGGTCTACCTGGCCAGGGTAGCGCCGGCGGCAA
TGATCTTCGTGCCGTGCAAGGACGGCATCAGCCATAACGAGATCGAGGACGCCAGGCCCGAGCATCTCGAGGCGGGCGCC
AATGTGCTGCTTGCCGCCATGCTGGCGCAAGCCCGGGGCTGA

Upstream 100 bases:

>100_bases
TGCCCACGCTGGTCGTGCAGGAAGGCGGCTACCACCTCGATTCGCTCGCCGCCAATGCAACGGCCTTCTTCGGCGGCATC
CAACAGTCAGGGACGGGCGT

Downstream 100 bases:

>100_bases
GCCCGCATGGGTCGGCCGGACAGGAAAGTGCGTGCGGCGTTACAGCTCGATCATGGCGAATTCGGCCTTGCCGACGTCGC
ATTCCGGGCAGCGCCAGTCC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNAITINGERLSQALMDLARIGATPRGGNARLALTALDGQARDLVTGWMRDAGLAVRIDRVGNIFGRRAGRNDALAPVMT
GSHIDTQPTGGKFDGCYGVMAGLEVMRTLNQHGVTTEAPLELAIWTNEEGARFVPVMMGSGVFAGVFPEATALTATDNAG
KSVAGELAAIDYAGTAPVGHKVGAYFEAHIEQGPILEAEDKVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALHG
ASFLFQEVAKIADDFAPDGRGTVGVVNVHPSSRNVIPGRVQFSVDLRHLDGGQLDRMEARLRAACAALASGSTTGAALAV
EVEAIQRFEPTPFAPELVAHVRHAAAARGYTHCDIVTGAGHDAVYLARVAPAAMIFVPCKDGISHNEIEDARPEHLEAGA
NVLLAAMLAQARG

Sequences:

>Translated_413_residues
MNAITINGERLSQALMDLARIGATPRGGNARLALTALDGQARDLVTGWMRDAGLAVRIDRVGNIFGRRAGRNDALAPVMT
GSHIDTQPTGGKFDGCYGVMAGLEVMRTLNQHGVTTEAPLELAIWTNEEGARFVPVMMGSGVFAGVFPEATALTATDNAG
KSVAGELAAIDYAGTAPVGHKVGAYFEAHIEQGPILEAEDKVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALHG
ASFLFQEVAKIADDFAPDGRGTVGVVNVHPSSRNVIPGRVQFSVDLRHLDGGQLDRMEARLRAACAALASGSTTGAALAV
EVEAIQRFEPTPFAPELVAHVRHAAAARGYTHCDIVTGAGHDAVYLARVAPAAMIFVPCKDGISHNEIEDARPEHLEAGA
NVLLAAMLAQARG
>Mature_413_residues
MNAITINGERLSQALMDLARIGATPRGGNARLALTALDGQARDLVTGWMRDAGLAVRIDRVGNIFGRRAGRNDALAPVMT
GSHIDTQPTGGKFDGCYGVMAGLEVMRTLNQHGVTTEAPLELAIWTNEEGARFVPVMMGSGVFAGVFPEATALTATDNAG
KSVAGELAAIDYAGTAPVGHKVGAYFEAHIEQGPILEAEDKVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALHG
ASFLFQEVAKIADDFAPDGRGTVGVVNVHPSSRNVIPGRVQFSVDLRHLDGGQLDRMEARLRAACAALASGSTTGAALAV
EVEAIQRFEPTPFAPELVAHVRHAAAARGYTHCDIVTGAGHDAVYLARVAPAAMIFVPCKDGISHNEIEDARPEHLEAGA
NVLLAAMLAQARG

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=418, Percent_Identity=33.0143540669856, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43301; Mature: 43301

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAITINGERLSQALMDLARIGATPRGGNARLALTALDGQARDLVTGWMRDAGLAVRIDR
CCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEH
VGNIFGRRAGRNDALAPVMTGSHIDTQPTGGKFDGCYGVMAGLEVMRTLNQHGVTTEAPL
HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
ELAIWTNEEGARFVPVMMGSGVFAGVFPEATALTATDNAGKSVAGELAAIDYAGTAPVGH
EEEEEECCCCCEEEEEEECCCEEEECCCCCEEEEECCCCCCHHHCCEEEEECCCCCCCCC
KVGAYFEAHIEQGPILEAEDKVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALHG
HHHHHHEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHH
ASFLFQEVAKIADDFAPDGRGTVGVVNVHPSSRNVIPGRVQFSVDLRHLDGGQLDRMEAR
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHH
LRAACAALASGSTTGAALAVEVEAIQRFEPTPFAPELVAHVRHAAAARGYTHCDIVTGAG
HHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
HDAVYLARVAPAAMIFVPCKDGISHNEIEDARPEHLEAGANVLLAAMLAQARG
CCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAITINGERLSQALMDLARIGATPRGGNARLALTALDGQARDLVTGWMRDAGLAVRIDR
CCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEH
VGNIFGRRAGRNDALAPVMTGSHIDTQPTGGKFDGCYGVMAGLEVMRTLNQHGVTTEAPL
HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
ELAIWTNEEGARFVPVMMGSGVFAGVFPEATALTATDNAGKSVAGELAAIDYAGTAPVGH
EEEEEECCCCCEEEEEEECCCEEEECCCCCEEEEECCCCCCHHHCCEEEEECCCCCCCCC
KVGAYFEAHIEQGPILEAEDKVIGVVTGSLGLRWYDVTVTGMEAHAGPTPMPLRRDALHG
HHHHHHEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHH
ASFLFQEVAKIADDFAPDGRGTVGVVNVHPSSRNVIPGRVQFSVDLRHLDGGQLDRMEAR
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHH
LRAACAALASGSTTGAALAVEVEAIQRFEPTPFAPELVAHVRHAAAARGYTHCDIVTGAG
HHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
HDAVYLARVAPAAMIFVPCKDGISHNEIEDARPEHLEAGANVLLAAMLAQARG
CCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]