| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695868
Identifier: 116695868
GI number: 116695868
Start: 2179070
End: 2180431
Strand: Direct
Name: 116695868
Synonym: H16_B1932
Alternate gene names: NA
Gene position: 2179070-2180431 (Clockwise)
Preceding gene: 116695866
Following gene: 116695870
Centisome position: 74.82
GC content: 67.11
Gene sequence:
>1362_bases ATGTCTCGTCATTTGCTGCTGGCCCCGGCGGCCATCGCACTGGGCTGCCTGGGCGCGGCGCAGGCGTGGGCGCAGGCCCC TGTCGCCTACCCCGCCAGGCTGGCAGGCCACGCGGTGCTGCCGGCCCAGACCCTGCTTGCCGTGCCGAAGGACGCGCCCG CTGACCTGCAGGTCAGCGGTAAGTTCACCACCGCGCAGCGCGTGGACACGCCGGGCACGGTCGAAGGCAAGTCCAATGGC CGCCCCACCGGCGTGTCGCTGCCGTTCCGCGGCCAGCCGGCACAGGGGCATTCCGGCATCAAGCGCATGGCCGACGGCAG CTTCTGGGTGCTGACCGACAACGGCGCCGGCGCCAAGGCCAACTCGCCGGACTTCATGCTGTACCTGAACCACTACAAGG TGGACTTCGGCAGCGGCCGCCTGCAGCGCCTGAAGACCATCTTCCTGCACGACCCGGACCAGAAGGTGCCGTTCCGCATC GTCCACGAGGGCACCAGGCAGCGCTACCTGACGGGGTCGGATTTCGATACGGAGAGCTTCCAGTTCGCCGACGGAGCGAT CTGGATCGGCGACGAGTTCGGCCCGTTCCTGATCAAGGCGGACCTGGACGGCAAGGTGCTGGCCGTGTTCGACACCAAGG TCGACGGCAAGGTGGTGCGCTCGCCCGACCATCCCGCCGTCACCGCGCCCGGTGCGCCAGACGGCAGCGTGAAGTTCCAG GTGCGGCGCTCCAAGGGCTTCGAGGGCATGGCGTCCTCGCCCGATGGCAGCAAGCTGTACGCGCTGCTGGAAGGCGCGCT GTGGGACGAGGCCGCCAAGGGCTACGAGAACGAAGGCGGCAAGCCCTACCTGCGCGTGCTGGAGTTTGATGTCAGGCAGC AGGCCTGGACCGGCCGCCACTGGAAGTACGTACTGGAAGGCGCCAGCCACGCCATCGGCGACTTCAACATGTTCAATGCC ACCACCGGCCTTATCATCGAGCGCGACAACGGCGAAGGCACGCCGGACAAGGCCTGTCCGGCCGGGCAGAAGCGCCCGGA CTGCTTTGACGATGTGGCGAAGTTCAAGCGCGTGTACAAGGTCGAGCTGAGCGATGCCAACGCCGGCGGGCCGCTGCGCA AGATCGGCTATATCGACCTGCTGCGCATTGCCGACCCGGCCAAGCTTGCGCGCAAGCCGTTGACCGATGGCGTGCTGGCG TTCCCGTTCTTCACCATCGAGAACGTCGACGTGGTCGACGCCACGCATATCGTGGTGGGCAACGACAACAACCTGCCCTT CAGCAGCAGCCGCGAGCCGAACAAGGCGGACGACAACGAACTGGTGTTGCTGGAGGTGGGGGAGTTCCTGAAGGCGCGGT GA
Upstream 100 bases:
>100_bases CGCAACATGCCGGGGCCGTGCGCCCCACGGATCACAGTTCTGTCAAACTTGGCGCCGACAATGCAGGGTTTTGTCCTCTT CAACGCCAAGGAAAACCACA
Downstream 100 bases:
>100_bases GCGTCTGCTGTGATGGGGGGTGCTCCCCTCTCCCGCTTGCGGGAGAGGGGAGAAAACAAACAGGCTACGCTTACGCCGCC AGCCTGAACGTCGACACCGC
Product: putative periplasmic protein
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSRHLLLAPAAIALGCLGAAQAWAQAPVAYPARLAGHAVLPAQTLLAVPKDAPADLQVSGKFTTAQRVDTPGTVEGKSNG RPTGVSLPFRGQPAQGHSGIKRMADGSFWVLTDNGAGAKANSPDFMLYLNHYKVDFGSGRLQRLKTIFLHDPDQKVPFRI VHEGTRQRYLTGSDFDTESFQFADGAIWIGDEFGPFLIKADLDGKVLAVFDTKVDGKVVRSPDHPAVTAPGAPDGSVKFQ VRRSKGFEGMASSPDGSKLYALLEGALWDEAAKGYENEGGKPYLRVLEFDVRQQAWTGRHWKYVLEGASHAIGDFNMFNA TTGLIIERDNGEGTPDKACPAGQKRPDCFDDVAKFKRVYKVELSDANAGGPLRKIGYIDLLRIADPAKLARKPLTDGVLA FPFFTIENVDVVDATHIVVGNDNNLPFSSSREPNKADDNELVLLEVGEFLKAR
Sequences:
>Translated_453_residues MSRHLLLAPAAIALGCLGAAQAWAQAPVAYPARLAGHAVLPAQTLLAVPKDAPADLQVSGKFTTAQRVDTPGTVEGKSNG RPTGVSLPFRGQPAQGHSGIKRMADGSFWVLTDNGAGAKANSPDFMLYLNHYKVDFGSGRLQRLKTIFLHDPDQKVPFRI VHEGTRQRYLTGSDFDTESFQFADGAIWIGDEFGPFLIKADLDGKVLAVFDTKVDGKVVRSPDHPAVTAPGAPDGSVKFQ VRRSKGFEGMASSPDGSKLYALLEGALWDEAAKGYENEGGKPYLRVLEFDVRQQAWTGRHWKYVLEGASHAIGDFNMFNA TTGLIIERDNGEGTPDKACPAGQKRPDCFDDVAKFKRVYKVELSDANAGGPLRKIGYIDLLRIADPAKLARKPLTDGVLA FPFFTIENVDVVDATHIVVGNDNNLPFSSSREPNKADDNELVLLEVGEFLKAR >Mature_452_residues SRHLLLAPAAIALGCLGAAQAWAQAPVAYPARLAGHAVLPAQTLLAVPKDAPADLQVSGKFTTAQRVDTPGTVEGKSNGR PTGVSLPFRGQPAQGHSGIKRMADGSFWVLTDNGAGAKANSPDFMLYLNHYKVDFGSGRLQRLKTIFLHDPDQKVPFRIV HEGTRQRYLTGSDFDTESFQFADGAIWIGDEFGPFLIKADLDGKVLAVFDTKVDGKVVRSPDHPAVTAPGAPDGSVKFQV RRSKGFEGMASSPDGSKLYALLEGALWDEAAKGYENEGGKPYLRVLEFDVRQQAWTGRHWKYVLEGASHAIGDFNMFNAT TGLIIERDNGEGTPDKACPAGQKRPDCFDDVAKFKRVYKVELSDANAGGPLRKIGYIDLLRIADPAKLARKPLTDGVLAF PFFTIENVDVVDATHIVVGNDNNLPFSSSREPNKADDNELVLLEVGEFLKAR
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49090; Mature: 48959
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHLLLAPAAIALGCLGAAQAWAQAPVAYPARLAGHAVLPAQTLLAVPKDAPADLQVSG CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEECCCHHHEECCCCCCCCEEECC KFTTAQRVDTPGTVEGKSNGRPTGVSLPFRGQPAQGHSGIKRMADGSFWVLTDNGAGAKA CEEEHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC NSPDFMLYLNHYKVDFGSGRLQRLKTIFLHDPDQKVPFRIVHEGTRQRYLTGSDFDTESF CCCCEEEEEEEEEEECCCCHHEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCCCE QFADGAIWIGDEFGPFLIKADLDGKVLAVFDTKVDGKVVRSPDHPAVTAPGAPDGSVKFQ EECCCEEEECCCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCEEECCCCCCCCEEEE VRRSKGFEGMASSPDGSKLYALLEGALWDEAAKGYENEGGKPYLRVLEFDVRQQAWTGRH EEECCCCCCCCCCCCCCEEHEEHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCC WKYVLEGASHAIGDFNMFNATTGLIIERDNGEGTPDKACPAGQKRPDCFDDVAKFKRVYK EEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEE VELSDANAGGPLRKIGYIDLLRIADPAKLARKPLTDGVLAFPFFTIENVDVVDATHIVVG EEECCCCCCCCCHHCCCEEEEEECCHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEEEEE NDNNLPFSSSREPNKADDNELVLLEVGEFLKAR CCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCC >Mature Secondary Structure SRHLLLAPAAIALGCLGAAQAWAQAPVAYPARLAGHAVLPAQTLLAVPKDAPADLQVSG CCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEECCCHHHEECCCCCCCCEEECC KFTTAQRVDTPGTVEGKSNGRPTGVSLPFRGQPAQGHSGIKRMADGSFWVLTDNGAGAKA CEEEHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC NSPDFMLYLNHYKVDFGSGRLQRLKTIFLHDPDQKVPFRIVHEGTRQRYLTGSDFDTESF CCCCEEEEEEEEEEECCCCHHEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCCCCCE QFADGAIWIGDEFGPFLIKADLDGKVLAVFDTKVDGKVVRSPDHPAVTAPGAPDGSVKFQ EECCCEEEECCCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCEEECCCCCCCCEEEE VRRSKGFEGMASSPDGSKLYALLEGALWDEAAKGYENEGGKPYLRVLEFDVRQQAWTGRH EEECCCCCCCCCCCCCCEEHEEHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCC WKYVLEGASHAIGDFNMFNATTGLIIERDNGEGTPDKACPAGQKRPDCFDDVAKFKRVYK EEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEE VELSDANAGGPLRKIGYIDLLRIADPAKLARKPLTDGVLAFPFFTIENVDVVDATHIVVG EEECCCCCCCCCHHCCCEEEEEECCHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEEEEE NDNNLPFSSSREPNKADDNELVLLEVGEFLKAR CCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA