| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is fusA [H]
Identifier: 116695847
GI number: 116695847
Start: 2157403
End: 2159457
Strand: Direct
Name: fusA [H]
Synonym: H16_B1911
Alternate gene names: 116695847
Gene position: 2157403-2159457 (Clockwise)
Preceding gene: 116695846
Following gene: 116695852
Centisome position: 74.07
GC content: 66.42
Gene sequence:
>2055_bases ATGCACGATAGTCCCGATGCCATCCGCACCGTCGCCTTGCTAGGGCACGCGGGGTGCGGCAAGACCTCGCTGGTCGAAGC GCTGTTGCACAAGGGCGGTGCCCTGCACACGCCCGGCAGCGTCGAACGCGGTTCCACGGTGTGCGACAGCGACCCGCTCG AGCGCAAGTACAAACGCTCGCTCACCACCGCCGCCGCCCACCTGCACTACCGCGACACCCGCATCTACCTGCTTGACACC CCCGGTTATCCCGACTTCTCCGGCCTCGCCATCAGCGCGCTGGCGGCGGTGGAAACCGCCGCCATCGTCATCAATGCCCA GACCGGCATCGAGATGACCACGCGCCGCGCGATGGCGTGGGCGCAGGCGCGCCAGCTGTGCCGGATGATCATCGTCAACG GCATCGACGGCGACAAGGTCGACCTGCCCGCGCTGCTTGCGGACATCCAGGAGGCCTTTGGCAAGGAATGCCTGCCGATC AACCTGCCTGCCGGCAACGGCAGCCAGGTGGTGGACTGCTTCTTCAATCCGGCCGGCGAGTCGGATTTTTTATCTGTTCC CGCCGCCCACGATGCGCTGATCGACCAGGTGATCGAGATCGATCCCGAACTGATGGAGCTGTACCTGGAACAAGGCGAGG CGATCACGCCGGAGCAGCTGCACGCGCCATTCGAGCGCGCGCTGCGCGAAGGCCACCTGGTGCCGATCTGCTTTACCTCG GCCGCCACCGGCGCCGGCATCACGGAACTGCTCGACGTGTTCGTGCAACTGCTGCCCAACCCGACTGAAGGCAATCCGCC GCTGTTCTATCGCGATACGGGCGATGGCAGCGAACACCGCAAGGCCGTGCGCGCCGAGCCCGTGCCTGACAAGCACGTGC TGGCCCATGTCTTCAAGGTGGTGATCGACCCCTATGTCGGCAAGCTGGCGGTGTTCCGCATCCACCAGGGCACGGTCACG CGCGACAGCCAGCTCTATATCGGCGACGGGCGCCAGCCGTTCAAGGTGGCGCACCTGCTGCGGCTGCAGGGCAAGGAGAC CCAGGAGATCCCGCGGGCCGGCCCGGGCGATATCTGCGCAGTGGCCAAGGTCGACGAACTGGGCTTCGATGCCGTGCTGC ACGACGCCACCGAGGACGGCAATATCCACCTGACGCCGCTGGAGTTCCCAACTCCCATCTACGGGCTGGCGATCGAACCG GCGCGGCGCGGCAACGAGCAGCGCCTGGCCGAAGTGCTGCACAAGCTTAGCGCGGAAGACCCGTGCCTGCGCGTCGAGCA TCCGGTTGGCACCAATGAGACCGTGGTGTTCGGCCTGGGCGAATTCCATCTGCGCTGCGCGCTGGAGCGGCTGACCGAGC AATACAAGCTGGAGGTGGTGACGCGCCCGCCCAAGATTGCCTATCGCGAAACCATCGGCGGCAAGGCCGAGGGCCATCAC CGGCACAAGAAGCAGACCGGCGGCGCCGGGCAGTTCGGTGAAGTGATGCTGCGCGTGGAGCCGCTGGCGCGCGGCGAGGG CTTCGACTTTGTCGATGCGGTCAAGGGCGGCGCGATTCCCGGCCAGTTCATTCCCGCCGTGGAAAAAGGCATCCGCCAGG TGCTGGACAGCGGCCCGCTGGCGGGCTTCCCGATGCAGGACGTGCGCGTGACCGTGTATGACGGCAAGAGCCATCCGGTC GATTCCAAGGAAGTCGCGTTCGCGACCGCCGGGCGCAAGGCCTTTATCGACGCGGTGCTCAAGGCCAGGCCCAGCGTGCT GGAACCGATCGTCGACATCGAGGTGACGGCGCCGGGCACAGCCATGGGCGACATCATCGGCGACCTCTCAACCAAGCGCG GCCAGGTCCACGGCACGCGCACCGCGGTCGGCAACGCCGTGGTGGTGGCCGGCCAGGTGCCGCTGTCCGAGCTCAACGAC TACCAGTCACGGCTGAACAGCATCACCGGCGGCCACGGCAGCTATACCATCCAGTTCAGCCACTACGACAACGTGCCGCC GGCGCAGCAGGACAAGATGGCATCGAAACACAAGGCGCAGCAGGATACGGATTGA
Upstream 100 bases:
>100_bases TCTTGCGTCAGGCAATGCACCGAGTCGGGCATCCGCGTATGTCGCTTCCGGCGAATTTCGCCAATAATTCCCGGACAGCC ATTGCCGGACGAGAGCCACC
Downstream 100 bases:
>100_bases GGGGTTCGCGCCCGCGGCTGCATCTAGTACGTTTCCAGATGCAGCCGCCCTTCCCGCTTCAACCCTTCAGCCAGCGCCTC CCATTGCAGCCCCGCCTGCT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MHDSPDAIRTVALLGHAGCGKTSLVEALLHKGGALHTPGSVERGSTVCDSDPLERKYKRSLTTAAAHLHYRDTRIYLLDT PGYPDFSGLAISALAAVETAAIVINAQTGIEMTTRRAMAWAQARQLCRMIIVNGIDGDKVDLPALLADIQEAFGKECLPI NLPAGNGSQVVDCFFNPAGESDFLSVPAAHDALIDQVIEIDPELMELYLEQGEAITPEQLHAPFERALREGHLVPICFTS AATGAGITELLDVFVQLLPNPTEGNPPLFYRDTGDGSEHRKAVRAEPVPDKHVLAHVFKVVIDPYVGKLAVFRIHQGTVT RDSQLYIGDGRQPFKVAHLLRLQGKETQEIPRAGPGDICAVAKVDELGFDAVLHDATEDGNIHLTPLEFPTPIYGLAIEP ARRGNEQRLAEVLHKLSAEDPCLRVEHPVGTNETVVFGLGEFHLRCALERLTEQYKLEVVTRPPKIAYRETIGGKAEGHH RHKKQTGGAGQFGEVMLRVEPLARGEGFDFVDAVKGGAIPGQFIPAVEKGIRQVLDSGPLAGFPMQDVRVTVYDGKSHPV DSKEVAFATAGRKAFIDAVLKARPSVLEPIVDIEVTAPGTAMGDIIGDLSTKRGQVHGTRTAVGNAVVVAGQVPLSELND YQSRLNSITGGHGSYTIQFSHYDNVPPAQQDKMASKHKAQQDTD
Sequences:
>Translated_684_residues MHDSPDAIRTVALLGHAGCGKTSLVEALLHKGGALHTPGSVERGSTVCDSDPLERKYKRSLTTAAAHLHYRDTRIYLLDT PGYPDFSGLAISALAAVETAAIVINAQTGIEMTTRRAMAWAQARQLCRMIIVNGIDGDKVDLPALLADIQEAFGKECLPI NLPAGNGSQVVDCFFNPAGESDFLSVPAAHDALIDQVIEIDPELMELYLEQGEAITPEQLHAPFERALREGHLVPICFTS AATGAGITELLDVFVQLLPNPTEGNPPLFYRDTGDGSEHRKAVRAEPVPDKHVLAHVFKVVIDPYVGKLAVFRIHQGTVT RDSQLYIGDGRQPFKVAHLLRLQGKETQEIPRAGPGDICAVAKVDELGFDAVLHDATEDGNIHLTPLEFPTPIYGLAIEP ARRGNEQRLAEVLHKLSAEDPCLRVEHPVGTNETVVFGLGEFHLRCALERLTEQYKLEVVTRPPKIAYRETIGGKAEGHH RHKKQTGGAGQFGEVMLRVEPLARGEGFDFVDAVKGGAIPGQFIPAVEKGIRQVLDSGPLAGFPMQDVRVTVYDGKSHPV DSKEVAFATAGRKAFIDAVLKARPSVLEPIVDIEVTAPGTAMGDIIGDLSTKRGQVHGTRTAVGNAVVVAGQVPLSELND YQSRLNSITGGHGSYTIQFSHYDNVPPAQQDKMASKHKAQQDTD >Mature_684_residues MHDSPDAIRTVALLGHAGCGKTSLVEALLHKGGALHTPGSVERGSTVCDSDPLERKYKRSLTTAAAHLHYRDTRIYLLDT PGYPDFSGLAISALAAVETAAIVINAQTGIEMTTRRAMAWAQARQLCRMIIVNGIDGDKVDLPALLADIQEAFGKECLPI NLPAGNGSQVVDCFFNPAGESDFLSVPAAHDALIDQVIEIDPELMELYLEQGEAITPEQLHAPFERALREGHLVPICFTS AATGAGITELLDVFVQLLPNPTEGNPPLFYRDTGDGSEHRKAVRAEPVPDKHVLAHVFKVVIDPYVGKLAVFRIHQGTVT RDSQLYIGDGRQPFKVAHLLRLQGKETQEIPRAGPGDICAVAKVDELGFDAVLHDATEDGNIHLTPLEFPTPIYGLAIEP ARRGNEQRLAEVLHKLSAEDPCLRVEHPVGTNETVVFGLGEFHLRCALERLTEQYKLEVVTRPPKIAYRETIGGKAEGHH RHKKQTGGAGQFGEVMLRVEPLARGEGFDFVDAVKGGAIPGQFIPAVEKGIRQVLDSGPLAGFPMQDVRVTVYDGKSHPV DSKEVAFATAGRKAFIDAVLKARPSVLEPIVDIEVTAPGTAMGDIIGDLSTKRGQVHGTRTAVGNAVVVAGQVPLSELND YQSRLNSITGGHGSYTIQFSHYDNVPPAQQDKMASKHKAQQDTD
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=697, Percent_Identity=27.8335724533716, Blast_Score=293, Evalue=3e-79, Organism=Homo sapiens, GI19923640, Length=727, Percent_Identity=25.8596973865199, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI25306287, Length=305, Percent_Identity=28.5245901639344, Blast_Score=140, Evalue=5e-33, Organism=Homo sapiens, GI25306283, Length=382, Percent_Identity=26.1780104712042, Blast_Score=100, Evalue=8e-21, Organism=Homo sapiens, GI4503483, Length=437, Percent_Identity=22.6544622425629, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1789738, Length=693, Percent_Identity=31.1688311688312, Blast_Score=339, Evalue=4e-94, Organism=Escherichia coli, GI1790835, Length=481, Percent_Identity=25.1559251559252, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI48994988, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17533571, Length=707, Percent_Identity=28.4299858557284, Blast_Score=283, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17556745, Length=716, Percent_Identity=22.7653631284916, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17506493, Length=437, Percent_Identity=22.1967963386728, Blast_Score=78, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=706, Percent_Identity=27.7620396600567, Blast_Score=291, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6322359, Length=775, Percent_Identity=22.7096774193548, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24582462, Length=707, Percent_Identity=28.005657708628, Blast_Score=280, Evalue=4e-75, Organism=Drosophila melanogaster, GI221458488, Length=731, Percent_Identity=25.4445964432285, Blast_Score=191, Evalue=1e-48,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 73898; Mature: 73898
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDSPDAIRTVALLGHAGCGKTSLVEALLHKGGALHTPGSVERGSTVCDSDPLERKYKRS CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LTTAAAHLHYRDTRIYLLDTPGYPDFSGLAISALAAVETAAIVINAQTGIEMTTRRAMAW HHHHHHHEEEECEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHH AQARQLCRMIIVNGIDGDKVDLPALLADIQEAFGKECLPINLPAGNGSQVVDCFFNPAGE HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCC SDFLSVPAAHDALIDQVIEIDPELMELYLEQGEAITPEQLHAPFERALREGHLVPICFTS CCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECC AATGAGITELLDVFVQLLPNPTEGNPPLFYRDTGDGSEHRKAVRAEPVPDKHVLAHVFKV CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHH VIDPYVGKLAVFRIHQGTVTRDSQLYIGDGRQPFKVAHLLRLQGKETQEIPRAGPGDICA HHHHHHCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCCCEEE VAKVDELGFDAVLHDATEDGNIHLTPLEFPTPIYGLAIEPARRGNEQRLAEVLHKLSAED EEEHHHCCCHHHHCCCCCCCCEEEEECCCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCC PCLRVEHPVGTNETVVFGLGEFHLRCALERLTEQYKLEVVTRPPKIAYRETIGGKAEGHH CCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCH RHKKQTGGAGQFGEVMLRVEPLARGEGFDFVDAVKGGAIPGQFIPAVEKGIRQVLDSGPL HHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC AGFPMQDVRVTVYDGKSHPVDSKEVAFATAGRKAFIDAVLKARPSVLEPIVDIEVTAPGT CCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHCCCEEEEEECCCC AMGDIIGDLSTKRGQVHGTRTAVGNAVVVAGQVPLSELNDYQSRLNSITGGHGSYTIQFS HHHHHHHHCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEC HYDNVPPAQQDKMASKHKAQQDTD CCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MHDSPDAIRTVALLGHAGCGKTSLVEALLHKGGALHTPGSVERGSTVCDSDPLERKYKRS CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LTTAAAHLHYRDTRIYLLDTPGYPDFSGLAISALAAVETAAIVINAQTGIEMTTRRAMAW HHHHHHHEEEECEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHH AQARQLCRMIIVNGIDGDKVDLPALLADIQEAFGKECLPINLPAGNGSQVVDCFFNPAGE HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCC SDFLSVPAAHDALIDQVIEIDPELMELYLEQGEAITPEQLHAPFERALREGHLVPICFTS CCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECC AATGAGITELLDVFVQLLPNPTEGNPPLFYRDTGDGSEHRKAVRAEPVPDKHVLAHVFKV CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHH VIDPYVGKLAVFRIHQGTVTRDSQLYIGDGRQPFKVAHLLRLQGKETQEIPRAGPGDICA HHHHHHCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCCCEEE VAKVDELGFDAVLHDATEDGNIHLTPLEFPTPIYGLAIEPARRGNEQRLAEVLHKLSAED EEEHHHCCCHHHHCCCCCCCCEEEEECCCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCC PCLRVEHPVGTNETVVFGLGEFHLRCALERLTEQYKLEVVTRPPKIAYRETIGGKAEGHH CCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCH RHKKQTGGAGQFGEVMLRVEPLARGEGFDFVDAVKGGAIPGQFIPAVEKGIRQVLDSGPL HHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC AGFPMQDVRVTVYDGKSHPVDSKEVAFATAGRKAFIDAVLKARPSVLEPIVDIEVTAPGT CCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHCCCEEEEEECCCC AMGDIIGDLSTKRGQVHGTRTAVGNAVVVAGQVPLSELNDYQSRLNSITGGHGSYTIQFS HHHHHHHHCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEC HYDNVPPAQQDKMASKHKAQQDTD CCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]