| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is ykvO [H]
Identifier: 116695703
GI number: 116695703
Start: 2008105
End: 2008854
Strand: Direct
Name: ykvO [H]
Synonym: H16_B1767
Alternate gene names: 116695703
Gene position: 2008105-2008854 (Clockwise)
Preceding gene: 116695700
Following gene: 116695704
Centisome position: 68.95
GC content: 66.8
Gene sequence:
>750_bases ATGAATCGCTTCGAAGGCAAGACCGTTCTGATCACTGGCGGCAACAGCGGCATCGGCCTGGCGGCTGCCCAGGCATTCGC CCAGGAAGGCGCCCGCGTGGTCATCACCGGCCGCGACGCAGCGGCACTGGAGGGCGCCCGCGCCACGCTCGGCAACGAGG CCATCGCCATCCGCAACGAAACCGGCACCGTGCAGGCCGCGCGTGACCTGGCTCGCCAGCTGACCGACGCAGGCATCCGC CTGGACGCCGTCTTCATCAACGCCGGCATTGCCAAGTTTGCCGCCGTTGCCGATGTGGACGAGGCACTGTGGGACGCCAC CTTCAACGCCAACGTGAAGGGCGCGTACTTCCAGATCCAGGCGCTGCTGCCGCTGCTGAACCGGGGCACGTCGATCGTGC TGAACGGCTCGATCAATGCGCGCATCGGCATGCCGATGTCTTCCGTGTATGCCGCCAGCAAGGCAGCACTGATCTCGCTT GCCAGGACCCTGTCGGGTGAGCTGGTCAGCTCGGGCATCCGGGTAAATGTGGTCAGCCCCGGGCCGGTGACGACGCCGCT GTACGGCAAGCTGGGCCTGGAAGCCGACACCCTGTCGGCCACTGCCGCGCAGATCCAGAGCCGGATTCCGCTGGGCCGCT TCGGCCTGCCGGCGGAGATTGCGTCGACGGTGCTGCATCTGTCGGCGCCCGAATCGGCCTTCATCGTCGGTACGGAAATC ATCGCCGACGGCGGCATGAGCCAACTGTAA
Upstream 100 bases:
>100_bases GAACGTGTTCGTCGGATTGATCGTATGGCAAACCGGAGGCCAGCGCCCATACTCCAGTCACGCAATTGTTCAAATTCACC TTTCCCGATTGGAGGACATC
Downstream 100 bases:
>100_bases GTCAATGCCTCTGCGGGCCGCGGCGTGGGCGCGGTCTGCGCATGAGGTGGCCCATCCTGCCTGGAGCAGCTTCATGAACC AATCCATTGCCTTTATCGTC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNRFEGKTVLITGGNSGIGLAAAQAFAQEGARVVITGRDAAALEGARATLGNEAIAIRNETGTVQAARDLARQLTDAGIR LDAVFINAGIAKFAAVADVDEALWDATFNANVKGAYFQIQALLPLLNRGTSIVLNGSINARIGMPMSSVYAASKAALISL ARTLSGELVSSGIRVNVVSPGPVTTPLYGKLGLEADTLSATAAQIQSRIPLGRFGLPAEIASTVLHLSAPESAFIVGTEI IADGGMSQL
Sequences:
>Translated_249_residues MNRFEGKTVLITGGNSGIGLAAAQAFAQEGARVVITGRDAAALEGARATLGNEAIAIRNETGTVQAARDLARQLTDAGIR LDAVFINAGIAKFAAVADVDEALWDATFNANVKGAYFQIQALLPLLNRGTSIVLNGSINARIGMPMSSVYAASKAALISL ARTLSGELVSSGIRVNVVSPGPVTTPLYGKLGLEADTLSATAAQIQSRIPLGRFGLPAEIASTVLHLSAPESAFIVGTEI IADGGMSQL >Mature_249_residues MNRFEGKTVLITGGNSGIGLAAAQAFAQEGARVVITGRDAAALEGARATLGNEAIAIRNETGTVQAARDLARQLTDAGIR LDAVFINAGIAKFAAVADVDEALWDATFNANVKGAYFQIQALLPLLNRGTSIVLNGSINARIGMPMSSVYAASKAALISL ARTLSGELVSSGIRVNVVSPGPVTTPLYGKLGLEADTLSATAAQIQSRIPLGRFGLPAEIASTVLHLSAPESAFIVGTEI IADGGMSQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=251, Percent_Identity=33.0677290836653, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=31.7073170731707, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=33.0769230769231, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=31.3008130081301, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=30.5220883534137, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=28, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=27.8625954198473, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI33667109, Length=185, Percent_Identity=34.0540540540541, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI126723191, Length=179, Percent_Identity=34.6368715083799, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=30.3964757709251, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=29.6747967479675, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI223718074, Length=217, Percent_Identity=30.8755760368664, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI7657478, Length=192, Percent_Identity=32.2916666666667, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI10190704, Length=264, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=29.2307692307692, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=29.7435897435897, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI4504505, Length=191, Percent_Identity=28.2722513089005, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789378, Length=239, Percent_Identity=33.4728033472803, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=36.2549800796813, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=28.6821705426357, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=32.6612903225806, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=30.9236947791165, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=30.8, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=29.5546558704453, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=27.710843373494, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=26.530612244898, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1786701, Length=182, Percent_Identity=34.6153846153846, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI2367175, Length=270, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787526, Length=184, Percent_Identity=29.8913043478261, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787820, Length=193, Percent_Identity=25.9067357512953, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=33.587786259542, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=34.0996168582375, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=34.5588235294118, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=30.952380952381, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=32.0610687022901, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=33.0798479087452, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=30.7116104868914, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=32.9588014981273, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=32.2097378277154, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17563726, Length=262, Percent_Identity=33.206106870229, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=32.089552238806, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=32.319391634981, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=31.0861423220974, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=29.7619047619048, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=30.3643724696356, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562910, Length=270, Percent_Identity=31.1111111111111, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=33.0827067669173, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71994600, Length=244, Percent_Identity=30.7377049180328, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17551412, Length=274, Percent_Identity=30.6569343065693, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=30.4, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=28.7449392712551, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536651, Length=285, Percent_Identity=28.7719298245614, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17565030, Length=276, Percent_Identity=31.8840579710145, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536025, Length=274, Percent_Identity=28.4671532846715, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17538182, Length=263, Percent_Identity=31.1787072243346, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508895, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17568967, Length=189, Percent_Identity=29.1005291005291, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=254, Percent_Identity=24.4094488188976, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=33.0708661417323, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=32.6530612244898, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=29.8804780876494, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=31.3253012048193, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=32.5102880658436, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=27.843137254902, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=26.6932270916335, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24644337, Length=247, Percent_Identity=29.5546558704453, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21358495, Length=199, Percent_Identity=28.643216080402, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24647946, Length=205, Percent_Identity=27.3170731707317, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45553409, Length=204, Percent_Identity=27.4509803921569, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647948, Length=204, Percent_Identity=27.4509803921569, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25531; Mature: 25531
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFEGKTVLITGGNSGIGLAAAQAFAQEGARVVITGRDAAALEGARATLGNEAIAIRNE CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHCCCCEEEEECC TGTVQAARDLARQLTDAGIRLDAVFINAGIAKFAAVADVDEALWDATFNANVKGAYFQIQ CCCHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHH ALLPLLNRGTSIVLNGSINARIGMPMSSVYAASKAALISLARTLSGELVSSGIRVNVVSP HHHHHHCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC GPVTTPLYGKLGLEADTLSATAAQIQSRIPLGRFGLPAEIASTVLHLSAPESAFIVGTEI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCEEEEEEHE IADGGMSQL EECCCCCCC >Mature Secondary Structure MNRFEGKTVLITGGNSGIGLAAAQAFAQEGARVVITGRDAAALEGARATLGNEAIAIRNE CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHCCCCEEEEECC TGTVQAARDLARQLTDAGIRLDAVFINAGIAKFAAVADVDEALWDATFNANVKGAYFQIQ CCCHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHH ALLPLLNRGTSIVLNGSINARIGMPMSSVYAASKAALISLARTLSGELVSSGIRVNVVSP HHHHHHCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC GPVTTPLYGKLGLEADTLSATAAQIQSRIPLGRFGLPAEIASTVLHLSAPESAFIVGTEI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCEEEEEEHE IADGGMSQL EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]