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The map label for this gene is grsT [H]

Identifier: 116695629

GI number: 116695629

Start: 1920251

End: 1921069

Strand: Direct

Name: grsT [H]

Synonym: H16_B1690

Alternate gene names: 116695629

Gene position: 1920251-1921069 (Clockwise)

Preceding gene: 116695628

Following gene: 116695630

Centisome position: 65.93

GC content: 74.11

Gene sequence:

>819_bases
ATGAGCCCCGCGCAGCCGATGCGCGATCCCTGGTACGCCGTGATGCCGGGCCGCAGCGGGCCGGCTGCCGGCGATCGCGT
GCGCCTGTACTGCCTGCCCTATGCCGGCGCCGGCCATACCGCGTACCACGGCTGGCGCGCCGCGCTGCCTGCCGCGATCG
AGCTGGCGCCGGTATGCCTGCCCGGACGCGGCACGCGCACTGCCGAACCGCATGGCGCATCGATCCATGCGCTGGCCAGC
GCGCTGGCCGCCTCGATCGCGCGCGCGGCCCGAGCCGAAGCGCCGCGCTTTGCGCTGTTCGGCCACAGCATGGGTGCGCT
GCTGGGGTTCGAGACCGCGCGCGCGCTTGAAACCGTGCATGGCCTCTCCCCCGCCGCGCTGGTGGTGTCCGGGCGCGGCG
CGCCCGCGCTGCCGTCGGCTCGGCCGCCGTTCAGCAGCCTGCCGGACGGCGCCTTTGCCGACGTCATCGCCGCCATGGGC
GGCATGCCGGCCGAGATCCGCGAAACGCCGGAAGCGCTCGCCTTCTTCCTGCCCGTGCTGCGCGCGGATATCGCGTTGTG
CGAGGCCTGGCGCTACCGTCCGGGCCCGCGGCTGGGCTGTCCGGTCACAGTGCTCGGCGGCAGGGACGACGTCCACGCCC
CGCCCGCGATGCTGGCCGCGTGGCGCGACGAGACCCTGCACGACTGCAGCCACCGGCTGTTCGCGGGCGGGCATTTCTTC
CTGCACGAGGCGGCGCAGGACGTGCTGGACACCATCACGGATGCCGTGCTCGGTTCCACGATGCGCGCCACCAGAGACCA
CGGCCATGCGCTCGCCTGA

Upstream 100 bases:

>100_bases
GCGTGGGCTTCCAGGGCAGCCGCGACGAGTGCCTGGCGCATATCGAGACGGTCTGGACCGATATGCGTCCGCTGAGCCTG
CAGCGCGCGCTGGCCGGCGC

Downstream 100 bases:

>100_bases
CATGGCCGCGCCAGCGCACGGCGAGATCCAGGTCTGGCACGTGGCAGTCGACGCTGCGGCAGACCTGTCGGCGCTGTCGG
CAAGCGAACGCGCGCGCGCC

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSPAQPMRDPWYAVMPGRSGPAAGDRVRLYCLPYAGAGHTAYHGWRAALPAAIELAPVCLPGRGTRTAEPHGASIHALAS
ALAASIARAARAEAPRFALFGHSMGALLGFETARALETVHGLSPAALVVSGRGAPALPSARPPFSSLPDGAFADVIAAMG
GMPAEIRETPEALAFFLPVLRADIALCEAWRYRPGPRLGCPVTVLGGRDDVHAPPAMLAAWRDETLHDCSHRLFAGGHFF
LHEAAQDVLDTITDAVLGSTMRATRDHGHALA

Sequences:

>Translated_272_residues
MSPAQPMRDPWYAVMPGRSGPAAGDRVRLYCLPYAGAGHTAYHGWRAALPAAIELAPVCLPGRGTRTAEPHGASIHALAS
ALAASIARAARAEAPRFALFGHSMGALLGFETARALETVHGLSPAALVVSGRGAPALPSARPPFSSLPDGAFADVIAAMG
GMPAEIRETPEALAFFLPVLRADIALCEAWRYRPGPRLGCPVTVLGGRDDVHAPPAMLAAWRDETLHDCSHRLFAGGHFF
LHEAAQDVLDTITDAVLGSTMRATRDHGHALA
>Mature_271_residues
SPAQPMRDPWYAVMPGRSGPAAGDRVRLYCLPYAGAGHTAYHGWRAALPAAIELAPVCLPGRGTRTAEPHGASIHALASA
LAASIARAARAEAPRFALFGHSMGALLGFETARALETVHGLSPAALVVSGRGAPALPSARPPFSSLPDGAFADVIAAMGG
MPAEIRETPEALAFFLPVLRADIALCEAWRYRPGPRLGCPVTVLGGRDDVHAPPAMLAAWRDETLHDCSHRLFAGGHFFL
HEAAQDVLDTITDAVLGSTMRATRDHGHALA

Specific function: Probable thioesterase involved in the biosynthesis of gramicidin S [H]

COG id: COG3208

COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase family [H]

Homologues:

Organism=Homo sapiens, GI89257335, Length=227, Percent_Identity=26.8722466960352, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI8922871, Length=195, Percent_Identity=27.1794871794872, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012223
- InterPro:   IPR001031 [H]

Pfam domain/function: PF00975 Thioesterase [H]

EC number: NA

Molecular weight: Translated: 28508; Mature: 28377

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAQPMRDPWYAVMPGRSGPAAGDRVRLYCLPYAGAGHTAYHGWRAALPAAIELAPVCL
CCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHCCHHHHCCHHHHHEEEEE
PGRGTRTAEPHGASIHALASALAASIARAARAEAPRFALFGHSMGALLGFETARALETVH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHHHHHHHHHHHHH
GLSPAALVVSGRGAPALPSARPPFSSLPDGAFADVIAAMGGMPAEIRETPEALAFFLPVL
CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHH
RADIALCEAWRYRPGPRLGCPVTVLGGRDDVHAPPAMLAAWRDETLHDCSHRLFAGGHFF
HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
LHEAAQDVLDTITDAVLGSTMRATRDHGHALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SPAQPMRDPWYAVMPGRSGPAAGDRVRLYCLPYAGAGHTAYHGWRAALPAAIELAPVCL
CCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHCCHHHHCCHHHHHEEEEE
PGRGTRTAEPHGASIHALASALAASIARAARAEAPRFALFGHSMGALLGFETARALETVH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHHHHHHHHHHHHH
GLSPAALVVSGRGAPALPSARPPFSSLPDGAFADVIAAMGGMPAEIRETPEALAFFLPVL
CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHH
RADIALCEAWRYRPGPRLGCPVTVLGGRDDVHAPPAMLAAWRDETLHDCSHRLFAGGHFF
HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
LHEAAQDVLDTITDAVLGSTMRATRDHGHALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2477357; 7512553 [H]