| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is gltI [H]
Identifier: 116695573
GI number: 116695573
Start: 1845889
End: 1846827
Strand: Direct
Name: gltI [H]
Synonym: H16_B1634
Alternate gene names: 116695573
Gene position: 1845889-1846827 (Clockwise)
Preceding gene: 116695572
Following gene: 116695574
Centisome position: 63.38
GC content: 69.01
Gene sequence:
>939_bases ATGCCTGCCTTCACCCTGCCCGCCCTGTCCGCCCGACTCCTCCGCGCCCGCCGCTCGCTGGCCGCCGTCGCCCTCGCCGC CATGTCCGCGGCCGCGCTGACGCCGGCACTGGCCAGCACCCAGAGCCCTGTGCTCGACAAGATCCGCGAATCCGGCACCA TCGTGCTCGGTTACCGCGAGTCGGCGCTGCCATTCTCGTTTGCCGATGACAAGGGCCAGCCGGCCGGCTATGCGGTCGAC CTTTGCCTGCGCGCCGCCGAAGCAGCACGCCAGCAACTGGGCCTGAAAGACCTGAAGGTGCGCTGGATGCCGCTCACGCC GCAGAACCGCATTCCCGCCGTGGTCAACGGGCTGGTCGATCTGGACTGCGCGCCCAACACCAATTCGCTTGAGCGCCAGA AGCAGGTTGCGTTCAGCGTCTCGCACTATGTGTCGACCGTGCGCATGCTGGTGCGCGCCGACTCCGGCATCCGCTCGTTC GGCGACCTGCGCGGCAAGACCGTGGTCACCAGCGCCGGATCGACCGGCGACCGCCACGTGCGCCGCATGAAGGCCCAGTA CGGCTACCACGACGTCTACGCCAAGGACCATGGCGAATCGTTCCTGCTGCTCGAATCCGGCCGTGCCCAGGCCTTCGTCA TGGACGATGTGCTGCTGGCTGGCCTGCGCGCCCGCGCCAAGGACCCGTCGCAATACGTGATCGTGGGCCCGGCGCTGTCG GTGGAGCAGAATGCGCTGATGCTGTCCAAGGCCGATCCGGAATGGAAGCGCCTGGTCGACCAGGCGCTGGCCAACACCTT TGCCGGCCCGGAGGTCACGGCGCTGCAGAAGCGCTGGTTCCAGCAGCCCATCGGCAGCCGCGGCATCAACCTGGCGCTGG CGCCGTCCGGCGAGGTGCGCGCGGCCTGGAAGCACCCGTCGGACGCGGTCACGGAGTAA
Upstream 100 bases:
>100_bases GCAGGGAATTTGCTTATGACAACAATGTCCTTCGCCCGCCCTAACCAAGGGTATACCCTCTCGTCTTTGCCTTTGCCGGC CGCTTTCCGGTTTCCCCCGC
Downstream 100 bases:
>100_bases ACGGGCAAGCGGTCGCGAACCTCAATCGGGCTGGGGCCGCAATTCAGGGTTTCCATGAGGTCGTGGCGCCGGGGCAAGCC CCAAGTTGACAGCGACGTGA
Product: ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPAFTLPALSARLLRARRSLAAVALAAMSAAALTPALASTQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVD LCLRAAEAARQQLGLKDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVAFSVSHYVSTVRMLVRADSGIRSF GDLRGKTVVTSAGSTGDRHVRRMKAQYGYHDVYAKDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQYVIVGPALS VEQNALMLSKADPEWKRLVDQALANTFAGPEVTALQKRWFQQPIGSRGINLALAPSGEVRAAWKHPSDAVTE
Sequences:
>Translated_312_residues MPAFTLPALSARLLRARRSLAAVALAAMSAAALTPALASTQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVD LCLRAAEAARQQLGLKDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVAFSVSHYVSTVRMLVRADSGIRSF GDLRGKTVVTSAGSTGDRHVRRMKAQYGYHDVYAKDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQYVIVGPALS VEQNALMLSKADPEWKRLVDQALANTFAGPEVTALQKRWFQQPIGSRGINLALAPSGEVRAAWKHPSDAVTE >Mature_311_residues PAFTLPALSARLLRARRSLAAVALAAMSAAALTPALASTQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVDL CLRAAEAARQQLGLKDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVAFSVSHYVSTVRMLVRADSGIRSFG DLRGKTVVTSAGSTGDRHVRRMKAQYGYHDVYAKDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQYVIVGPALSV EQNALMLSKADPEWKRLVDQALANTFAGPEVTALQKRWFQQPIGSRGINLALAPSGEVRAAWKHPSDAVTE
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=267, Percent_Identity=40.8239700374532, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI1788228, Length=268, Percent_Identity=26.1194029850746, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33733; Mature: 33602
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFTLPALSARLLRARRSLAAVALAAMSAAALTPALASTQSPVLDKIRESGTIVLGYRE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECC SALPFSFADDKGQPAGYAVDLCLRAAEAARQQLGLKDLKVRWMPLTPQNRIPAVVNGLVD CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCEEEEEECCCCCCCCHHHHCCEE LDCAPNTNSLERQKQVAFSVSHYVSTVRMLVRADSGIRSFGDLRGKTVVTSAGSTGDRHV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHH RRMKAQYGYHDVYAKDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQYVIVGPALS HHHHHHCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCEEEECCCCC VEQNALMLSKADPEWKRLVDQALANTFAGPEVTALQKRWFQQPIGSRGINLALAPSGEVR CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEE AAWKHPSDAVTE EECCCCCCCCCC >Mature Secondary Structure PAFTLPALSARLLRARRSLAAVALAAMSAAALTPALASTQSPVLDKIRESGTIVLGYRE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECC SALPFSFADDKGQPAGYAVDLCLRAAEAARQQLGLKDLKVRWMPLTPQNRIPAVVNGLVD CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCEEEEEECCCCCCCCHHHHCCEE LDCAPNTNSLERQKQVAFSVSHYVSTVRMLVRADSGIRSFGDLRGKTVVTSAGSTGDRHV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHH RRMKAQYGYHDVYAKDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQYVIVGPALS HHHHHHCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCEEEECCCCC VEQNALMLSKADPEWKRLVDQALANTFAGPEVTALQKRWFQQPIGSRGINLALAPSGEVR CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEE AAWKHPSDAVTE EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]