| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is treZ [H]
Identifier: 116695504
GI number: 116695504
Start: 1761541
End: 1763547
Strand: Direct
Name: treZ [H]
Synonym: H16_B1563
Alternate gene names: 116695504
Gene position: 1761541-1763547 (Clockwise)
Preceding gene: 116695503
Following gene: 116695505
Centisome position: 60.48
GC content: 72.4
Gene sequence:
>2007_bases TTGCACGCCAACCCGTTTCTGCTCGCCCCCGGCGCCCGCTCCGCCATGCCCAGCCTGGCCCCGCACGACTGCTTTGCAGC GCCCACTGCCGCCGGGCCGCTGGGCCTGCCCGGCAACGACGACAATGCGCACGACTACCTGTTCGGGCCGGCTTGGTTGC CGGACGGCCGCGTGCGGTTCCGCCTGTGGGCCCCGGACGCAGCCGAGCAAGGCCAGGCGGTACGGCTGGAGATCGCCGGG CTCGGTCCGGTGCGCATGGCGGCCGGCGCCAACGGCTGGTTCGAGGCCATCGTTCCGTGCTGCAATGGGGCACGCTACTG GTTCCGGCTTGACGACGGCACCACCGTGCCCGACCCGGCCTCGCGCTGCCAGGCCGACGATGTGCACGGGCCCAGCATCG TGCCCGCGCCCGACGCCGCCGGCGCCTTTGCGTGGGCGTGTTCGGACTGGCGCGGGCGCCCCTGGCATGAAGCCATCGTC TATGAGTTGCACGTGGGCCTGTGCGGCGGCTTTGCCGGCGCGGCGCAGCAGCTGCCGCGGCTGGCGGCGCTGGGCTTCAC CGCGGTCGAGCTGATGCCGGTGGCGGAGTTCCCCGGCACGCGCAACTGGGGCTATGACGGCGTGCTGCCGTTCGCGCCGG AGTCCGCCTACGGCACCCCGGACGAACTGCGCGCGCTGGTGGACCGCGCCCACCAGCTCGGCATGATGGTGCTGCTGGAC GTGGTCTACAACCACTTCGGGCCGGAGGGCAACTACCTGCACCGCTACGCCAGCGCGTTCTTCCGCGCGGACCGGCAGAC CCCGTGGGGGCCAGCCATCGATTTCCGCCGGCCGCAGGTGCGGCGCTTTTTCACCGAGAACGCGCGCTACTGGCTGGAGC AGTTCCGCTTCGACGGCCTGCGCCTGGACGCCGTGCACGCGATCGAGGACGAAGGCTGGCTGGCGGCGCTGCCCGGCGAG CTGCGCACCATGCTGGCCGAAGGCGACGGCGCCAGCCGCCATCTCCACCTGGTGCTGGAAAACGACAACAACGATGCCGA ACTGCTGGCCAAGGGCTACGACGCACAGTGGAACGATGACGCCCACCATGCCCTGCACGTGCTGCTGACCGGCGAGGGCG ACGGCTATTACTGCGACTACACCCGCTGCGCCGATGAGGGCGAGGATGCGCCCGCGGGGCGCGGCGAGCCCGCGCTGCGG CATCTTGCGCGCGTGCTGGGCGAAGGCTTTGCCTACCAGGGCGAGCTGTCGGCGCACCGCTCTGCCGCCGCGCCGGACGT GTCGTCAAGCGCGGACAGCGTGCGCCGCGGACAGCCCAGCGCGCACCTGCCGCCCACGGCCTTCGTCTGCTTCCTGCAGA ACCACGACCAGACCGGCAACCGCGCACTGGGCGACCGGCTGGCCGGCCTGGCGGACCGCAATGCGCTGCGCGCGGCGGTG GCGCTGCAGTTGCTGTGCCCGCAGGTGCCGCTGGTGTTCATGGGCGAGGAAACCGGCACGCAGCGGCCCTTCCTCTACTT CACCAGCCACCCGCCCGAACTGGCGCAGGCCGTGCGCGACGGCCGGCGCCGCGAGTTTGCGGCTTCCACGGCATTCCGCG ACGATGCGCGCGCCGCGGCCATCCCCGATCCCAACGACCCGGCCACCTTCGAGGCGTCGCGCCCCGAGCTGGAAGACGAC GGCGACTGGACCCCGTACTACCACGAGCTGCTCGCGGTGCGCCGCCGTGAACTGCTGGACCGGCTGGCCGGCTGCCAGTC GGCCGGCGTCGATATCCTGGGGCCGGCCGCGCTGTGCGCACGCTGGCGGCTGATGGACGGCATGGAGCTGAGCCTGTGGC TGAACCTGGGCAGCGAAGCCGTGCCATGCATGCGGCCATGCCACGACATGAGCGCGGCGCTGCATGAAAGCCTGCCCGGC GCCGCGGCCGAGCTGTCCGCGGGCATGCTGCCGCCGCTGGCCTGCGTCGCCACCATGTGCGAGCCCGCAGCGGCGCGCGC CAGATAA
Upstream 100 bases:
>100_bases GTTGTCCTGCGGGCATGGAGTTCGCATTGTGCCAAGACCGGCCATCCGGCCGGCTCTCCCTTGGCATTCCCCACGGCCGT CCCAAAGCCAGGAGCCGAAT
Downstream 100 bases:
>100_bases TGCCCGCCGGCTTGCCGGAATCCCTGCCAGGCAGCCATGGCGATGGCGATGGCGGCGACCATGACCTGCCCCGCGCCACC GCGCGGCTGCAGCTGCACCC
Product: glycosyl hydrolase
Products: NA
Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MHANPFLLAPGARSAMPSLAPHDCFAAPTAAGPLGLPGNDDNAHDYLFGPAWLPDGRVRFRLWAPDAAEQGQAVRLEIAG LGPVRMAAGANGWFEAIVPCCNGARYWFRLDDGTTVPDPASRCQADDVHGPSIVPAPDAAGAFAWACSDWRGRPWHEAIV YELHVGLCGGFAGAAQQLPRLAALGFTAVELMPVAEFPGTRNWGYDGVLPFAPESAYGTPDELRALVDRAHQLGMMVLLD VVYNHFGPEGNYLHRYASAFFRADRQTPWGPAIDFRRPQVRRFFTENARYWLEQFRFDGLRLDAVHAIEDEGWLAALPGE LRTMLAEGDGASRHLHLVLENDNNDAELLAKGYDAQWNDDAHHALHVLLTGEGDGYYCDYTRCADEGEDAPAGRGEPALR HLARVLGEGFAYQGELSAHRSAAAPDVSSSADSVRRGQPSAHLPPTAFVCFLQNHDQTGNRALGDRLAGLADRNALRAAV ALQLLCPQVPLVFMGEETGTQRPFLYFTSHPPELAQAVRDGRRREFAASTAFRDDARAAAIPDPNDPATFEASRPELEDD GDWTPYYHELLAVRRRELLDRLAGCQSAGVDILGPAALCARWRLMDGMELSLWLNLGSEAVPCMRPCHDMSAALHESLPG AAAELSAGMLPPLACVATMCEPAAARAR
Sequences:
>Translated_668_residues MHANPFLLAPGARSAMPSLAPHDCFAAPTAAGPLGLPGNDDNAHDYLFGPAWLPDGRVRFRLWAPDAAEQGQAVRLEIAG LGPVRMAAGANGWFEAIVPCCNGARYWFRLDDGTTVPDPASRCQADDVHGPSIVPAPDAAGAFAWACSDWRGRPWHEAIV YELHVGLCGGFAGAAQQLPRLAALGFTAVELMPVAEFPGTRNWGYDGVLPFAPESAYGTPDELRALVDRAHQLGMMVLLD VVYNHFGPEGNYLHRYASAFFRADRQTPWGPAIDFRRPQVRRFFTENARYWLEQFRFDGLRLDAVHAIEDEGWLAALPGE LRTMLAEGDGASRHLHLVLENDNNDAELLAKGYDAQWNDDAHHALHVLLTGEGDGYYCDYTRCADEGEDAPAGRGEPALR HLARVLGEGFAYQGELSAHRSAAAPDVSSSADSVRRGQPSAHLPPTAFVCFLQNHDQTGNRALGDRLAGLADRNALRAAV ALQLLCPQVPLVFMGEETGTQRPFLYFTSHPPELAQAVRDGRRREFAASTAFRDDARAAAIPDPNDPATFEASRPELEDD GDWTPYYHELLAVRRRELLDRLAGCQSAGVDILGPAALCARWRLMDGMELSLWLNLGSEAVPCMRPCHDMSAALHESLPG AAAELSAGMLPPLACVATMCEPAAARAR >Mature_668_residues MHANPFLLAPGARSAMPSLAPHDCFAAPTAAGPLGLPGNDDNAHDYLFGPAWLPDGRVRFRLWAPDAAEQGQAVRLEIAG LGPVRMAAGANGWFEAIVPCCNGARYWFRLDDGTTVPDPASRCQADDVHGPSIVPAPDAAGAFAWACSDWRGRPWHEAIV YELHVGLCGGFAGAAQQLPRLAALGFTAVELMPVAEFPGTRNWGYDGVLPFAPESAYGTPDELRALVDRAHQLGMMVLLD VVYNHFGPEGNYLHRYASAFFRADRQTPWGPAIDFRRPQVRRFFTENARYWLEQFRFDGLRLDAVHAIEDEGWLAALPGE LRTMLAEGDGASRHLHLVLENDNNDAELLAKGYDAQWNDDAHHALHVLLTGEGDGYYCDYTRCADEGEDAPAGRGEPALR HLARVLGEGFAYQGELSAHRSAAAPDVSSSADSVRRGQPSAHLPPTAFVCFLQNHDQTGNRALGDRLAGLADRNALRAAV ALQLLCPQVPLVFMGEETGTQRPFLYFTSHPPELAQAVRDGRRREFAASTAFRDDARAAAIPDPNDPATFEASRPELEDD GDWTPYYHELLAVRRRELLDRLAGCQSAGVDILGPAALCARWRLMDGMELSLWLNLGSEAVPCMRPCHDMSAALHESLPG AAAELSAGMLPPLACVATMCEPAAARAR
Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc
COG id: COG0296
COG function: function code G; 1,4-alpha-glucan branching enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI189458812, Length=164, Percent_Identity=34.7560975609756, Blast_Score=96, Evalue=7e-20, Organism=Escherichia coli, GI1789839, Length=165, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI2367229, Length=192, Percent_Identity=29.6875, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32564391, Length=169, Percent_Identity=33.1360946745562, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17554896, Length=169, Percent_Identity=33.1360946745562, Blast_Score=93, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6320826, Length=168, Percent_Identity=30.3571428571429, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI28573410, Length=164, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004193 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR015156 - InterPro: IPR012768 [H]
Pfam domain/function: PF09071 Alpha-amyl_C; PF00128 Alpha-amylase; PF02922 CBM_48 [H]
EC number: =3.2.1.141 [H]
Molecular weight: Translated: 72572; Mature: 72572
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHANPFLLAPGARSAMPSLAPHDCFAAPTAAGPLGLPGNDDNAHDYLFGPAWLPDGRVRF CCCCCEEECCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEE RLWAPDAAEQGQAVRLEIAGLGPVRMAAGANGWFEAIVPCCNGARYWFRLDDGTTVPDPA EEECCCCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHH SRCQADDVHGPSIVPAPDAAGAFAWACSDWRGRPWHEAIVYELHVGLCGGFAGAAQQLPR HHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEEEEEEHHHHCCHHHHHHHHHH LAALGFTAVELMPVAEFPGTRNWGYDGVLPFAPESAYGTPDELRALVDRAHQLGMMVLLD HHHHCCHHHHEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVYNHFGPEGNYLHRYASAFFRADRQTPWGPAIDFRRPQVRRFFTENARYWLEQFRFDGL HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE RLDAVHAIEDEGWLAALPGELRTMLAEGDGASRHLHLVLENDNNDAELLAKGYDAQWNDD EEEEEEEECCCCCEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHEECCCCCCCCC AHHALHVLLTGEGDGYYCDYTRCADEGEDAPAGRGEPALRHLARVLGEGFAYQGELSAHR CCEEEEEEEECCCCCEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCHHHH SAAAPDVSSSADSVRRGQPSAHLPPTAFVCFLQNHDQTGNRALGDRLAGLADRNALRAAV CCCCCCCCCCHHHHHCCCCCCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALQLLCPQVPLVFMGEETGTQRPFLYFTSHPPELAQAVRDGRRREFAASTAFRDDARAAA HHHHHCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCC IPDPNDPATFEASRPELEDDGDWTPYYHELLAVRRRELLDRLAGCQSAGVDILGPAALCA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCEECHHHHHH RWRLMDGMELSLWLNLGSEAVPCMRPCHDMSAALHESLPGAAAELSAGMLPPLACVATMC HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHH EPAAARAR CCHHHCCC >Mature Secondary Structure MHANPFLLAPGARSAMPSLAPHDCFAAPTAAGPLGLPGNDDNAHDYLFGPAWLPDGRVRF CCCCCEEECCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEE RLWAPDAAEQGQAVRLEIAGLGPVRMAAGANGWFEAIVPCCNGARYWFRLDDGTTVPDPA EEECCCCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHH SRCQADDVHGPSIVPAPDAAGAFAWACSDWRGRPWHEAIVYELHVGLCGGFAGAAQQLPR HHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEEEEEEHHHHCCHHHHHHHHHH LAALGFTAVELMPVAEFPGTRNWGYDGVLPFAPESAYGTPDELRALVDRAHQLGMMVLLD HHHHCCHHHHEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVYNHFGPEGNYLHRYASAFFRADRQTPWGPAIDFRRPQVRRFFTENARYWLEQFRFDGL HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE RLDAVHAIEDEGWLAALPGELRTMLAEGDGASRHLHLVLENDNNDAELLAKGYDAQWNDD EEEEEEEECCCCCEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHEECCCCCCCCC AHHALHVLLTGEGDGYYCDYTRCADEGEDAPAGRGEPALRHLARVLGEGFAYQGELSAHR CCEEEEEEEECCCCCEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCHHHH SAAAPDVSSSADSVRRGQPSAHLPPTAFVCFLQNHDQTGNRALGDRLAGLADRNALRAAV CCCCCCCCCCHHHHHCCCCCCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALQLLCPQVPLVFMGEETGTQRPFLYFTSHPPELAQAVRDGRRREFAASTAFRDDARAAA HHHHHCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCC IPDPNDPATFEASRPELEDDGDWTPYYHELLAVRRRELLDRLAGCQSAGVDILGPAALCA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCEECHHHHHH RWRLMDGMELSLWLNLGSEAVPCMRPCHDMSAALHESLPGAAAELSAGMLPPLACVATMC HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHH EPAAARAR CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8899719; 11427726 [H]