Click here to switch to the map view.

The map label for this gene is sufU [H]

Identifier: 116695457

GI number: 116695457

Start: 1702805

End: 1703251

Strand: Direct

Name: sufU [H]

Synonym: H16_B1516

Alternate gene names: 116695457

Gene position: 1702805-1703251 (Clockwise)

Preceding gene: 116695456

Following gene: 116695458

Centisome position: 58.47

GC content: 67.11

Gene sequence:

>447_bases
ATGTCTGACCTGCGCAGCCTCTACCAGGAAGTGGTTGTCGACCACAGCCGCTCGCCGCGCAATTTCGGGCGGCTGGCGGC
AGCGAACCGCAGCGCCGAGGGCTTCAACCCGCTGTGCGGCGACCGGCTGACGCTGTACCTGAGAATCCGCGACGCGGTGA
TCGAAGACGCCAGCTTCGAGGGCTCGGGCTGCGCCATCTCCACTGCCTCTGCGTCGCTGATGACGGAAGCGCTCAAAGGC
AAGACCGAGGCGCAGGCGCGGGCCTTGTTCTGCGGCTTCCACGCGCTGGTCACCGGAAAGCCGGGGCAGTCCGAAGTGCC
GATGGGAAAGCTGGAAGTCCTGGCCGGCGTGCGCGAGTTCCCGGCGCGCGTGAAGTGCGCCACCCTGGCCTGGCATACCA
TGCAAGCCGCTTTGGAGAACAGCGCCAGGCCGGTCTCAACGGAGTAG

Upstream 100 bases:

>100_bases
TGCCCGCCACGGTGCGCGCTTCCTTCGCGCTGTACAACACGCGTGAAGAGGTGGATGCACTGTTTGCTGCCGTGCGCGCG
GCACAGGAGGTATTCGCCTG

Downstream 100 bases:

>100_bases
AACCCCATGAGCATGATCGATTGGCTGCACAAGGCCAGGGAACACGAAGACAGGTTCGAGGCTGAGCCGGACAGCCTCGA
GGGGCGGGTGATAGCGGCCT

Product: iron sulfur cluster assembly protein (SufU)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSDLRSLYQEVVVDHSRSPRNFGRLAAANRSAEGFNPLCGDRLTLYLRIRDAVIEDASFEGSGCAISTASASLMTEALKG
KTEAQARALFCGFHALVTGKPGQSEVPMGKLEVLAGVREFPARVKCATLAWHTMQAALENSARPVSTE

Sequences:

>Translated_148_residues
MSDLRSLYQEVVVDHSRSPRNFGRLAAANRSAEGFNPLCGDRLTLYLRIRDAVIEDASFEGSGCAISTASASLMTEALKG
KTEAQARALFCGFHALVTGKPGQSEVPMGKLEVLAGVREFPARVKCATLAWHTMQAALENSARPVSTE
>Mature_147_residues
SDLRSLYQEVVVDHSRSPRNFGRLAAANRSAEGFNPLCGDRLTLYLRIRDAVIEDASFEGSGCAISTASASLMTEALKGK
TEAQARALFCGFHALVTGKPGQSEVPMGKLEVLAGVREFPARVKCATLAWHTMQAALENSARPVSTE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Escherichia coli, GI1788878, Length=135, Percent_Identity=31.8518518518519, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 15914; Mature: 15783

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLRSLYQEVVVDHSRSPRNFGRLAAANRSAEGFNPLCGDRLTLYLRIRDAVIEDASFE
CHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCC
GSGCAISTASASLMTEALKGKTEAQARALFCGFHALVTGKPGQSEVPMGKLEVLAGVREF
CCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHC
PARVKCATLAWHTMQAALENSARPVSTE
CCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDLRSLYQEVVVDHSRSPRNFGRLAAANRSAEGFNPLCGDRLTLYLRIRDAVIEDASFE
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCC
GSGCAISTASASLMTEALKGKTEAQARALFCGFHALVTGKPGQSEVPMGKLEVLAGVREF
CCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHC
PARVKCATLAWHTMQAALENSARPVSTE
CCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]