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The map label for this gene is sufD [C]

Identifier: 116695455

GI number: 116695455

Start: 1700209

End: 1701540

Strand: Direct

Name: sufD [C]

Synonym: H16_B1514

Alternate gene names: 116695455

Gene position: 1700209-1701540 (Clockwise)

Preceding gene: 116695454

Following gene: 116695456

Centisome position: 58.38

GC content: 67.64

Gene sequence:

>1332_bases
ATGAGCGCAAGCGGACTGGAGCACTATCTCGCCGAGTTCGCCCGCGTCGAGGCCGCACTGCCCGGCCGCCGTCTGGGCTG
GCTTGCGCACGCGCGGCGGCAGGCGCTGGATCATTTCGCCCAGGCCGGGTTCCCCACGCTGCGCCACGAGGACTGGAAAT
ACACCAGCGTGGCCGCACTCGAGCGAAGCCGCTTTGCCGTGGCACTGCCGCAGGCCGGCGACAGCCCGGACCCCGCGGTG
GCAGCCCAGATCGAGGCGCTTGCCCTGGCCGGCGCGCAGCTGATGGTGTTCGTCAATGGCACGCACCAGCCGCAATGGTC
GCGCATCGGCACCCTGCCTGCGGGCATCGAGCTGGCCAGCCTCGCCGCGACGCTGGAGCGCGCGCCGGACTGCCTGGAAG
CGCTGCTGTTGTGTCGCACAAGCGACTACCCGTCCGGCTTCGCCGCCTTGAACATGGCGTTCATGACCGACGGTGCCTAT
ATCCGCGTGGCGGCCGGCACCGTCCCGGAACAACCGATCCACTTGCTGTTCCTTGCCACCGCTGCCGAACTGGCAACCCA
TGCGCGCAACCTCGTGGTGGCGCAAGCCGGCAGCCAGGTCTGCATCGTGGAGCACCACGCCGGCCTGGATGGCCTGGCCT
ATTGCACCAATACCATCACTGACATCGTTGCCGAGCGTGATGCGCAGGTCGAACATCACAAGCTGCAGCAGGAGAGCCTC
AAGGCCTTCCATATCGCCGGCGTGAACCTGGACCAGCGGCAGGGTAGCCGCTGCGCCTCCAGTTCCTTTGCCCTGGGCGG
CGCCCTGGCGCGGGTCGACATCAATGTCGGGCTGAATGCCGAGCATACCGAGTGTTCGCTGGACGGGCTGTATATGACCG
CCGGGCGGCAGCATGTCGACCACCACACCCGCGTCGACCACGCCAGCCCGCACAGCAAGAGCCGCGAGTTGTACAAGGGC
GTACTGGCGGGCGCCTCGCGCGCCGTCTTCAACGGCAAGGTGGTAGTGCATGCCGATGCCCAGCACAGCGATGCGCACCA
GTCCAACCGCAATCTGCTGCTGTCCGACCAGGCCGAGGTCGACACCAAGCCGCAACTGGAGATCTATGCCGACGACGTCA
AATGCGGCCACGGCGCCACCGTCGGCCAGCTCGACGCCGAGCAGATCTACTACCTGCGCTCGCGCGGGATGGACGATGCC
GCGGCGCGTGCGCTGCTGACCTTTGCCTTCGCCGAAGAGGTCGTCAGGCGGCTCGGCCCTGCCCCATTGCGCACGCGGCT
GGAAACGCTCTTGCGCGGCAAGCTGCCGGAGCCTGTGAAGGAGCTGCCATGA

Upstream 100 bases:

>100_bases
AGGTCCACGTGCTTGCGCAAGGCCGCATCGCCAGGTCCGGCGGGCCGGAGCTGGCGCGCGAACTGGAGCGGCACGGCTAT
GCCGCGATGGAGTCTTCGAC

Downstream 100 bases:

>100_bases
ACACGGCTGCGCATGAACGGATGGCCGTGGAGCACGCGGTGCCGGCCGCCAGCCTGGAGGTGGAGCGGCTGCGGAAGGAT
TTCCCGATCCTGCGCCAGAC

Product: iron sulfur cluster assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSASGLEHYLAEFARVEAALPGRRLGWLAHARRQALDHFAQAGFPTLRHEDWKYTSVAALERSRFAVALPQAGDSPDPAV
AAQIEALALAGAQLMVFVNGTHQPQWSRIGTLPAGIELASLAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAY
IRVAAGTVPEQPIHLLFLATAAELATHARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESL
KAFHIAGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVDHHTRVDHASPHSKSRELYKG
VLAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEVDTKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDA
AARALLTFAFAEEVVRRLGPAPLRTRLETLLRGKLPEPVKELP

Sequences:

>Translated_443_residues
MSASGLEHYLAEFARVEAALPGRRLGWLAHARRQALDHFAQAGFPTLRHEDWKYTSVAALERSRFAVALPQAGDSPDPAV
AAQIEALALAGAQLMVFVNGTHQPQWSRIGTLPAGIELASLAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAY
IRVAAGTVPEQPIHLLFLATAAELATHARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESL
KAFHIAGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVDHHTRVDHASPHSKSRELYKG
VLAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEVDTKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDA
AARALLTFAFAEEVVRRLGPAPLRTRLETLLRGKLPEPVKELP
>Mature_442_residues
SASGLEHYLAEFARVEAALPGRRLGWLAHARRQALDHFAQAGFPTLRHEDWKYTSVAALERSRFAVALPQAGDSPDPAVA
AQIEALALAGAQLMVFVNGTHQPQWSRIGTLPAGIELASLAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAYI
RVAAGTVPEQPIHLLFLATAAELATHARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESLK
AFHIAGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVDHHTRVDHASPHSKSRELYKGV
LAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEVDTKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDAA
ARALLTFAFAEEVVRRLGPAPLRTRLETLLRGKLPEPVKELP

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=400, Percent_Identity=32.5, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI87081955, Length=322, Percent_Identity=21.1180124223602, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 47801; Mature: 47669

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASGLEHYLAEFARVEAALPGRRLGWLAHARRQALDHFAQAGFPTLRHEDWKYTSVAAL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
ERSRFAVALPQAGDSPDPAVAAQIEALALAGAQLMVFVNGTHQPQWSRIGTLPAGIELAS
HHCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCCHHHHH
LAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAYIRVAAGTVPEQPIHLLFLAT
HHHHHHHCHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCEEEEEECCCCCCCEEEEHHHH
AAELATHARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESL
HHHHHHHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
KAFHIAGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVD
CEEEEECCCCHHHCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCHHHC
HHTRVDHASPHSKSRELYKGVLAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEV
HHCCCCCCCCCHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCCHHCCCCEEEECCCCC
DTKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDAAARALLTFAFAEEVVRRLGP
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
APLRTRLETLLRGKLPEPVKELP
CHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
SASGLEHYLAEFARVEAALPGRRLGWLAHARRQALDHFAQAGFPTLRHEDWKYTSVAAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
ERSRFAVALPQAGDSPDPAVAAQIEALALAGAQLMVFVNGTHQPQWSRIGTLPAGIELAS
HHCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCCHHHHH
LAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAYIRVAAGTVPEQPIHLLFLAT
HHHHHHHCHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCEEEEEECCCCCCCEEEEHHHH
AAELATHARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESL
HHHHHHHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
KAFHIAGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVD
CEEEEECCCCHHHCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCHHHC
HHTRVDHASPHSKSRELYKGVLAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEV
HHCCCCCCCCCHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCCHHCCCCEEEECCCCC
DTKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDAAARALLTFAFAEEVVRRLGP
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
APLRTRLETLLRGKLPEPVKELP
CHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]